Chaotic Dynamics Enhance the Sensitivity of Inner Ear Hair Cells

Hair cells of the auditory and vestibular systems are capable of detecting sounds that induce sub-nanometer vibrations of the hair bundle, below the stochastic noise levels of the surrounding fluid. Hair bundles of certain species are also known to oscillate without external stimulation, indicating the presence of an underlying active mechanism. We propose that chaotic dynamics enhance the sensitivity and temporal resolution of the hair bundle response, and provide experimental and theoretical evidence for this effect. By varying the viscosity and ionic composition of the surrounding fluid, we are able to modulate the degree of chaos observed in the hair bundle dynamics in vitro. We consistently find that the hair bundle is most sensitive to a stimulus of small amplitude when it is poised in the weakly chaotic regime. Further, we show that the response time to a force step decreases with increasing levels of chaos. These results agree well with our numerical simulations of a chaotic Hopf oscillator and suggest that chaos may be responsible for the sensitivity and temporal resolution of hair cells

Phase resetting reveals network dynamics underlying a bacterial cell cycle

Genomic and proteomic methods yield networks of biological regulatory interactions but do not provide direct insight into how those interactions are organized into functional modules, or how information flows from one module to another. In this work we introduce an approach that provides this complementary information and apply it to the bacterium Caulobacter crescentus, a paradigm for cell-cycle control. Operationally, we use an inducible promoter to express the essential transcriptional regulatory gene ctrA in a periodic, pulsed fashion. This chemical perturbation causes the population of cells to divide synchronously, and we use the resulting advance or delay of the division times of single cells to construct a phase resetting curve. We find that delay is strongly favored over advance. This finding is surprising since it does not follow from the temporal expression profile of CtrA and, in turn, simulations of existing network models. We propose a phenomenological model that suggests that the cell-cycle network comprises two distinct functional modules that oscillate autonomously and couple in a highly asymmetric fashion. These features collectively provide a new mechanism for tight temporal control of the cell cycle in C. crescentus. We discuss how the procedure can serve as the basis for a general approach for probing network dynamics, which we term chemical perturbation spectroscopy (CPS)

The Mid-Pleistocene Transition induced by delayed feedback and bistability

The Mid-Pleistocene Transition, the shift from 41 kyr to 100 kyr glacial-interglacial cycles that occurred roughly 1 Myr ago, is often considered as a change in internal climate dynamics. Here we revisit the model of Quaternary climate dynamics that was proposed by Saltzman and Maasch (1988). We show that it is quantitatively similar to a scalar equation for the ice dynamics only when combining the remaining components into a single delayed feedback term. The delay is the sum of the internal times scales of ocean transport and ice sheet dynamics, which is on the order of 10 kyr. We find that, in the absence of astronomical forcing, the delayed feedback leads to bistable behaviour, where stable large-amplitude oscillations of ice volume and an equilibrium coexist over a large range of values for the delay. We then apply astronomical forcing. We perform a systematic study to show how the system response depends on the forcing amplitude. We find that over a wide range of forcing amplitudes the forcing leads to a switch from small-scale oscillations of 41 kyr to large-amplitude oscillations of roughly 100 kyr without any change of other parameters. The transition in the forced model consistently occurs near the time of the Mid-Pleistocene Transition as observed in data records. This provides evidence that the MPT could have been primarily a forcing-induced switch between attractors of the internal dynamics. Small additional random disturbances make the forcing-induced transition near 800 kyr BP even more robust. We also find that the forced system forgets its initial history during the small-scale oscillations, in particular, nearby initial conditions converge prior to transitioning. In contrast to this, in the regime of large-amplitude oscillations, the oscillation phase is very sensitive to random perturbations, which has a strong effect on the timing of the deglaciation events

Closed-loop Characterization of Noise and Stability in a Mode-localized Resonant MEMS Sensor.

This paper presents results from the closed-loop characterization of an electrically coupled mode-localized sensor topology including measurements of amplitude ratios over long duration, stability, noise floor and the bandwidth of operation. The sensitivity of the prototype sensor is estimated to be -5250 in the linear operation regime. An input-referred stability of 84ppb with respect to normalized stiffness perturbations is achieved at 500s. When compared to frequency shift sensing within the same device, amplitude ratio sensing provides higher resolution for long term measurements due to the intrinsic common mode rejection properties of a mode-localized system. A theoretical framework is established to quantify noise floor associated with measurements validated through numerical simulations and experimental data. In addition, the operating bandwidth of the sensor is found to be 3.5Hz for 3dB flatness

Heteroclinic Ratchets in a System of Four Coupled Oscillators

We study an unusual but robust phenomenon that appears in an example system of four coupled phase oscillators. We show that the system can have a robust attractor that responds to a specific detuning between certain pairs of the oscillators by a breaking of phase locking for arbitrary positive detunings but not for negative detunings. As the dynamical mechanism behind this is a particular type of heteroclinic network, we call this a 'heteroclinic ratchet' because of its dynamical resemblance to a mechanical ratchet

Analysis of Vocal Disorders in a Feature Space

This paper provides a way to classify vocal disorders for clinical applications. This goal is achieved by means of geometric signal separation in a feature space. Typical quantities from chaos theory (like entropy, correlation dimension and first lyapunov exponent) and some conventional ones (like autocorrelation and spectral factor) are analysed and evaluated, in order to provide entries for the feature vectors. A way of quantifying the amount of disorder is proposed by means of an healthy index that measures the distance of a voice sample from the centre of mass of both healthy and sick clusters in the feature space. A successful application of the geometrical signal separation is reported, concerning distinction between normal and disordered phonation.Comment: 12 pages, 3 figures, accepted for publication in Medical Engineering & Physic