Generalized Deduplication: Bounds, Convergence, and Asymptotic Properties

We study a generalization of deduplication, which enables lossless deduplication of highly similar data and show that standard deduplication with fixed chunk length is a special case. We provide bounds on the expected length of coded sequences for generalized deduplication and show that the coding has asymptotic near-entropy cost under the proposed source model. More importantly, we show that generalized deduplication allows for multiple orders of magnitude faster convergence than standard deduplication. This means that generalized deduplication can provide compression benefits much earlier than standard deduplication, which is key in practical systems. Numerical examples demonstrate our results, showing that our lower bounds are achievable, and illustrating the potential gain of using the generalization over standard deduplication. In fact, we show that even for a simple case of generalized deduplication, the gain in convergence speed is linear with the size of the data chunks.Comment: 15 pages, 4 figures. This is the full version of a paper accepted for GLOBECOM 201

An adaptive column compression family for self-driving databases

Modern in-memory databases are typically used for high-performance workloads, therefore they have to be optimized for small memory footprint and high query speed at the same time. Data compression has the potential to reduce memory requirements but often reduces query speed too. In this paper we propose a novel, adaptive compressor that offers a new trade-off point of these dimensions, achieving better compression than LZ4 while reaching query speeds close to the fastest existing segment encoders. We evaluate our compressor both with synthetic data in isolation and on the TPC-H and Join Order Benchmarks, integrated into a modern relational column store, Hyrise

L2C: Combining Lossy and Lossless Compression on Memory and I/O

In this paper we introduce L2C, a hybrid lossy/lossless compression scheme applicable both to the memory subsystem and I/O traffic of a processor chip. L2C employs general-purpose lossless compression and combines it with state of the art lossy compression to achieve compression ratios up to 16:1 and improve the utilization of chip\u27s bandwidth resources. Compressing memory traffic yields lower memory access time, improving system performance and energy efficiency. Compressing I/O traffic offers several benefits for resource-constrained systems, including more efficient storage and networking.We evaluate L2C as a memory compressor in simulation with a set of approximation-tolerant applications. L2C improves baseline execution time by an average of 50\%, and total system energy consumption by 16%. Compared to the lossy and lossless current state of the art memory compression approaches, L2C improves execution time by 9% and 26% respectively, and reduces system energy costs by 3% and 5%, respectively.I/O compression efficacy is evaluated using a set of real-life datasets. L2C achieves compression ratios of up to 10.4:1 for a single dataset and on average about 4:1, while introducing no more than 0.4% error

Lossy and Lossless Compression Techniques to Improve the Utilization of Memory Bandwidth and Capacity

Main memory is a critical resource in modern computer systems and is in increasing demand. An increasing number of on-chip cores and specialized accelerators improves the potential processing throughput but also calls for higher data rates and greater memory capacity. In addition, new emerging data-intensive applications further increase memory traffic and footprint. On the other hand, memory bandwidth is pin limited and power constrained and is therefore more difficult to scale. Memory capacity is limited by cost and energy considerations.This thesis proposes a variety of memory compression techniques as a means to reduce the memory bottleneck. These techniques target two separate problems in the memory hierarchy: memory bandwidth and memory capacity. In order to reduce transferred data volumes, lossy compression is applied which is able to reach more aggressive compression ratios. A reduction of off-chip memory traffic leads to reduced memory latency, which in turn improves the performance and energy efficiency of the system. To improve memory capacity, a novel approach to memory compaction is presented.The first part of this thesis introduces Approximate Value Reconstruction (AVR), which combines a low-complexity downsampling compressor with an LLC design able to co-locate compressed and uncompressed data. Two separate thresholds limit the error introduced by approximation. For applications that tolerate aggressive approximation in large fractions of their data, in a system with 1GB of 1600MHz DDR4 per core and 1MB of LLC space per core, AVR reduces memory traffic by up to 70%, execution time by up to 55%, and energy costs by up to 20% introducing at most 1.2% error in the application output.The second part of this thesis proposes Memory Squeeze (MemSZ), introducing a parallelized implementation of the more advanced Squeeze (SZ) compression method. Furthermore, MemSZ improves on the error limiting capability of AVR by keeping track of life-time accumulated error. An alternate memory compression architecture is also proposed, which utilizes 3D-stacked DRAM as a last-level cache. In a system with 1GB of 800MHz DDR4 per core and 1MB of LLC space per core, MemSZ improves execution time, energy and memory traffic over AVR by up to 15%, 9%, and 64%, respectively.The third part of the thesis describes L2C, a hybrid lossy and lossless memory compression scheme. L2C applies lossy compression to approximable data, and falls back to lossless if an error threshold is exceeded. In a system with 4GB of 800MHz DDR4 per core and 1MB of LLC space per core, L2C improves on the performance of MemSZ by 9%, and energy consumption by 3%.The fourth and final contribution is FlatPack, a novel memory compaction scheme. FlatPack is able to reduce the traffic overhead compared to other memory compaction systems, thus retaining the bandwidth benefits of compression. Furthermore, FlatPack is flexible to changes in block compressibility both over time and between adjacent blocks. When available memory corresponds to 50% of the application footprint, in a system with 4GB of 800MHz DDR4 per core and 1MB of LLC space per core, FlatPack increases system performance compared to current state-of-the-art designs by 36%, while reducing system energy consumption by 12%

