Researching Framework for Simulating/Implementating P Systems

Researching simulation/implementation of membranes systems is very recent. Present literature gathers new publications frequently about software/hardware, data structures and algorithms for implementing P system evolution. In this context, this work presents a framework which goal is to make tasks of researchers of this field easier. Hence, it establishes the set of cooperating classes that form a reusable and flexible design for the customizable evaluation with new data structures and algorithms. Moreover, it includes customizable services for correcting, monitoring and logging the evolution and edition, recovering, automatic generating, persistence and visualizing P systems

Implementing Transition P Systems

Ponencia en el Congreso NIT 201

Development of system supervision and control software for a micromanipulation system

This paper presents the realization of a modular software architecture that is capable of handling the complex supervision structure of a multi degree of freedom open architecture and reconfigurable micro assembly workstation. This software architecture initially developed for a micro assembly workstation is later structured to form a framework and design guidelines for precise motion control and system supervision tasks explained subsequently through an application on a micro assembly workstation. The software is separated by design into two different layers, one for real-time and the other for non-realtime. These two layers are composed of functional modules that form the building blocks for the precise motion control and the system supervision of complex mechatronics systems

ARM-Cortex M3-Based Two-Wheel Robot for Assessing Grid Cell Model of Medial Entorhinal Cortex: Progress towards Building Robots with Biologically Inspired Navigation-Cognitive Maps

This article presents the implementation and use of a two-wheel autonomous robot and its effectiveness as a tool for studying the recently discovered use of grid cells as part of mammalian’s brains space-mapping circuitry (specifically the medial entorhinal cortex). A proposed discrete-time algorithm that emulates the medial entorhinal cortex is programed into the robot. The robot freely explores a limited laboratory area in the manner of a rat or mouse and reports information to a PC, thus enabling research without the use of live individuals. Position coordinate neural maps are achieved as mathematically predicted although for a reduced number of implemented neurons (i.e., 200 neurons). However, this type of computational embedded system (robot’s microcontroller) is found to be insufficient for simulating huge numbers of neurons in real time (as in the medial entorhinal cortex). It is considered that the results of this work provide an insight into achieving an enhanced embedded systems design for emulating and understanding mathematical neural network models to be used as biologically inspired navigation system for robots

Circuit FPGA for active rules selection in a transition P system region

P systems or Membrane Computing are a type of a distributed, massively parallel and non deterministic system based on biological membranes. These systems perform a computation through transition between two consecutive configurations. As it is well known in membrane computing, a configuration consists in a m-tuple of multisets present at any moment in the existing m regions of the system at that moment time. Transitions between two configurations are performed by using evolution rules which are in each region of the system in a non-deterministic maximally parallel manner. This article shows the development of a hardware circuit of selection of active rules in a membrane of a transition P-system. This development has been researched by using the Quartus II tool of Altera Semiconductors. In the first place, the initial specifications are defined in orfer to outline the synthesis of the circuit of active rules selection. Later on the design and synthesis of the circuit will be shown, as well as, the operation tests required to present the obtained results

Evaluation of Wireless Sensor Networks Technologies

Wireless sensor networks represent a new technology that has emerged from developments in ultra low power microcontrollers and sophisticated low cost wireless data devices. Their small size and power consumption allow a number of independent ‘nodes’ (known as Motes) to be distributed in the field, all capable of ad-hoc networking and multihop message transmission. New routing algorithms allow remote data to be passed reliably through the network to a final control point. This occurs within the constraints of low power RF transmissions in a congested 2.4GHz radio spectrum. Wireless sensor network nodes are suitable for applications requiring long term autonomous operation, away from mains power supplies, such as environmental or health monitoring. To achieve this, sophisticated power management techniques must be used, with the units remaining ‘asleep’ in ultra low power mode for long periods of time. The main aim of this research described in this thesis is first to review the area and then to evaluate one of the current hardware platforms and the popular software used with it called TinyOS. Therefore this research uses a hardware platform designed from University of Berkeley, called the TmoteSky. Practical work has been carried out in different scenarios. Using Java tools running on a PC, and customized applications running on the Motes, data has been captured, together with information showing topology configuration and adaptive routing of the network and radio link quality information. Results show that the technology is promising for distributed data acquisition applications, although in time critical monitoring systems new power management schemes and networking protocols to improve latency in the system will be required

The Design and Implementation of an Extensible Brain-Computer Interface

An implantable brain computer interface: BCI) includes tissue interface hardware, signal conditioning circuitry, analog-to-digital conversion: ADC) circuitry and some sort of computing hardware to discriminate desired waveforms from noise. Within an experimental paradigm the tissue interface and ADC hardware will rarely change. Recent literature suggests it is often the specific implementation of waveform discrimination that can limit the usefulness and lifespan of a particular BCI design. If the discrimination techniques are implemented in on-board software, experimenters gain a level of flexibility not currently available in published designs. To this end, I have developed a firmware library to acquire data sampled from an ADC, discriminate the signal for desired waveforms employing a user-defined function, and perform arbitrary tasks. I then used this design to develop an embedded BCI built upon the popular Texas Instruments MSP430 microcontroller platform. This system can operate on multiple channels simultaneously and is not fundamentally limited in the number of channels that can be processed. The resulting system represents a viable platform that can ease the design, development and use of BCI devices for a variety of applications

