Global Grids and Software Toolkits: A Study of Four Grid Middleware Technologies

Grid is an infrastructure that involves the integrated and collaborative use of computers, networks, databases and scientific instruments owned and managed by multiple organizations. Grid applications often involve large amounts of data and/or computing resources that require secure resource sharing across organizational boundaries. This makes Grid application management and deployment a complex undertaking. Grid middlewares provide users with seamless computing ability and uniform access to resources in the heterogeneous Grid environment. Several software toolkits and systems have been developed, most of which are results of academic research projects, all over the world. This chapter will focus on four of these middlewares--UNICORE, Globus, Legion and Gridbus. It also presents our implementation of a resource broker for UNICORE as this functionality was not supported in it. A comparison of these systems on the basis of the architecture, implementation model and several other features is included.Comment: 19 pages, 10 figure

The Java CoG kit grid desktop : a simple and central approach to grid computing using the graphical desktop paradigm.

Grid computing is evolving as a service based, flexible and secure resource sharing environment. Currently, with the help of Grid middleware toolkits, Grids are exposing their services through programming models and command line interfaces, requiring much technical knowledge of the backend Grid systems. Grid portals also exist, but fall short on integrating with native environments and maintaining a uniform user interface from portal to portal. In order to gain wider acceptance within the large and less technical oriented user communities, we need a homogeneous graphical user environment that supports the challenging task of providing Grid users an easy to use, seamless and transparent interface requiring minimal user participation. Motivated by the needs of these users, we are presenting the Grid Desktop based on the popularity of the graphical desktop paradigms such as KDE and Windows XP. The Java CoG Kit Grid Desktop is a user centric workspace that enhances the normal operating system desktop paradigm by interlacing Grid concepts and leveraging commodity technologies like Java. The Grid Desktop contributes to the Java CoG Kit architecture and delivers ubiquitous computing through the Java CoG Kit abstractions, portability through XML and Java Web start technologies, and a simple user interface by following the vastly popular desktop patterns such as drag-n-drop

An environment for workflow applications on wide-area distributed systems

©2001 IEEE. Personal use of this material is permitted. However, permission to reprint/republish this material for advertising or promotional purposes or for creating new collective works for resale or redistribution to servers or lists, or to reuse any copyrighted component of this work in other works must be obtained from the IEEE.Workflow techniques are emerging as an important approach for the specification and management of complex processing tasks. This approach is especially powerful for utilising distributed data and processing resources in widely-distributed heterogeneous systems. We describe our DISCWorld distributed workflow environment for composing complex processing chains, which are specified as a directed acyclic graph of operators. Users of our system can formulate processing chains using either graphical or scripting tools. We have deployed our system for image processing applications and decision support systems. We describe the technologies we have developed to enable the execution of these processing chains across wide-area computing systems. In particular, we present our Distributed Job Placement Language (based on XML) and various Java interface approaches we have developed for implementing the workflow metaphor. We outline a number of key issues for implementing a high-performance, reliable, distributed workflow management system.James, H.A.; Hawick, K.A.; Coddington, P.D

Extending and Implementing the Self-adaptive Virtual Processor for Distributed Memory Architectures

Many-core architectures of the future are likely to have distributed memory organizations and need fine grained concurrency management to be used effectively. The Self-adaptive Virtual Processor (SVP) is an abstract concurrent programming model which can provide this, but the model and its current implementations assume a single address space shared memory. We investigate and extend SVP to handle distributed environments, and discuss a prototype SVP implementation which transparently supports execution on heterogeneous distributed memory clusters over TCP/IP connections, while retaining the original SVP programming model

Enhancing reliability with Latin Square redundancy on desktop grids.

Computational grids are some of the largest computer systems in existence today. Unfortunately they are also, in many cases, the least reliable. This research examines the use of redundancy with permutation as a method of improving reliability in computational grid applications. Three primary avenues are explored - development of a new redundancy model, the Replication and Permutation Paradigm (RPP) for computational grids, development of grid simulation software for testing RPP against other redundancy methods and, finally, running a program on a live grid using RPP. An important part of RPP involves distributing data and tasks across the grid in Latin Square fashion. Two theorems and subsequent proofs regarding Latin Squares are developed. The theorems describe the changing position of symbols between the rows of a standard Latin Square. When a symbol is missing because a column is removed the theorems provide a basis for determining the next row and column where the missing symbol can be found. Interesting in their own right, the theorems have implications for redundancy. In terms of the redundancy model, the theorems allow one to state the maximum makespan in the face of missing computational hosts when using Latin Square redundancy. The simulator software was developed and used to compare different data and task distribution schemes on a simulated grid. The software clearly showed the advantage of running RPP, which resulted in faster completion times in the face of computational host failures. The Latin Square method also fails gracefully in that jobs complete with massive node failure while increasing makespan. Finally an Inductive Logic Program (ILP) for pharmacophore search was executed, using a Latin Square redundancy methodology, on a Condor grid in the Dahlem Lab at the University of Louisville Speed School of Engineering. All jobs completed, even in the face of large numbers of randomly generated computational host failures

