Feature Grouping and Sparse Principal Component Analysis

Sparse Principal Component Analysis (SPCA) is widely used in data processing and dimension reduction; it uses the lasso to produce modified principal components with sparse loadings for better interpretability. However, sparse PCA never considers an additional grouping structure where the loadings share similar coefficients (i.e., feature grouping), besides a special group with all coefficients being zero (i.e., feature selection). In this paper, we propose a novel method called Feature Grouping and Sparse Principal Component Analysis (FGSPCA) which allows the loadings to belong to disjoint homogeneous groups, with sparsity as a special case. The proposed FGSPCA is a subspace learning method designed to simultaneously perform grouping pursuit and feature selection, by imposing a non-convex regularization with naturally adjustable sparsity and grouping effect. To solve the resulting non-convex optimization problem, we propose an alternating algorithm that incorporates the difference-of-convex programming, augmented Lagrange and coordinate descent methods. Additionally, the experimental results on real data sets show that the proposed FGSPCA benefits from the grouping effect compared with methods without grouping effect.Comment: 21 pages, 5 figures, 2 table

Robust PCA as Bilinear Decomposition with Outlier-Sparsity Regularization

Principal component analysis (PCA) is widely used for dimensionality reduction, with well-documented merits in various applications involving high-dimensional data, including computer vision, preference measurement, and bioinformatics. In this context, the fresh look advocated here permeates benefits from variable selection and compressive sampling, to robustify PCA against outliers. A least-trimmed squares estimator of a low-rank bilinear factor analysis model is shown closely related to that obtained from an $\ell_0$-(pseudo)norm-regularized criterion encouraging sparsity in a matrix explicitly modeling the outliers. This connection suggests robust PCA schemes based on convex relaxation, which lead naturally to a family of robust estimators encompassing Huber's optimal M-class as a special case. Outliers are identified by tuning a regularization parameter, which amounts to controlling sparsity of the outlier matrix along the whole robustification path of (group) least-absolute shrinkage and selection operator (Lasso) solutions. Beyond its neat ties to robust statistics, the developed outlier-aware PCA framework is versatile to accommodate novel and scalable algorithms to: i) track the low-rank signal subspace robustly, as new data are acquired in real time; and ii) determine principal components robustly in (possibly) infinite-dimensional feature spaces. Synthetic and real data tests corroborate the effectiveness of the proposed robust PCA schemes, when used to identify aberrant responses in personality assessment surveys, as well as unveil communities in social networks, and intruders from video surveillance data.Comment: 30 pages, submitted to IEEE Transactions on Signal Processin

A D.C. Programming Approach to the Sparse Generalized Eigenvalue Problem

In this paper, we consider the sparse eigenvalue problem wherein the goal is to obtain a sparse solution to the generalized eigenvalue problem. We achieve this by constraining the cardinality of the solution to the generalized eigenvalue problem and obtain sparse principal component analysis (PCA), sparse canonical correlation analysis (CCA) and sparse Fisher discriminant analysis (FDA) as special cases. Unlike the $\ell_1$-norm approximation to the cardinality constraint, which previous methods have used in the context of sparse PCA, we propose a tighter approximation that is related to the negative log-likelihood of a Student's t-distribution. The problem is then framed as a d.c. (difference of convex functions) program and is solved as a sequence of convex programs by invoking the majorization-minimization method. The resulting algorithm is proved to exhibit \emph{global convergence} behavior, i.e., for any random initialization, the sequence (subsequence) of iterates generated by the algorithm converges to a stationary point of the d.c. program. The performance of the algorithm is empirically demonstrated on both sparse PCA (finding few relevant genes that explain as much variance as possible in a high-dimensional gene dataset) and sparse CCA (cross-language document retrieval and vocabulary selection for music retrieval) applications.Comment: 40 page

Implementation of a local principal curves algorithm for neutrino interaction reconstruction in a liquid argon volume

A local principal curve algorithm has been implemented in three dimensions for automated track and shower reconstruction of neutrino interactions in a liquid argon time projection chamber. We present details of the algorithm and characterise its performance on simulated data sets.Comment: 14 pages, 17 figures; typing correction to Eq 5, the definition of the local covariance matri

Stochastic Parallel Block Coordinate Descent for Large-scale Saddle Point Problems

We consider convex-concave saddle point problems with a separable structure and non-strongly convex functions. We propose an efficient stochastic block coordinate descent method using adaptive primal-dual updates, which enables flexible parallel optimization for large-scale problems. Our method shares the efficiency and flexibility of block coordinate descent methods with the simplicity of primal-dual methods and utilizing the structure of the separable convex-concave saddle point problem. It is capable of solving a wide range of machine learning applications, including robust principal component analysis, Lasso, and feature selection by group Lasso, etc. Theoretically and empirically, we demonstrate significantly better performance than state-of-the-art methods in all these applications.Comment: Accepted by AAAI 201