MAREX: A general purpose hardware architecture for membrane computing

Membrane computing is an unconventional computing paradigm that has gained much attention in recent decades because of its massively parallel character and its usefulness to build models of complex systems. However, until now, there was no generic hardware implementation of P systems. Computational frameworks to execute P systems up to this day rely on the simulation of the parallel working mechanisms of P systems by inherently sequential algorithms. Such algorithms can then be implemented as is or can be parallelized, up to a certain point, to run on parallel computers. However, this is not as efficient as a dedicated parallel hardware implementation. There have been ad hoc implementations of particular P systems for parallel hardware, but they lack to be problem-generic or they are not scalable enough to implement large P systems. In this paper, a first intrinsically parallel hardware architecture to implement generic P system models is introduced. It is designed to be straightforwardly implemented in programmable logic circuits like FPGAs. The feasibility and correct execution of our architecture has been verified by means of a simulator, and several simulation results for different P system examples have been analysed to foresee the pros and cons of this design.Ministerio de Ciencia e Innovacion of Spain and the AEI/FEDER (EU) project TIN2017-89842-P (MABICAP)Ministerio de Ciencia e Innovacion of Spain and the AEI/FEDER (EU) project PID2019-110455GB-I00 (Par-HoT

Hybrid fuel cell-supercapacitor system: modeling and energy management using Proteus

The increasing adoption of electric vehicles (EVs) presents a promising solution for achieving sustainable transportation and reducing carbon emissions. To keep pace with technological advancements in the vehicular industry, this paper proposes the development of a hybrid energy storage system (HESS) and an energy management strategy (EMS) for EVs, implemented using Proteus Spice Ver 8. The HESS consists of a proton exchange membrane fuel cell (PEMFC) as the primary source and a supercapacitor (SC) as the secondary source. The EMS, integrated into an electronic board based on the STM32, utilizes a low-pass filter algorithm to distribute energy between the sources. The accuracy of the proposed PEMFC and SC models is validated by comparing Proteus simulation results with experimental tests conducted on the Bahia didactic bench and Maxwell SC bench, respectively. To optimize energy efficiency, simulations of the HESS system involve adjusting the hybridization rate through changes in the cutoff frequency. The analysis compares the state-of-charge (SOC) of the SC and the voltage efficiency of the fuel cell (FC), across different frequencies to optimize overall system performance. The results highlight that the chosen strategy satisfies the energy demand while preserving the FC’s dynamic performance and optimizing its utilization to the maximum

Interfacing of neuromorphic vision, auditory and olfactory sensors with digital neuromorphic circuits

The conventional Von Neumann architecture imposes strict constraints on the development of intelligent adaptive systems. The requirements of substantial computing power to process and analyse complex data make such an approach impractical to be used in implementing smart systems. Neuromorphic engineering has produced promising results in applications such as electronic sensing, networking architectures and complex data processing. This interdisciplinary field takes inspiration from neurobiological architecture and emulates these characteristics using analogue Very Large Scale Integration (VLSI). The unconventional approach of exploiting the non-linear current characteristics of transistors has aided in the development of low-power adaptive systems that can be implemented in intelligent systems. The neuromorphic approach is widely applied in electronic sensing, particularly in vision, auditory, tactile and olfactory sensors. While conventional sensors generate a huge amount of redundant output data, neuromorphic sensors implement the biological concept of spike-based output to generate sparse output data that corresponds to a certain sensing event. The operation principle applied in these sensors supports reduced power consumption with operating efficiency comparable to conventional sensors. Although neuromorphic sensors such as Dynamic Vision Sensor (DVS), Dynamic and Active pixel Vision Sensor (DAVIS) and AEREAR2 are steadily expanding their scope of application in real-world systems, the lack of spike-based data processing algorithms and complex interfacing methods restricts its applications in low-cost standalone autonomous systems. This research addresses the issue of interfacing between neuromorphic sensors and digital neuromorphic circuits. Current interfacing methods of these sensors are dependent on computers for output data processing. This approach restricts the portability of these sensors, limits their application in a standalone system and increases the overall cost of such systems. The proposed methodology simplifies the interfacing of these sensors with digital neuromorphic processors by utilizing AER communication protocols and neuromorphic hardware developed under the Convolution AER Vision Architecture for Real-time (CAVIAR) project. The proposed interface is simulated using a JAVA model that emulates a typical spikebased output of a neuromorphic sensor, in this case an olfactory sensor, and functions that process this data based on supervised learning. The successful implementation of this simulation suggests that the methodology is a practical solution and can be implemented in hardware. The JAVA simulation is compared to a similar model developed in Nengo, a standard large-scale neural simulation tool. The successful completion of this research contributes towards expanding the scope of application of neuromorphic sensors in standalone intelligent systems. The easy interfacing method proposed in this thesis promotes the portability of these sensors by eliminating the dependency on computers for output data processing. The inclusion of neuromorphic Field Programmable Gate Array (FPGA) board allows reconfiguration and deployment of learning algorithms to implement adaptable systems. These low-power systems can be widely applied in biosecurity and environmental monitoring. With this thesis, we suggest directions for future research in neuromorphic standalone systems based on neuromorphic olfaction