Axioms for graph clustering quality functions

We investigate properties that intuitively ought to be satisfied by graph clustering quality functions, that is, functions that assign a score to a clustering of a graph. Graph clustering, also known as network community detection, is often performed by optimizing such a function. Two axioms tailored for graph clustering quality functions are introduced, and the four axioms introduced in previous work on distance based clustering are reformulated and generalized for the graph setting. We show that modularity, a standard quality function for graph clustering, does not satisfy all of these six properties. This motivates the derivation of a new family of quality functions, adaptive scale modularity, which does satisfy the proposed axioms. Adaptive scale modularity has two parameters, which give greater flexibility in the kinds of clusterings that can be found. Standard graph clustering quality functions, such as normalized cut and unnormalized cut, are obtained as special cases of adaptive scale modularity. In general, the results of our investigation indicate that the considered axiomatic framework covers existing `good' quality functions for graph clustering, and can be used to derive an interesting new family of quality functions.Comment: 23 pages. Full text and sources available on: http://www.cs.ru.nl/~T.vanLaarhoven/graph-clustering-axioms-2014

Optimizing an Organized Modularity Measure for Topographic Graph Clustering: a Deterministic Annealing Approach

This paper proposes an organized generalization of Newman and Girvan's modularity measure for graph clustering. Optimized via a deterministic annealing scheme, this measure produces topologically ordered graph clusterings that lead to faithful and readable graph representations based on clustering induced graphs. Topographic graph clustering provides an alternative to more classical solutions in which a standard graph clustering method is applied to build a simpler graph that is then represented with a graph layout algorithm. A comparative study on four real world graphs ranging from 34 to 1 133 vertices shows the interest of the proposed approach with respect to classical solutions and to self-organizing maps for graphs

A PAC-Bayesian Analysis of Graph Clustering and Pairwise Clustering

We formulate weighted graph clustering as a prediction problem: given a subset of edge weights we analyze the ability of graph clustering to predict the remaining edge weights. This formulation enables practical and theoretical comparison of different approaches to graph clustering as well as comparison of graph clustering with other possible ways to model the graph. We adapt the PAC-Bayesian analysis of co-clustering (Seldin and Tishby, 2008; Seldin, 2009) to derive a PAC-Bayesian generalization bound for graph clustering. The bound shows that graph clustering should optimize a trade-off between empirical data fit and the mutual information that clusters preserve on the graph nodes. A similar trade-off derived from information-theoretic considerations was already shown to produce state-of-the-art results in practice (Slonim et al., 2005; Yom-Tov and Slonim, 2009). This paper supports the empirical evidence by providing a better theoretical foundation, suggesting formal generalization guarantees, and offering a more accurate way to deal with finite sample issues. We derive a bound minimization algorithm and show that it provides good results in real-life problems and that the derived PAC-Bayesian bound is reasonably tight