Protocols for Integrity Constraint Checking in Federated Databases

A federated database is comprised of multiple interconnected database systems that primarily operate independently but cooperate to a certain extent. Global integrity constraints can be very useful in federated databases, but the lack of global queries, global transaction mechanisms, and global concurrency control renders traditional constraint management techniques inapplicable. This paper presents a threefold contribution to integrity constraint checking in federated databases: (1) The problem of constraint checking in a federated database environment is clearly formulated. (2) A family of protocols for constraint checking is presented. (3) The differences across protocols in the family are analyzed with respect to system requirements, properties guaranteed by the protocols, and processing and communication costs. Thus, our work yields a suite of options from which a protocol can be chosen to suit the system capabilities and integrity requirements of a particular federated database environment

Using Actors to Build a Parallel DBMS

In this paper, we present the design and the architecture of a parallel main memory database management system. We focus on concurrency control scheme and recovery. Our prototype is based on the concept of “database actors”, an object-oriented data model well suited for parallelmanipulations. The storage sub system is built upon distributed Ram-files using SDDS (Scalable Distributed Data Structures) techniques. A nested transaction model is proposed and used to handle concurrency access and recovery. We have also proposed novel approach, based on wait-die, to implement a distributed deadlock prevention technique for our model of nested transactions

Version control of pathway models using XML patches

<p>Background: Computational modelling has become an important tool in understanding biological systems such as signalling pathways. With an increase in size complexity of models comes a need for techniques to manage model versions and their relationship to one another. Model version control for pathway models shares some of the features of software version control but has a number of differences that warrant a specific solution.</p> <p>Results: We present a model version control method, along with a prototype implementation, based on XML patches. We show its application to the EGF/RAS/RAF pathway.</p> <p>Conclusion: Our method allows quick and convenient storage of a wide range of model variations and enables a thorough explanation of these variations. Trying to produce these results without such methods results in slow and cumbersome development that is prone to frustration and human error.</p&gt

Interim Service ISDN Satellite (ISIS) network model for advanced satellite designs and experiments

The Interim Service Integrated Services Digital Network (ISDN) Satellite (ISIS) Network Model for Advanced Satellite Designs and Experiments describes a model suitable for discrete event simulations. A top-down model design uses the Advanced Communications Technology Satellite (ACTS) as its basis. The ISDN modeling abstractions are added to permit the determination and performance for the NASA Satellite Communications Research (SCAR) Program

A Survey on IT-Techniques for a Dynamic Emergency Management in Large Infrastructures

This deliverable is a survey on the IT techniques that are relevant to the three use cases of the project EMILI. It describes the state-of-the-art in four complementary IT areas: Data cleansing, supervisory control and data acquisition, wireless sensor networks and complex event processing. Even though the deliverable’s authors have tried to avoid a too technical language and have tried to explain every concept referred to, the deliverable might seem rather technical to readers so far little familiar with the techniques it describes

The how and why of lncRNA function: An innate immune perspective.

Next-generation sequencing has provided a more complete picture of the composition of the human transcriptome indicating that much of the "blueprint" is a vastness of poorly understood non-protein-coding transcripts. This includes a newly identified class of genes called long noncoding RNAs (lncRNAs). The lack of sequence conservation for lncRNAs across species meant that their biological importance was initially met with some skepticism. LncRNAs mediate their functions through interactions with proteins, RNA, DNA, or a combination of these. Their functions can often be dictated by their localization, sequence, and/or secondary structure. Here we provide a review of the approaches typically adopted to study the complexity of these genes with an emphasis on recent discoveries within the innate immune field. Finally, we discuss the challenges, as well as the emergence of new technologies that will continue to move this field forward and provide greater insight into the biological importance of this class of genes. This article is part of a Special Issue entitled: ncRNA in control of gene expression edited by Kotb Abdelmohsen

Full Service ISDN Satellite (FSIS) network model for advanced ISDN satellite design and experiments

The Full Service Integrated Services Digital Network (FSIS) network model for advanced satellite designs describes a model suitable for discrete event simulations. A top down model design uses the Advanced Communications Technology Satellite (ACTS) as its basis. The ACTS and the Interim Service ISDN Satellite (ISIS) perform ISDN protocol analyses and switching decisions in the terrestrial domain, whereas FSIS makes all its analyses and decisions on-board the ISDN satellite

Integrity Control in Relational Database Systems - An Overview

This paper gives an overview of research regarding integrity control or integrity constraint handling in relational database management systems. The topic of constraint handling is discussed from two points of view. First, constraint handling is discussed by identifying a number of important research issues, and by treating each issue in detail. Second, a number of projects is described that have resulted in the realization of database management systems supporting integrity constraints; the various projects are compared with respect to a number of system characteristics. Together, both approaches give a broad overview of the state of the art in the field at this moment