A GRASPxELS with Depth First Search Split Procedure for the HVRP

Split procedures have been proved to be efficient within global framework optimization for routing problems by splitting giant tour into trips. This is done by generating optimal shortest path within an auxiliary graph built from the giant tour. An efficient application has been introduced for the first time by Lacomme et al. (2001) within a metaheuristic approach to solve the Capacitated Arc Routing Problem (CARP) and second for the Vehicle Routing Problem (VRP) by Prins (2004). In a further step, the Split procedure embedded in metaheuristics has been extended to address more complex routing problems thanks to a heuristic splitting of the giant tour using the generation of labels on the nodes of the auxiliary graph linked to resource management. Lately, Duhamel et al. (2010) defined a new Split family based on a depth first search approach during labels generation in graph. The efficiency of the new split method has been first evaluated in location routing problem with a GRASP metaheuristic. Duhamel et al. (2010) provided full numerical experiments on this topic

A GRASPxELS with Depth First Search Split Procedure for the HVRP

Split procedures have been proved to be efficient within global framework optimization for routing problems by splitting giant tour into trips. This is done by generating optimal shortest path within an auxiliary graph built from the giant tour. An efficient application has been introduced for the first time by Lacomme et al. (2001) within a metaheuristic approach to solve the Capacitated Arc Routing Problem (CARP) and second for the Vehicle Routing Problem (VRP) by Prins (2004). In a further step, the Split procedure embedded in metaheuristics has been extended to address more complex routing problems thanks to a heuristic splitting of the giant tour using the generation of labels on the nodes of the auxiliary graph linked to resource management. Lately, Duhamel et al. (2010) defined a new Split family based on a depth first search approach during labels generation in graph. The efficiency of the new split method has been first evaluated in location routing problem with a GRASP metaheuristic. Duhamel et al. (2010) provided full numerical experiments on this topic

Energy management in communication networks: a journey through modelling and optimization glasses

The widespread proliferation of Internet and wireless applications has produced a significant increase of ICT energy footprint. As a response, in the last five years, significant efforts have been undertaken to include energy-awareness into network management. Several green networking frameworks have been proposed by carefully managing the network routing and the power state of network devices. Even though approaches proposed differ based on network technologies and sleep modes of nodes and interfaces, they all aim at tailoring the active network resources to the varying traffic needs in order to minimize energy consumption. From a modeling point of view, this has several commonalities with classical network design and routing problems, even if with different objectives and in a dynamic context. With most researchers focused on addressing the complex and crucial technological aspects of green networking schemes, there has been so far little attention on understanding the modeling similarities and differences of proposed solutions. This paper fills the gap surveying the literature with optimization modeling glasses, following a tutorial approach that guides through the different components of the models with a unified symbolism. A detailed classification of the previous work based on the modeling issues included is also proposed

Industrial and Tramp Ship Routing Problems: Closing the Gap for Real-Scale Instances

Recent studies in maritime logistics have introduced a general ship routing problem and a benchmark suite based on real shipping segments, considering pickups and deliveries, cargo selection, ship-dependent starting locations, travel times and costs, time windows, and incompatibility constraints, among other features. Together, these characteristics pose considerable challenges for exact and heuristic methods, and some cases with as few as 18 cargoes remain unsolved. To face this challenge, we propose an exact branch-and-price (B&P) algorithm and a hybrid metaheuristic. Our exact method generates elementary routes, but exploits decremental state-space relaxation to speed up column generation, heuristic strong branching, as well as advanced preprocessing and route enumeration techniques. Our metaheuristic is a sophisticated extension of the unified hybrid genetic search. It exploits a set-partitioning phase and uses problem-tailored variation operators to efficiently handle all the problem characteristics. As shown in our experimental analyses, the B&P optimally solves 239/240 existing instances within one hour. Scalability experiments on even larger problems demonstrate that it can optimally solve problems with around 60 ships and 200 cargoes (i.e., 400 pickup and delivery services) and find optimality gaps below 1.04% on the largest cases with up to 260 cargoes. The hybrid metaheuristic outperforms all previous heuristics and produces near-optimal solutions within minutes. These results are noteworthy, since these instances are comparable in size with the largest problems routinely solved by shipping companies

