Density as the Segregation Mechanism in Fish School Search for Multimodal Optimization Problems

Abstract. Methods to deal with Multimodal Optimization Problems (MMOP) can be classified in three main approaches, regarding the number and the type of desired solutions. In general, methods can be applied to find: (1) only one global solution; (2) all global solutions; and (3) all local solutions of a given MMOP. The simultaneous capture of several solutions of MMOPs without parameter adjustment is still an open question in optimization problems. In this article, we discuss a density segregation mechanism for Fish School Search to enable simultaneous capture of multiple optimal solutions of MMOPs with one single parameter. The new proposal is based on vanilla version of Fish School Search (FSS) algorithm, which is inspired on actual fish school behavior. The performance of the new algorithm is evaluated and compared to the performance of other methods such as NichePSO and Glowworm Swarm Optimization (GSO) for seven well-known benchmark functions of two dimensions. According to the obtained results, presented in this article, the new approach outperforms the algorithms NichePSO and GSO for all benchmark functions

Swarm Robotics

Collectively working robot teams can solve a problem more efficiently than a single robot, while also providing robustness and flexibility to the group. Swarm robotics model is a key component of a cooperative algorithm that controls the behaviors and interactions of all individuals. The robots in the swarm should have some basic functions, such as sensing, communicating, and monitoring, and satisfy the following properties

Predictive decoding of neural data

In the last five decades the number of techniques available for non-invasive functional imaging has increased dramatically. Researchers today can choose from a variety of imaging modalities that include EEG, MEG, PET, SPECT, MRI, and fMRI. This doctoral dissertation offers a methodology for the reliable analysis of neural data at different levels of investigation. By using statistical learning algorithms the proposed approach allows single-trial analysis of various neural data by decoding them into variables of interest. Unbiased testing of the decoder on new samples of the data provides a generalization assessment of decoding performance reliability. Through consecutive analysis of the constructed decoder\u27s sensitivity it is possible to identify neural signal components relevant to the task of interest. The proposed methodology accounts for covariance and causality structures present in the signal. This feature makes it more powerful than conventional univariate methods which currently dominate the neuroscience field. Chapter 2 describes the generic approach toward the analysis of neural data using statistical learning algorithms. Chapter 3 presents an analysis of results from four neural data modalities: extracellular recordings, EEG, MEG, and fMRI. These examples demonstrate the ability of the approach to reveal neural data components which cannot be uncovered with conventional methods. A further extension of the methodology, Chapter 4 is used to analyze data from multiple neural data modalities: EEG and fMRI. The reliable mapping of data from one modality into the other provides a better understanding of the underlying neural processes. By allowing the spatial-temporal exploration of neural signals under loose modeling assumptions, it removes potential bias in the analysis of neural data due to otherwise possible forward model misspecification. The proposed methodology has been formalized into a free and open source Python framework for statistical learning based data analysis. This framework, PyMVPA, is described in Chapter 5

Correlated Multimodal Imaging in Life Sciences:Expanding the Biomedical Horizon

International audienceThe frontiers of bioimaging are currently being pushed toward the integration and correlation of several modalities to tackle biomedical research questions holistically and across multiple scales. Correlated Multimodal Imaging (CMI) gathers information about exactly the same specimen with two or more complementary modalities that-in combination-create a composite and complementary view of the sample (including insights into structure, function, dynamics and molecular composition). CMI allows to describe biomedical processes within their overall spatio-temporal context and gain a mechanistic understanding of cells, tissues, diseases or organisms by untangling their molecular mechanisms within their native environment. The two best-established CMI implementations for small animals and model organisms are hardware-fused platforms in preclinical imaging (Hybrid Imaging) and Correlated Light and Electron Microscopy (CLEM) in biological imaging. Although the merits of Preclinical Hybrid Imaging (PHI) and CLEM are well-established, both approaches would benefit from standardization of protocols, ontologies and data handling, and the development of optimized and advanced implementations. Specifically, CMI pipelines that aim at bridging preclinical and biological imaging beyond CLEM and PHI are rare but bear great potential to substantially advance both bioimaging and biomedical research. CMI faces three mai

Collective Information Processing and Criticality, Evolution and Limited Attention.

