29,999 research outputs found
Segue: Overviewing Evolution Patterns of Egocentric Networks by Interactive Construction of Spatial Layouts
Getting the overall picture of how a large number of ego-networks evolve is a
common yet challenging task. Existing techniques often require analysts to
inspect the evolution patterns of ego-networks one after another. In this
study, we explore an approach that allows analysts to interactively create
spatial layouts in which each dot is a dynamic ego-network. These spatial
layouts provide overviews of the evolution patterns of ego-networks, thereby
revealing different global patterns such as trends, clusters and outliers in
evolution patterns. To let analysts interactively construct interpretable
spatial layouts, we propose a data transformation pipeline, with which analysts
can adjust the spatial layouts and convert dynamic egonetworks into event
sequences to aid interpretations of the spatial positions. Based on this
transformation pipeline, we developed Segue, a visual analysis system that
supports thorough exploration of the evolution patterns of ego-networks.
Through two usage scenarios, we demonstrate how analysts can gain insights into
the overall evolution patterns of a large collection of ego-networks by
interactively creating different spatial layouts.Comment: Published at IEEE Conference on Visual Analytics Science and
Technology (IEEE VAST 2018
Persistent Homology Guided Force-Directed Graph Layouts
Graphs are commonly used to encode relationships among entities, yet their
abstractness makes them difficult to analyze. Node-link diagrams are popular
for drawing graphs, and force-directed layouts provide a flexible method for
node arrangements that use local relationships in an attempt to reveal the
global shape of the graph. However, clutter and overlap of unrelated structures
can lead to confusing graph visualizations. This paper leverages the persistent
homology features of an undirected graph as derived information for interactive
manipulation of force-directed layouts. We first discuss how to efficiently
extract 0-dimensional persistent homology features from both weighted and
unweighted undirected graphs. We then introduce the interactive persistence
barcode used to manipulate the force-directed graph layout. In particular, the
user adds and removes contracting and repulsing forces generated by the
persistent homology features, eventually selecting the set of persistent
homology features that most improve the layout. Finally, we demonstrate the
utility of our approach across a variety of synthetic and real datasets
VIOLA - A multi-purpose and web-based visualization tool for neuronal-network simulation output
Neuronal network models and corresponding computer simulations are invaluable
tools to aid the interpretation of the relationship between neuron properties,
connectivity and measured activity in cortical tissue. Spatiotemporal patterns
of activity propagating across the cortical surface as observed experimentally
can for example be described by neuronal network models with layered geometry
and distance-dependent connectivity. The interpretation of the resulting stream
of multi-modal and multi-dimensional simulation data calls for integrating
interactive visualization steps into existing simulation-analysis workflows.
Here, we present a set of interactive visualization concepts called views for
the visual analysis of activity data in topological network models, and a
corresponding reference implementation VIOLA (VIsualization Of Layer Activity).
The software is a lightweight, open-source, web-based and platform-independent
application combining and adapting modern interactive visualization paradigms,
such as coordinated multiple views, for massively parallel neurophysiological
data. For a use-case demonstration we consider spiking activity data of a
two-population, layered point-neuron network model subject to a spatially
confined excitation originating from an external population. With the multiple
coordinated views, an explorative and qualitative assessment of the
spatiotemporal features of neuronal activity can be performed upfront of a
detailed quantitative data analysis of specific aspects of the data.
Furthermore, ongoing efforts including the European Human Brain Project aim at
providing online user portals for integrated model development, simulation,
analysis and provenance tracking, wherein interactive visual analysis tools are
one component. Browser-compatible, web-technology based solutions are therefore
required. Within this scope, with VIOLA we provide a first prototype.Comment: 38 pages, 10 figures, 3 table
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