Differentiation between metastatic and tumour-free cervical lymph nodes in patients with papillary thyroid carcinoma by grey-scale sonographic texture analysis

Purpose: Papillary thyroid carcinoma (PTC) is the most common thyroid cancer, and cervical lymph nodes (LNs) are the most common extrathyroid metastatic involvement. Early detection and reliable diagnosis of LNs can lead to improved cure rates and management costs. This study explored the potential of texture analysis for texture-based classification of tumour-free and metastatic cervical LNs of PTC in ultrasound imaging. Material and methods: A total of 274 LNs (137 tumour-free and 137 metastatic) were explored using the texture analysis (TA) method. Up to 300 features were extracted for texture analysis in three normalisations (default, 3sigma, and 1-99%). Linear discriminant analysis was employed to transform raw data to lower-dimensional spaces and increase discriminative power. The features were classified by the first nearest neighbour classifier. Results: Normalisation reflected improvement on the performance of the classifier; hence, the features under 3sigma normalisation schemes through FFPA (fusion Fisher plus the probability of classification error [POE] + average correlation coefficients [ACC]) features indicated high performance in classifying tumour-free and metastatic LNs with a sensitivity of 99.27%, specificity of 98.54%, accuracy of 98.90%, positive predictive value of 98.55%, and negative predictive value of 99.26%. The area under the receiver operating characteristic curve was 0.996. Conclusions: TA was determined to be a reliable method with the potential for characterisation. This method can be applied by physicians to differentiate between tumour-free and metastatic LNs in patients with PTC in conventional ultrasound imaging

Differentiation between metastatic and tumour-free cervical lymph nodes in patients with papillary thyroid carcinoma by grey-scale sonographic texture analysis

Purpose: Papillary thyroid carcinoma (PTC) is the most common thyroid cancer, and cervical lymph nodes (LNs) are the most common extrathyroid metastatic involvement. Early detection and reliable diagnosis of LNs can lead to improved cure rates and management costs. This study explored the potential of texture analysis for texture-based classification of tumour-free and metastatic cervical LNs of PTC in ultrasound imaging. Material and methods: A total of 274 LNs (137 tumour-free and 137 metastatic) were explored using the texture analysis (TA) method. Up to 300 features were extracted for texture analysis in three normalisations (default, 3sigma, and 1-99). Linear discriminant analysis was employed to transform raw data to lower-dimensional spaces and increase discriminative power. The features were classified by the first nearest neighbour classifier. Results: Normalisation reflected improvement on the performance of the classifier; hence, the features under 3sigma normalisation schemes through FFPA (fusion Fisher plus the probability of classification error POE + average correlation coefficients ACC) features indicated high performance in classifying tumour-free and metastatic LNs with a sensitivity of 99.27%, specificity of 98.54%, accuracy of 98.90%, positive predictive value of 98.55%, and negative predictive value of 99.26%. The area under the receiver operating characteristic curve was 0.996. Conclusions: TA was determined to be a reliable method with the potential for characterisation. This method can be applied by physicians to differentiate between tumour-free and metastatic LNs in patients with PTC in conventional ultrasound imaging. © Pol J Radiol

Differentiation between metastatic and tumour-free cervical lymph nodes in patients with papillary thyroid carcinoma by grey-scale sonographic texture analysis

Purpose: Papillary thyroid carcinoma (PTC) is the most common thyroid cancer, and cervical lymph nodes (LNs) are the most common extrathyroid metastatic involvement. Early detection and reliable diagnosis of LNs can lead to improved cure rates and management costs. This study explored the potential of texture analysis for texture-based classification of tumour-free and metastatic cervical LNs of PTC in ultrasound imaging. Material and methods: A total of 274 LNs (137 tumour-free and 137 metastatic) were explored using the texture analysis (TA) method. Up to 300 features were extracted for texture analysis in three normalisations (default, 3sigma, and 1-99). Linear discriminant analysis was employed to transform raw data to lower-dimensional spaces and increase discriminative power. The features were classified by the first nearest neighbour classifier. Results: Normalisation reflected improvement on the performance of the classifier; hence, the features under 3sigma normalisation schemes through FFPA (fusion Fisher plus the probability of classification error POE + average correlation coefficients ACC) features indicated high performance in classifying tumour-free and metastatic LNs with a sensitivity of 99.27%, specificity of 98.54%, accuracy of 98.90%, positive predictive value of 98.55%, and negative predictive value of 99.26%. The area under the receiver operating characteristic curve was 0.996. Conclusions: TA was determined to be a reliable method with the potential for characterisation. This method can be applied by physicians to differentiate between tumour-free and metastatic LNs in patients with PTC in conventional ultrasound imaging. © Pol J Radiol