Data Access in Wide Area Networks of Heterogeneous Workstations

The accessibility of data in wide area networks can be difficult. This research shows the use of the Internet Backplane Protocol (IBP) along with a modified version of the C standard I/O library that can allow data to be easily accessible without having to make major modifications to legacy code. In fact if legacy programs only use standard input and output routines, they need only be recompiled to effect a homogeneous file system. It also demonstrates that this access is predictable enough to make decisions on what data to access and in what fashion that access is most effective

Geoprocessing Optimization in Grids

Geoprocessing is commonly used in solving problems across disciplines which feature geospatial data and/or phenomena. Geoprocessing requires specialized algorithms and more recently, due to large volumes of geospatial databases and complex geoprocessing operations, it has become data- and/or compute-intensive. The conventional approach, which is predominately based on centralized computing solutions, is unable to handle geoprocessing efficiently. To that end, there is a need for developing distributed geoprocessing solutions by taking advantage of existing and emerging advanced techniques and high-performance computing and communications resources. As an emerging new computing paradigm, grid computing offers a novel approach for integrating distributed computing resources and supporting collaboration across networks, making it suitable for geoprocessing. Although there have been research efforts applying grid computing in the geospatial domain, there is currently a void in the literature for a general geoprocessing optimization. In this research, a new optimization technique for geoprocessing in grid systems, Geoprocessing Optimization in Grids (GOG), is designed and developed. The objective of GOG is to reduce overall response time with a reasonable cost. To meet this objective, GOG contains a set of algorithms, including a resource selection algorithm and a parallelism processing algorithm, to speed up query execution. GOG is validated by comparing its optimization time and estimated costs of generated execution plans with two existing optimization techniques. A proof of concept based on an application in air quality control is developed to demonstrate the advantages of GOG

Evaluation of Distributed Programming Models and Extensions to Task-based Runtime Systems

High Performance Computing (HPC) has always been a key foundation for scientific simulation and discovery. And more recently, deep learning models\u27 training have further accelerated the demand of computational power and lower precision arithmetic. In this era following the end of Dennard\u27s Scaling and when Moore\u27s Law seemingly still holds true to a lesser extent, it is not a coincidence that HPC systems are equipped with multi-cores CPUs and a variety of hardware accelerators that are all massively parallel. Coupling this with interconnect networks\u27 speed improvements lagging behind those of computational power increases, the current state of HPC systems is heterogeneous and extremely complex. This was heralded as a great challenge to the software stacks and their ability to extract performance from these systems, but also as a great opportunity to innovate at the programming model level to explore the different approaches and propose new solutions. With usability, portability, and performance as the main factors to consider, this dissertation first evaluates some of the widely used parallel programming models (MPI, MPI+OpenMP, and task-based runtime systems) ability to manage the load imbalance among the processes computing the LU factorization of a large dense matrix stored in the Block Low-Rank (BLR) format. Next I proposed a number of optimizations and implemented them in PaRSEC\u27s Dynamic Task Discovery (DTD) model, including user-level graph trimming and direct Application Programming Interface (API) calls to perform data broadcast operation to further extend the limit of STF model. On the other hand, the Parameterized Task Graph (PTG) approach in PaRSEC is the most scalable approach for many different applications, which I then explored the possibility of combining both the algorithmic approach of Communication-Avoiding (CA) and the communication-computation overlapping benefits provided by runtime systems using 2D five-point stencil as the test case. This broad programming models evaluation and extension work highlighted the abilities of task-based runtime system in achieving scalable performance and portability on contemporary heterogeneous HPC systems. Finally, I summarized the profiling capability of PaRSEC runtime system, and demonstrated with a use case its important role in the performance bottleneck identification leading to optimizations