Data Reduction and Deep-Learning Based Recovery for Geospatial Visualization and Satellite Imagery

The storage, retrieval and distribution of data are some critical aspects of big data management. Data scientists and decision-makers often need to share large datasets and make decisions on archiving or deleting historical data to cope with resource constraints. As a consequence, there is an urgency of reducing the storage and transmission requirement. A potential approach to mitigate such problems is to reduce big datasets into smaller ones, which will not only lower storage requirements but also allow light load transfer over the network. The high dimensional data often exhibit high repetitiveness and paradigm across different dimensions. Carefully prepared data by removing redundancies, along with a machine learning model capable of reconstructing the whole dataset from its reduced version, can improve the storage scalability, data transfer, and speed up the overall data management pipeline. In this thesis, we explore some data reduction strategies for big datasets, while ensuring that the data can be transferred and used ubiquitously by all stakeholders, i.e., the entire dataset can be reconstructed with high quality whenever necessary. One of our data reduction strategies follows a straightforward uniform pattern, which guarantees a minimum of 75% data size reduction. We also propose a novel variance based reduction technique, which focuses on removing only redundant data and offers additional 1% to 2% deletion rate. We have adopted various traditional machine learning and deep learning approaches for high-quality reconstruction. We evaluated our pipelines with big geospatial data and satellite imageries. Among them, our deep learning approaches have performed very well both quantitatively and qualitatively with the capability of reconstructing high quality features. We also show how to leverage temporal data for better reconstruction. For uniform deletion, the reconstruction accuracy observed is as high as 98.75% on an average for spatial meteorological data (e.g., soil moisture and albedo), and 99.09% for satellite imagery. Pushing the deletion rate further by following variance based deletion method, the decrease in accuracy remains within 1% for spatial meteorological data and 7% for satellite imagery

High-throughput variable-to-fixed entropy codec using selective, stochastic code forests

Efficient high-throughput (HT) compression algorithms are paramount to meet the stringent constraints of present and upcoming data storage, processing, and transmission systems. In particular, latency, bandwidth and energy requirements are critical for those systems. Most HT codecs are designed to maximize compression speed, and secondarily to minimize compressed lengths. On the other hand, decompression speed is often equally or more critical than compression speed, especially in scenarios where decompression is performed multiple times and/or at critical parts of a system. In this work, an algorithm to design variable-to-fixed (VF) codes is proposed that prioritizes decompression speed. Stationary Markov analysis is employed to generate multiple, jointly optimized codes (denoted code forests). Their average compression efficiency is on par with the state of the art in VF codes, e.g., within 1% of Yamamoto et al.\u27s algorithm. The proposed code forest structure enables the implementation of highly efficient codecs, with decompression speeds 3.8 times faster than other state-of-the-art HT entropy codecs with equal or better compression ratios for natural data sources. Compared to these HT codecs, the proposed forests yields similar compression efficiency and speeds