Im ersten Teil analysiere ich die Selbstorganisation zur Kritikalität (hier ein Phasenübergang von Ordnung zu Unordnung) und untersuche, ob Evolution ein möglicher Organisationsmechanismus ist. Die Kernfrage ist, ob sich ein simulierter kohäsiver Schwarm, der versucht, einem Raubtier auszuweichen, durch Evolution selbst zum kritischen Punkt entwickelt, um das Ausweichen zu optimieren? Es stellt sich heraus, dass (i) die Gruppe den Jäger am besten am kritischen Punkt vermeidet, aber (ii) nicht durch einer verstärkten Reaktion, sondern durch strukturelle Veränderungen, (iii) das Gruppenoptimum ist evolutionär unstabiler aufgrund einer maximalen räumlichen Selbstsortierung der Individuen. Im zweiten Teil modelliere ich experimentell beobachtete Unterschiede im kollektiven Verhalten von Fischgruppen, die über mehrere Generationen verschiedenen Arten von größenabhängiger Selektion ausgesetzt waren. Diese Größenselektion soll Freizeitfischerei (kleine Fische werden freigelassen, große werden konsumiert) und die kommerzielle Fischerei mit großen Netzbreiten (kleine/junge Individuen können entkommen) nachahmen. Die zeigt sich, dass das Fangen großer Fische den Zusammenhalt und die Risikobereitschaft der Individuen reduziert. Beide Befunde lassen sich mechanistisch durch einen Aufmerksamkeits-Kompromiss zwischen Sozial- und Umweltinformationen erklären. Im letzten Teil der Arbeit quantifiziere ich die kollektive Informationsverarbeitung im Feld. Das Studiensystem ist eine an sulfidische Wasserbedingungen angepasste Fischart mit einem kollektiven Fluchtverhalten vor Vögeln (wiederholte kollektive Fluchttauchgängen). Die Fische sind etwa 2 Zentimeter groß, aber die kollektive Welle breitet sich über Meter in dichten Schwärmen an der Oberfläche aus. Es zeigt sich, dass die Wellengeschwindigkeit schwach mit der Polarisation zunimmt, bei einer optimalen Dichte am schnellsten ist und von ihrer Richtung relativ zur Schwarmorientierung abhängt.In the first part, I focus on the self-organization to criticality (here an order-disorder phase transition) and investigate if evolution is a possible self-tuning mechanism. Does a simulated cohesive swarm that tries to avoid a pursuing predator self-tunes itself by evolution to the critical point to optimize avoidance? It turns out that (i) the best group avoidance is at criticality but (ii) not due to an enhanced response but because of structural changes (fundamentally linked to criticality), (iii) the group optimum is not an evolutionary stable state, in fact (iv) it is an evolutionary accelerator due to a maximal spatial self-sorting of individuals causing spatial selection. In the second part, I model experimentally observed differences in collective behavior of fish groups subject to multiple generation of different types of size-dependent selection. The real world analog to this experimental evolution is recreational fishery (small fish are released, large are consumed) and commercial fishing with large net widths (small/young individuals can escape). The results suggest that large harvesting reduces cohesion and risk taking of individuals. I show that both findings can be mechanistically explained based on an attention trade-off between social and environmental information. Furthermore, I numerically analyze how differently size-harvested groups perform in a natural predator and fishing scenario. In the last part of the thesis, I quantify the collective information processing in the field. The study system is a fish species adapted to sulfidic water conditions with a collective escape behavior from aerial predators which manifests in repeated collective escape dives. These fish measure about 2 centimeters, but the collective wave spreads across meters in dense shoals at the surface. I find that wave speed increases weakly with polarization, is fastest at an optimal density and depends on its direction relative to shoal orientation

Cognition-Based Networks: A New Perspective on Network Optimization Using Learning and Distributed Intelligence

IEEE Access Volume 3, 2015, Article number 7217798, Pages 1512-1530 Open Access Cognition-based networks: A new perspective on network optimization using learning and distributed intelligence (Article) Zorzi, M.a , Zanella, A.a, Testolin, A.b, De Filippo De Grazia, M.b, Zorzi, M.bc a Department of Information Engineering, University of Padua, Padua, Italy b Department of General Psychology, University of Padua, Padua, Italy c IRCCS San Camillo Foundation, Venice-Lido, Italy View additional affiliations View references (107) Abstract In response to the new challenges in the design and operation of communication networks, and taking inspiration from how living beings deal with complexity and scalability, in this paper we introduce an innovative system concept called COgnition-BAsed NETworkS (COBANETS). The proposed approach develops around the systematic application of advanced machine learning techniques and, in particular, unsupervised deep learning and probabilistic generative models for system-wide learning, modeling, optimization, and data representation. Moreover, in COBANETS, we propose to combine this learning architecture with the emerging network virtualization paradigms, which make it possible to actuate automatic optimization and reconfiguration strategies at the system level, thus fully unleashing the potential of the learning approach. Compared with the past and current research efforts in this area, the technical approach outlined in this paper is deeply interdisciplinary and more comprehensive, calling for the synergic combination of expertise of computer scientists, communications and networking engineers, and cognitive scientists, with the ultimate aim of breaking new ground through a profound rethinking of how the modern understanding of cognition can be used in the management and optimization of telecommunication network