Combining semantic web technologies with evolving fuzzy classifier eClass for EHR-based phenotyping : a feasibility study

In parallel to nation-wide efforts for setting up shared electronic health records (EHRs) across healthcare settings, several large-scale national and international projects are developing, validating, and deploying electronic EHR oriented phenotype algorithms that aim at large-scale use of EHRs data for genomic studies. A current bottleneck in using EHRs data for obtaining computable phenotypes is to transform the raw EHR data into clinically relevant features. The research study presented here proposes a novel combination of Semantic Web technologies with the on-line evolving fuzzy classifier eClass to obtain and validate EHR-driven computable phenotypes derived from 1956 clinical statements from EHRs. The evaluation performed with clinicians demonstrates the feasibility and practical acceptability of the approach proposed

Combining Fuzzy Logic and Semantic Web to Enable Situation-Awareness in Service Recommendation

Mobile Internet is rapidly growing and an enormous quantity of resources are currently available. Thus, the common mechanisms used up to now to locate resources, such as browsing and searching, do not look anymore to be effective in helping users in mobility. Indeed, the user's personal information space can be very large, with respect to the limited interaction capabilities of mobile devices. This paper proposes a situation-aware framework for providing personalized resources in a proactive manner. Current situations of the user are inferred by exploiting domain knowledge expressed in terms of ontologies and semantic rules, which are represented in the well-known Web Ontology Language (OWL) and Semantic Web Rule Language (SWRL), respectively. Uncertainty in some contextual rule conditions is handled by defining appropriate linguistic variables through the Fuzzy Control Language (FCL), a standard representation of fuzzy systems for data exchange among different implementations, and adopting a purposely-adapted coding of ontologies and rules. Uncertain conditions bring to infer more than one situation with different certainty degrees: these degrees are used to assign a rank to concurrent situations. Finally, situations are connected to a set of related resources to be recommended to the user

Cognitive Models and Computational Approaches for improving Situation Awareness Systems

2016 - 2017The world of Internet of Things is pervaded by complex environments with smart services available every time and everywhere. In such a context, a serious open issue is the capability of information systems to support adaptive and collaborative decision processes in perceiving and elaborating huge amounts of data. This requires the design and realization of novel socio-technical systems based on the “human-in-the-loop” paradigm. The presence of both humans and software in such systems demands for adequate levels of Situation Awareness (SA). To achieve and maintain proper levels of SA is a daunting task due to the intrinsic technical characteristics of systems and the limitations of human cognitive mechanisms. In the scientific literature, such issues hindering the SA formation process are defined as SA demons. The objective of this research is to contribute to the resolution of the SA demons by means of the identification of information processing paradigms for an original support to the SA and the definition of new theoretical and practical approaches based on cognitive models and computational techniques. The research work starts with an in-depth analysis and some preliminary verifications of methods, techniques, and systems of SA. A major outcome of this analysis is that there is only a limited use of the Granular Computing paradigm (GrC) in the SA field, despite the fact that SA and GrC share many concepts and principles. The research work continues with the definition of contributions and original results for the resolution of significant SA demons, exploiting some of the approaches identified in the analysis phase (i.e., ontologies, data mining, and GrC). The first contribution addresses the issues related to the bad perception of data by users. We propose a semantic approach for the quality-aware sensor data management which uses a data imputation technique based on association rule mining. The second contribution proposes an original ontological approach to situation management, namely the Adaptive Goal-driven Situation Management. The approach uses the ontological modeling of goals and situations and a mechanism that suggests the most relevant goals to the users at a given moment. Lastly, the adoption of the GrC paradigm allows the definition of a novel model for representing and reasoning on situations based on a set theoretical framework. This model has been instantiated using the rough sets theory. The proposed approaches and models have been implemented in prototypical systems. Their capabilities in improving SA in real applications have been evaluated with typical methodologies used for SA systems. [edited by Author]XXX cicl

