A Process Modelling Framework Based on Point Interval Temporal Logic with an Application to Modelling Patient Flows

This thesis considers an application of a temporal theory to describe and model the patient journey in the hospital accident and emergency (A&E) department. The aim is to introduce a generic but dynamic method applied to any setting, including healthcare. Constructing a consistent process model can be instrumental in streamlining healthcare issues. Current process modelling techniques used in healthcare such as flowcharts, unified modelling language activity diagram (UML AD), and business process modelling notation (BPMN) are intuitive and imprecise. They cannot fully capture the complexities of the types of activities and the full extent of temporal constraints to an extent where one could reason about the flows. Formal approaches such as Petri have also been reviewed to investigate their applicability to the healthcare domain to model processes. Additionally, to schedule patient flows, current modelling standards do not offer any formal mechanism, so healthcare relies on critical path method (CPM) and program evaluation review technique (PERT), that also have limitations, i.e. finish-start barrier. It is imperative to specify the temporal constraints between the start and/or end of a process, e.g., the beginning of a process A precedes the start (or end) of a process B. However, these approaches failed to provide us with a mechanism for handling these temporal situations. If provided, a formal representation can assist in effective knowledge representation and quality enhancement concerning a process. Also, it would help in uncovering complexities of a system and assist in modelling it in a consistent way which is not possible with the existing modelling techniques. The above issues are addressed in this thesis by proposing a framework that would provide a knowledge base to model patient flows for accurate representation based on point interval temporal logic (PITL) that treats point and interval as primitives. These objects would constitute the knowledge base for the formal description of a system. With the aid of the inference mechanism of the temporal theory presented here, exhaustive temporal constraints derived from the proposed axiomatic system’ components serves as a knowledge base. The proposed methodological framework would adopt a model-theoretic approach in which a theory is developed and considered as a model while the corresponding instance is considered as its application. Using this approach would assist in identifying core components of the system and their precise operation representing a real-life domain deemed suitable to the process modelling issues specified in this thesis. Thus, I have evaluated the modelling standards for their most-used terminologies and constructs to identify their key components. It will also assist in the generalisation of the critical terms (of process modelling standards) based on their ontology. A set of generalised terms proposed would serve as an enumeration of the theory and subsume the core modelling elements of the process modelling standards. The catalogue presents a knowledge base for the business and healthcare domains, and its components are formally defined (semantics). Furthermore, a resolution theorem-proof is used to show the structural features of the theory (model) to establish it is sound and complete. After establishing that the theory is sound and complete, the next step is to provide the instantiation of the theory. This is achieved by mapping the core components of the theory to their corresponding instances. Additionally, a formal graphical tool termed as point graph (PG) is used to visualise the cases of the proposed axiomatic system. PG facilitates in modelling, and scheduling patient flows and enables analysing existing models for possible inaccuracies and inconsistencies supported by a reasoning mechanism based on PITL. Following that, a transformation is developed to map the core modelling components of the standards into the extended PG (PG*) based on the semantics presented by the axiomatic system. A real-life case (from the King’s College hospital accident and emergency (A&E) department’s trauma patient pathway) is considered to validate the framework. It is divided into three patient flows to depict the journey of a patient with significant trauma, arriving at A&E, undergoing a procedure and subsequently discharged. Their staff relied upon the UML-AD and BPMN to model the patient flows. An evaluation of their representation is presented to show the shortfalls of the modelling standards to model patient flows. The last step is to model these patient flows using the developed approach, which is supported by enhanced reasoning and scheduling

