Report of the Stanford Linked Data Workshop

The Stanford University Libraries and Academic Information Resources (SULAIR) with the Council on Library and Information Resources (CLIR) conducted at week-long workshop on the prospects for a large scale, multi-national, multi-institutional prototype of a Linked Data environment for discovery of and navigation among the rapidly, chaotically expanding array of academic information resources. As preparation for the workshop, CLIR sponsored a survey by Jerry Persons, Chief Information Architect emeritus of SULAIR that was published originally for workshop participants as background to the workshop and is now publicly available. The original intention of the workshop was to devise a plan for such a prototype. However, such was the diversity of knowledge, experience, and views of the potential of Linked Data approaches that the workshop participants turned to two more fundamental goals: building common understanding and enthusiasm on the one hand and identifying opportunities and challenges to be confronted in the preparation of the intended prototype and its operation on the other. In pursuit of those objectives, the workshop participants produced:1. a value statement addressing the question of why a Linked Data approach is worth prototyping;2. a manifesto for Linked Libraries (and Museums and Archives and …);3. an outline of the phases in a life cycle of Linked Data approaches;4. a prioritized list of known issues in generating, harvesting & using Linked Data;5. a workflow with notes for converting library bibliographic records and other academic metadata to URIs;6. examples of potential “killer apps” using Linked Data: and7. a list of next steps and potential projects.This report includes a summary of the workshop agenda, a chart showing the use of Linked Data in cultural heritage venues, and short biographies and statements from each of the participants

Ontology mapping: the state of the art

Ontology mapping is seen as a solution provider in today's landscape of ontology research. As the number of ontologies that are made publicly available and accessible on the Web increases steadily, so does the need for applications to use them. A single ontology is no longer enough to support the tasks envisaged by a distributed environment like the Semantic Web. Multiple ontologies need to be accessed from several applications. Mapping could provide a common layer from which several ontologies could be accessed and hence could exchange information in semantically sound manners. Developing such mapping has beeb the focus of a variety of works originating from diverse communities over a number of years. In this article we comprehensively review and present these works. We also provide insights on the pragmatics of ontology mapping and elaborate on a theoretical approach for defining ontology mapping

Learning in a Landscape: Simulation-building as Reflexive Intervention

This article makes a dual contribution to scholarship in science and technology studies (STS) on simulation-building. It both documents a specific simulation-building project, and demonstrates a concrete contribution to interdisciplinary work of STS insights. The article analyses the struggles that arise in the course of determining what counts as theory, as model and even as a simulation. Such debates are especially decisive when working across disciplinary boundaries, and their resolution is an important part of the work involved in building simulations. In particular, we show how ontological arguments about the value of simulations tend to determine the direction of simulation-building. This dynamic makes it difficult to maintain an interest in the heterogeneity of simulations and a view of simulations as unfolding scientific objects. As an outcome of our analysis of the process and reflections about interdisciplinary work around simulations, we propose a chart, as a tool to facilitate discussions about simulations. This chart can be a means to create common ground among actors in a simulation-building project, and a support for discussions that address other features of simulations besides their ontological status. Rather than foregrounding the chart's classificatory potential, we stress its (past and potential) role in discussing and reflecting on simulation-building as interdisciplinary endeavor. This chart is a concrete instance of the kinds of contributions that STS can make to better, more reflexive practice of simulation-building.Comment: 37 page

The future of metadata: open, linked, and multilingual – the YSO case

Peer reviewe

Enacting the Semantic Web: Ontological Orderings, Negotiated Standards, and Human-machine Translations