Algoritmos e formulações matemáticas para problemas de roteamento em arcos

Orientador: Fábio Luiz UsbertiTese (doutorado) - Universidade Estadual de Campinas, Instituto de ComputaçãoResumo: Problemas de roteamento em arcos têm por objetivo determinar rotas de custo mínimo que visitam um subconjunto de arcos de um grafo, com uma ou mais restrições adicionais. Esta tese estuda três problemas NP-difíceis de roteamento em arcos: (1) o problema de roteamento em arcos capacitado (CARP); (2) o problema de roteamento em arcos capacitado e aberto (OCARP); e (3) o problema do carteiro chinês com cobertura (CCPP). Apresentamos formulações matemáticas e métodos exatos e heurísticos para tratar computacionalmente esses problemas: (i) uma heurística construtiva gulosa e randomizada é proposta para o CARP; (ii) uma metaheurística de algoritmos genéticos híbrido e dois métodos de limitantes inferiores por programação linear inteira, um branch-and-cut e um baseado em redes de fluxos, são propostos para o OCARP; e (iii) um método exato branch-and-cut com desigualdades válidas e uma heurística construtiva são propostos para o CCPP. Extensivos experimentos computacionais utilizando instâncias de benchmark foram executados para demonstrar o desempenho dos métodos propostos em relação aos métodos da literatura, considerando tanto a qualidade das soluções obtidas quanto o tempo de processamento. Nossos resultados mostram que os métodos propostos são estado da arte. Os problemas estudados apresentam aplicações práticas relevantes: o CARP tem aplicações em coleta de lixo urbano e remoção de neve de estradas; o OCARP tem aplicações em roteamento de leituristas e na definição de caminhos de corte em chapas metálicas; e o CCPP tem aplicações em roteamento de leituristas com o uso de tecnologia wireless. A solução desses problemas remete à diminuição de custos logísticos, melhorando a competitividade das empresasAbstract: Arc routing problems aim to find minimum cost routes that visit a subset of arcs of a graph, with one or more side constraints. This thesis studies three NP-hard arc routing problems: (1) the capacitated arc routing problem (CARP); (2) the open capacitated arc routing problem (OCARP); and (3) the covering Chinese postman problem (CCPP). We present mathematical formulations and heuristic and exact methods to computationally solve these problems: (i) a greedy and randomized constructive heuristic is proposed for the CARP; (ii) a hybrid genetic algorithm metaheuristic and two linear integer programming lower bound methods, one based on branch-and-cut and one based on flow networks, are proposed for the OCARP; and (iii) an exact branch-and-cut method with valid inequalities and a constructive heuristic are proposed for the CCPP. Extensive computational experiments using benchmark instances were performed to demonstrate the performance of the proposed methods in comparison to the previous methods, regarding both quality of solutions and processing time. Our results show that the proposed methods are state-of-the-art. The studied problems have many relevant practical applications: the CARP has applications on urban waste collection and snow removal; the OCARP has applications on the routing of meter readers and the cutting of metal sheets; and last, the CCPP has applications on automated meter readers routing. The solution of these problems leads to the reduction of logistics costs, improving businesses competitivenessDoutoradoCiência da ComputaçãoDoutor em Ciência da Computação2016/00315-0FAPES

Inference of single-cell phylogenies from lineage tracing data using Cassiopeia.

The pairing of CRISPR/Cas9-based gene editing with massively parallel single-cell readouts now enables large-scale lineage tracing. However, the rapid growth in complexity of data from these assays has outpaced our ability to accurately infer phylogenetic relationships. First, we introduce Cassiopeia-a suite of scalable maximum parsimony approaches for tree reconstruction. Second, we provide a simulation framework for evaluating algorithms and exploring lineage tracer design principles. Finally, we generate the most complex experimental lineage tracing dataset to date, 34,557 human cells continuously traced over 15 generations, and use it for benchmarking phylogenetic inference approaches. We show that Cassiopeia outperforms traditional methods by several metrics and under a wide variety of parameter regimes, and provide insight into the principles for the design of improved Cas9-enabled recorders. Together, these should broadly enable large-scale mammalian lineage tracing efforts. Cassiopeia and its benchmarking resources are publicly available at www.github.com/YosefLab/Cassiopeia

Декомпозиция задачи маршрутизации по эвристикам метода Кларка-Райта

For the English abstract and full text of the article please see the attached PDF-File (English version follows Russian version).ABSTRACT The article is devoted to decomposition of the task of transport routing based on heuristic estimates with the Clarke-Wright method. A procedure is proposed for designing an automobile transport system based on the criterion of minimizing the total mileage by various formalized decomposition methods, in particular, using the «benefit functions» algorithm and formation of zones (clusters, subsets) of vehicle maintenance. The advantages of the proposed method are clearly shown in comparison with the method of «the shortest distance matrix», at the example of delivery of ten cargo units from a supplier to ten consumers. The effect of reducing the total mileage on the designed routes was 9,45 %. Keywords: transport routing, Clarke-Wright method, «benefit function», cluster, decomposition method, heuristic estimation, the shortest distances matrixТекст аннотации на англ. языке и полный текст статьи на англ. языке находится в прилагаемом файле ПДФ (англ. версия следует после русской версии).Статья посвящена декомпозиции задачи маршрутизации транспорта по эвристическим оценкам метода Кларка-Райта. Предложена процедура проектирования развозочной автотранспортной системы по критерию минимизации суммарного общего пробега различными формализованными методами декомпозиции, в частности, с помощью алгоритма «функций выгоды» и формирования зон (кластеров, подмножеств, «кустов») обслуживания транспортного средства. Наглядно показаны преимущества предлагаемого метода по сравнению с методом «по матрице кратчайших расстояний» на примере доставки десяти единиц груза от поставщика десяти потребителям по одной грузовой единице. Эффект от сокращения суммарного пробега на построенных маршрутах составил 9,45 %