Técnicas basadas en kernel para el análisis de texturas en imagen biomédica

[Resumen] En problemas del mundo real es relevante el estudio de la importancia de todas las variables obtenidas de manera que sea posible la eliminación de ruido, es en este punto donde surgen las técnicas de selección de variables. El objetivo de estas técnicas es pues encontrar el subconjunto de variables que describan de la mejor manera posible la información útil contenida en los datos permitiendo mejorar el rendimiento. En espacios de alta dimensionalidad son especialmente interesantes las técnicas basadas en kernel, donde han demostrado una alta eficiencia debido a su capacidad para generalizar en dichos espacios. En este trabajo se realiza una nueva propuesta para el análisis de texturas en imagen biomédica mediante la integración, utilizando técnicas basadas en kernel, de diferentes tipos de datos de textura para la selección de las variables más representativas con el objetivo de mejorar los resultados obtenidos en clasificación y en interpretabilidad de las variables obtenidas. Para validar esta propuesta se ha formalizado un diseño experimental con cuatro fases diferenciadas: extracción y preprocesado de los datos, aprendizaje y selección del mejor modelo asegurando la reproducibilidad de los resultados a la vez que una comparación en condiciones de igualdad.[Resumo] En problemas do mundo real é relevante o estudo da importancia de todas as variables obtidas de maneira que sexa posible a eliminación de ruído, é neste punto onde xorden as técnicas de selección de variables. O obxectivo destas técnicas é pois encontrar o subconxunto de variables que describan do mellor xeito posible a información útil contida nos datos permitindo mellorar o rendemento. En espazos de alta dimensionalidade son especialmente interesantes as técnicas baseadas en kernel, onde demostraron unha alta eficiencia debido á súa capacidade para xeneralizar nos devanditos espazos. Neste traballo realízase unha nova proposta para a análise de texturas en imaxe biomédica mediante a integración, utilizando técnicas baseadas en kernel, de diferentes tipos de datos de textura para a selección das variables máis representativas co obxectivo de mellorar os resultados obtidos en clasificación e en interpretabilidade das variables obtidas. Para validar esta proposta formalizouse un deseño experimental con catro fases diferenciadas: extracción e preprocesar dos datos, aprendizaxe e selección do mellor modelo asegurando a reproducibilidade dos resultados á vez que unha comparación en condicións de igualdade. Utilizáronse imaxes de xeles de electroforese bidimensional.[Abstract] In real-world problems it is of relevance to study the importance of all the variables obtained, so that denoising could be possible, because it is at this point when the variable selection techniques arise. Therefore, these techniques are aimed at finding the subset of variables that describe' in the best possible way the useful information contained in the data, allowing improved performance. In high-dimensional spaces, the kernel-based techniques are of special relevance, as they have demonstrated a high efficiency due to their ability to generalize in these spaces. In this work, a new approach for texture analysis in biomedical imaging is performed by means of integration. For this procedure, kernel-based techniques were used with different types of texture data for the selection of the most representative variables in order to improve the results obtained in classification and interpretability of the obtained variables. To validate this proposal, an experimental design has been concluded, consisting of four different phases: 1) Data extraction; 2) Data pre-processing; 3) Learning and 4) Selection of the best model to ensure the reproducibility of results while making a comparison under conditions of equality. In this regard, two-dimensional electrophoresis gel images have been used