An infrastructure for context-dependent RDF data replication on mobile devices

Der im Rahmen dieser Arbeit vorgestellte Ansatz beschreibt die Erstellung einer technischen Infrastruktur, die selektiv RDF-Daten in Abhängigkeit der Informationsbedürfnisse und den unterschiedlichen Kontexten mobiler Nutzer auf ein mobiles Endgerät repliziert und diese somit in intelligenter Art und Weise unterstützt. Eine Zusammenführung kontextspezifischer Konzepte und semantischer Technologien stellt einen wesentlichen Bestandteil zur Verbesserung der mobilen Informationssuche dar und erhöht gleichzeitig die Präzision mobiler Informationsgewinnungsprozesse. Trotz des vorhandenen Potentials einer proaktiven, kontextabhängigen Replizierung von RDF-Daten, gestaltet sich die Verarbeitung auf mobilen Endgeräten schwierig. Die Gründe dafür liegen in den technischen und netzwerkspezifischen Beschränkungen, in der fehlenden Verarbeitungs- und Verwaltungsfunktionalität von ontologiebasierten Beschreibungsverfahren sowie in der Unzulänglichkeit bestehender Replikationsansätze, sich an verändernde Informationsbedürfnisse sowie an unterschiedliche technische, umgebungsspezifische und infrastrukturbezogene Eigenheiten anzupassen. Verstärkt wird diese Problematik durch das Fehlen ausdrucksstarker Beschreibungsverfahren zur Repräsentation kontextspezifischer Daten. Existierende Ansätze leiden dementsprechend unter der Verwendung proprietärer Datenformate, dem Einsatz serverabhängiger Applikationsinfrastrukturen sowie dem Unvermögen, kontextspezifische Daten auszutauschen. Dies äußert sich in Studien, welche die Berücksichtigung der Informationsbedürfnisse mobiler Nutzer als unzureichend einstuft und einen Großteil der benötigten Informationen als kontextrelevant auszeichnet. Obgleich Fortschritte bei der Adaption von semantischen Technologien und Beschreibungsverfahren zur kontextabhängigen Verarbeitung zu erkennen sind, bleibt eine auf semantische Technologien basierende, proaktive Replizierung von RDF-Daten auf mobile Endgeräte ein offenes Forschungsfeld. Die vorliegende Arbeit diskutiert Möglichkeiten zur Erweiterung der mobilen, kontextspezifischen Datenverarbeitung durch semantische Technologien und beinhaltet eine vergleichende Studie zur Leistungsfähigkeit aktueller mobiler RDF-Frameworks. Kernpunkt ist die formale Beschreibung eines abstrakten Modells zur effizienten Akquise, Repräsentation, Verwaltung und Verarbeitung von Kontextinformationen unter Berücksichtigung der technischen Gegebenheiten mobiler Informationssysteme. Ergänzt wird es durch die formale Spezifikation eines nebenläufigen, transaktionsbasierten Verarbeitungsmodells, welches Vollständigkeits- und Konsistenzbedingungen auf Daten- und Prozessebene berücksichtigt. Der praktische Nutzen des vorliegenden Ansatzes wird anhand typischer Informationsbedürfnisse eines Wissensarbeiters demonstriert. Der Ansatz reduziert Abhängigkeiten zu externen Systemen und ermöglicht Nutzern, unabhängig von zeitlichen, örtlichen und netzwerkspezifischen Gegebenheiten, auf die für sie relevanten Daten zuzugreifen und diese zu verarbeiten. Durch die lokale Verarbeitung kontextbezogener Daten wird sowohl die Privatssphäre des Nutzers gewahrt als auch sicherheitsrelevanten Aspekten Rechnung getragen.This work describes an infrastructure for the selective RDF data replication to mobile devices while considering current and future information needs of mobile users and the different contexts they are operating in. It presents a novel approach in synthesizing context-aware computing concepts with semantic technologies and distributed transaction management concepts for intelligently assisting mobile users while enhancing mobile information seeking behavior and increasing the precision of mobile information retrieval processes. Despite the huge potential of a proactive, context-dependent replication of RDF data, such data can not be efficiently processed on mobile devices due to (i) technical limitations and network-related constraints, (ii) missing processing and management capabilities of ontology-based description frameworks, (iii) the inability of traditional data replication strategies to adapt to changing user information needs and to consider technical, environmental, and infrastructural restrictions of mobile operating systems, and (iv) the dynamic and emergent nature of context, which requires flexible and extensible description frameworks that allow for elaborating on the semantics of contextual constellations as well as on the relationships that exist between them. As a consequence, existing approaches suffer from the deployment of proprietary data formats, server-dependent application infrastructures, and the inability to share and exchange contextual information across system borders. Moreover, results of recently conducted studies reveal that mobile users find their information needs inadequately addressed, where a large share can be attributed as context or context-relevant. Although progress has been made in applying semantic technologies, concepts, and languages to the domain of context-aware computing, a synthesis of those fields for the proactive provision of RDF data replicas on mobile devices remains an open research issue. This work discusses possible fields where context-aware computing can be enhanced using technologies, languages, and concepts from the Semantic Web and contains a comparative study about the performance of current mobile RDF frameworks in replication-specific tasks. The main contribution of this thesis is a formal description of an abstract model that allows for an efficient acquisition, representation, management, and processing of contextual information while taking into account the peculiarities and operating environments of mobile information systems. It is complemented by a formal specification of a concurrently operating transaction-based processing model that considers completeness and consistency requirements on data and process level. We demonstrate the practicability of the presented approach trough a prototypical implementation of context and data providers that satisfy typical information needs of a mobile knowledge worker. As a consequence, dependencies to external systems are reduced and users are equipped with relevant information that adheres to their information needs anywhere and at any time, independent of any network-related constraints. Since context-relevant data are processed directly on a mobile device, security and privacy issues are preserved