Semantics and Verification of UML Activity Diagrams for Workflow Modelling

This thesis defines a formal semantics for UML activity diagrams that is suitable for workflow modelling. The semantics allows verification of functional requirements using model checking. Since a workflow specification prescribes how a workflow system behaves, the semantics is defined and motivated in terms of workflow systems. As workflow systems are reactive and coordinate activities, the defined semantics reflects these aspects. In fact, two formal semantics are defined, which are completely different. Both semantics are defined directly in terms of activity diagrams and not by a mapping of activity diagrams to some existing formal notation. The requirements-level semantics, based on the Statemate semantics of statecharts, assumes that workflow systems are infinitely fast w.r.t. their environment and react immediately to input events (this assumption is called the perfect synchrony hypothesis). The implementation-level semantics, based on the UML semantics of statecharts, does not make this assumption. Due to the perfect synchrony hypothesis, the requirements-level semantics is unrealistic, but easy to use for verification. On the other hand, the implementation-level semantics is realistic, but difficult to use for verification. A class of activity diagrams and a class of functional requirements is identified for which the outcome of the verification does not depend upon the particular semantics being used, i.e., both semantics give the same result. For such activity diagrams and such functional requirements, the requirements-level semantics is as realistic as the implementation-level semantics, even though the requirements-level semantics makes the perfect synchrony hypothesis. The requirements-level semantics has been implemented in a verification tool. The tool interfaces with a model checker by translating an activity diagram into an input for a model checker according to the requirements-level semantics. The model checker checks the desired functional requirement against the input model. If the model checker returns a counterexample, the tool translates this counterexample back into the activity diagram by highlighting a path corresponding to the counterexample. The tool supports verification of workflow models that have event-driven behaviour, data, real time, and loops. Only model checkers supporting strong fairness model checking turn out to be useful. The feasibility of the approach is demonstrated by using the tool to verify some real-life workflow models

On formalizing UML2 activities using TPNets: case studies

ABSTRACT: Transactional Petri Nets (TPNets) are a new class of high-level Zero-Safe Nets (ZSNs), defined as a more suitable semantic framework for UML2 activity diagrams. Indeed, they ensure reactivity and synchronization of concurrent flows triggering with their junction. Reactivity is guaranteed due to the real time massive cancellation semantics based on the definition of new dynamic enabling rules and the imposed priority among executions. Global synchronization in turn is assured thanks to non-locality principle, an outcome of exploiting atomic stable transactions. Rewriting logic is defined as the operational semantics framework of TPNets

Simulation Modelling Practice and Theory

The influx of data in the world today needs analysis that no one method can handle. Some reports estimated the influx of data would reach 163 zitabytes by 2025, hence the need for simulation and modeling theory and practice. Simulation and modeling tools and techniques are most important in this day and age. While simulation carries the needed work, tools for visualizing the results help in the decision-making process. Simulation ranges from a simple queue to molecular dynamics, including seismic reliability analysis, structural integrity assessment, games, reliability engineering, and system safety. This book will introduce practitioners, researchers, and novice users to simulation and modeling, and to the world of imagination

Modelling Security of Critical Infrastructures: A Survivability Assessment

Critical infrastructures, usually designed to handle disruptions caused by human errors or random acts of nature, define assets whose normal operation must be guaranteed to maintain its essential services for human daily living. Malicious intended attacks to these targets need to be considered during system design. To face these situations, defence plans must be developed in advance. In this paper, we present a Unified Modelling Language profile, named SecAM, that enables the modelling and security specification for critical infrastructures during the early phases (requirements, design) of system development life cycle. SecAM enables security assessment, through survivability analysis, of different security solutions before system deployment. As a case study, we evaluate the survivability of the Saudi Arabia crude-oil network under two different attack scenarios. The stochastic analysis, carried out with Generalized Stochastic Petri nets, quantitatively estimates the minimization of attack damages on the crude-oil network

Process mining using BPMN : relating event logs and process models

Process-aware information systems (PAIS) are systems relying on processes, which involve human and software resources to achieve concrete goals. There is a need to develop approaches for modeling, analysis, improvement and monitoring processes within PAIS. These approaches include process mining techniques used to discover process models from event logs, find log and model deviations, and analyze performance characteristics of processes. The representational bias (a way to model processes) plays an important role in process mining. The BPMN 2.0 (Business Process Model and Notation) standard is widely used and allows to build conventional and understandable process models. In addition to the flat control flow perspective, subprocesses, data flows, resources can be integrated within one BPMN diagram. This makes BPMN very attractive for both process miners and business users. In this paper, we describe and justify robust control flow conversion algorithms, which provide the basis for more advanced BPMN-based discovery and conformance checking algorithms. We believe that the results presented in this paper can be used for a wide variety of BPMN mining and conformance checking algorithms. We also provide metrics for the processes discovered before and after the conversion to BPMN structures. Cases for which conversion algorithms produce more compact or more involved BPMN models in comparison with the initial models are identified. Keywords: Process mining; Process discovery; Conformance checking; BPMN (Business Process Model and Notation); Petri nets; Bisimulatio