Artificial intelligence (AI) that is based upon semantic search has become one of the dominant means for accessing information in recent years. This is particularly the case in mobile contexts, as search based AI are embedded in each of the major mobile operating systems. The implications are such that information is becoming less a matter of choosing between different sets of results, and more of a presentation of a single answer, limiting both the availability of, and exposure to, alternate sources of information. Thus, it is essential to understand how that information comes to be structured and how deterministic systems like search based AI come to understand the indeterminate worlds they are tasked with interrogating. The semantic web, one of the technologies underpinning these systems, creates machine-readable data from the existing web of text and formalizes those machine-readable understandings in ontologies. This study investigates the ways that those semantic assemblages structure, and thus define, the world. In accordance with assemblage theory, it is necessary to study the interactions between the components that make up such data assemblages. As yet, the social sciences have been slow to systematically investigate data assemblages, the semantic web, and the components of these important socio-technical systems. This study investigates one major ontology, Schema.org. It uses netnographic methods to study the construction and use of Schema.org to determine how ontological states are declared and how human-machine translations occur in those development and use processes. This study has two main findings that bear on the relevant literature. First, I find that development and use of the ontology is a product of negotiations with technical standards such that ontologists and users must work around, with, and through the affordances and constraints of standards. Second, these groups adopt a pragmatic and generalizable approach to data modeling and semantic markup that determines ontological context in local and global ways. This first finding is significant in that past work has largely focused on how people work around standards’ limitations, whereas this shows that practitioners also strategically engage with standards to achieve their aims. Second, the particular approach that these groups use in translating human knowledge to machines, differs from the formalized and positivistic approaches described in past work. At a larger level, this study fills a lacuna in the collective understanding of how data assemblages are constructed and operate

Viewpoints on emergent semantics

Authors include:Philippe Cudr´e-Mauroux, and Karl Aberer (editors), Alia I. Abdelmoty, Tiziana Catarci, Ernesto Damiani, Arantxa Illaramendi, Robert Meersman, Erich J. Neuhold, Christine Parent, Kai-Uwe Sattler, Monica Scannapieco, Stefano Spaccapietra, Peter Spyns, and Guy De Tr´eWe introduce a novel view on how to deal with the problems of semantic interoperability in distributed systems. This view is based on the concept of emergent semantics, which sees both the representation of semantics and the discovery of the proper interpretation of symbols as the result of a self-organizing process performed by distributed agents exchanging symbols and having utilities dependent on the proper interpretation of the symbols. This is a complex systems perspective on the problem of dealing with semantics. We highlight some of the distinctive features of our vision and point out preliminary examples of its applicatio

The construction of a linguistic linked data framework for bilingual lexicographic resources

Little-known lexicographic resources can be of tremendous value to users once digitised. By extending the digitisation efforts for a lexicographic resource, converting the human readable digital object to a state that is also machine-readable, structured data can be created that is semantically interoperable, thereby enabling the lexicographic resource to access, and be accessed by, other semantically interoperable resources. The purpose of this study is to formulate a process when converting a lexicographic resource in print form to a machine-readable bilingual lexicographic resource applying linguistic linked data principles, using the English-Xhosa Dictionary for Nurses as a case study. This is accomplished by creating a linked data framework, in which data are expressed in the form of RDF triples and URIs, in a manner which allows for extensibility to a multilingual resource. Click languages with characters not typically represented by the Roman alphabet are also considered. The purpose of this linked data framework is to define each lexical entry as “historically dynamic”, instead of “ontologically static” (Rafferty, 2016:5). For a framework which has instances in constant evolution, focus is thus given to the management of provenance and linked data generation thereof. The output is an implementation framework which provides methodological guidelines for similar language resources in the interdisciplinary field of Library and Information Science

The INCF Digital Atlasing Program: Report on Digital Atlasing Standards in the Rodent Brain

The goal of the INCF Digital Atlasing Program is to provide the vision and direction necessary to make the rapidly growing collection of multidimensional data of the rodent brain (images, gene expression, etc.) widely accessible and usable to the international research community. This Digital Brain Atlasing Standards Task Force was formed in May 2008 to investigate the state of rodent brain digital atlasing, and formulate standards, guidelines, and policy recommendations.

Our first objective has been the preparation of a detailed document that includes the vision and specific description of an infrastructure, systems and methods capable of serving the scientific goals of the community, as well as practical issues for achieving
the goals. This report builds on the 1st INCF Workshop on Mouse and Rat Brain Digital Atlasing Systems (Boline et al., 2007, _Nature Preceedings_, doi:10.1038/npre.2007.1046.1) and includes a more detailed analysis of both the current state and desired state of digital atlasing along with specific recommendations for achieving these goals