Data locality in Hadoop

Current market tendencies show the need of storing and processing rapidly growing amounts of data. Therefore, it implies the demand for distributed storage and data processing systems. The Apache Hadoop is an open-source framework for managing such computing clusters in an effective, fault-tolerant way. Dealing with large volumes of data, Hadoop, and its storage system HDFS (Hadoop Distributed File System), face challenges to keep the high efficiency with computing in a reasonable time. The typical Hadoop implementation transfers computation to the data, rather than shipping data across the cluster. Otherwise, moving the big quantities of data through the network could significantly delay data processing tasks. However, while a task is already running, Hadoop favours local data access and chooses blocks from the nearest nodes. Next, the necessary blocks are moved just when they are needed in the given ask. For supporting the Hadoop’s data locality preferences, in this thesis, we propose adding an innovative functionality to its distributed file system (HDFS), that enables moving data blocks on request. In-advance shipping of data makes it possible to forcedly redistribute data between nodes in order to easily adapt it to the given processing tasks. New functionality enables the instructed movement of data blocks within the cluster. Data can be shifted either by user running the proper HDFS shell command or programmatically by other module like an appropriate scheduler. In order to develop such functionality, the detailed analysis of Apache Hadoop source code and its components (specifically HDFS) was conducted. Research resulted in a deep understanding of internal architecture, what made it possible to compare the possible approaches to achieve the desired solution, and develop the chosen one

Fast Data in the Era of Big Data: Twitter's Real-Time Related Query Suggestion Architecture

We present the architecture behind Twitter's real-time related query suggestion and spelling correction service. Although these tasks have received much attention in the web search literature, the Twitter context introduces a real-time "twist": after significant breaking news events, we aim to provide relevant results within minutes. This paper provides a case study illustrating the challenges of real-time data processing in the era of "big data". We tell the story of how our system was built twice: our first implementation was built on a typical Hadoop-based analytics stack, but was later replaced because it did not meet the latency requirements necessary to generate meaningful real-time results. The second implementation, which is the system deployed in production, is a custom in-memory processing engine specifically designed for the task. This experience taught us that the current typical usage of Hadoop as a "big data" platform, while great for experimentation, is not well suited to low-latency processing, and points the way to future work on data analytics platforms that can handle "big" as well as "fast" data

Parallel detrended fluctuation analysis for fast event detection on massive PMU data

("(c) 2015 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other users, including reprinting/ republishing this material for advertising or promotional purposes, creating new collective works for resale or redistribution to servers or lists, or reuse of any copyrighted components of this work in other works.")Phasor measurement units (PMUs) are being rapidly deployed in power grids due to their high sampling rates and synchronized measurements. The devices high data reporting rates present major computational challenges in the requirement to process potentially massive volumes of data, in addition to new issues surrounding data storage. Fast algorithms capable of processing massive volumes of data are now required in the field of power systems. This paper presents a novel parallel detrended fluctuation analysis (PDFA) approach for fast event detection on massive volumes of PMU data, taking advantage of a cluster computing platform. The PDFA algorithm is evaluated using data from installed PMUs on the transmission system of Great Britain from the aspects of speedup, scalability, and accuracy. The speedup of the PDFA in computation is initially analyzed through Amdahl's Law. A revision to the law is then proposed, suggesting enhancements to its capability to analyze the performance gain in computation when parallelizing data intensive applications in a cluster computing environment

Scientific Computing Meets Big Data Technology: An Astronomy Use Case

Scientific analyses commonly compose multiple single-process programs into a dataflow. An end-to-end dataflow of single-process programs is known as a many-task application. Typically, tools from the HPC software stack are used to parallelize these analyses. In this work, we investigate an alternate approach that uses Apache Spark -- a modern big data platform -- to parallelize many-task applications. We present Kira, a flexible and distributed astronomy image processing toolkit using Apache Spark. We then use the Kira toolkit to implement a Source Extractor application for astronomy images, called Kira SE. With Kira SE as the use case, we study the programming flexibility, dataflow richness, scheduling capacity and performance of Apache Spark running on the EC2 cloud. By exploiting data locality, Kira SE achieves a 2.5x speedup over an equivalent C program when analyzing a 1TB dataset using 512 cores on the Amazon EC2 cloud. Furthermore, we show that by leveraging software originally designed for big data infrastructure, Kira SE achieves competitive performance to the C implementation running on the NERSC Edison supercomputer. Our experience with Kira indicates that emerging Big Data platforms such as Apache Spark are a performant alternative for many-task scientific applications

A Framework for Genetic Algorithms Based on Hadoop

Genetic Algorithms (GAs) are powerful metaheuristic techniques mostly used in many real-world applications. The sequential execution of GAs requires considerable computational power both in time and resources. Nevertheless, GAs are naturally parallel and accessing a parallel platform such as Cloud is easy and cheap. Apache Hadoop is one of the common services that can be used for parallel applications. However, using Hadoop to develop a parallel version of GAs is not simple without facing its inner workings. Even though some sequential frameworks for GAs already exist, there is no framework supporting the development of GA applications that can be executed in parallel. In this paper is described a framework for parallel GAs on the Hadoop platform, following the paradigm of MapReduce. The main purpose of this framework is to allow the user to focus on the aspects of GA that are specific to the problem to be addressed, being sure that this task is going to be correctly executed on the Cloud with a good performance. The framework has been also exploited to develop an application for Feature Subset Selection problem. A preliminary analysis of the performance of the developed GA application has been performed using three datasets and shown very promising performance

The Family of MapReduce and Large Scale Data Processing Systems

In the last two decades, the continuous increase of computational power has produced an overwhelming flow of data which has called for a paradigm shift in the computing architecture and large scale data processing mechanisms. MapReduce is a simple and powerful programming model that enables easy development of scalable parallel applications to process vast amounts of data on large clusters of commodity machines. It isolates the application from the details of running a distributed program such as issues on data distribution, scheduling and fault tolerance. However, the original implementation of the MapReduce framework had some limitations that have been tackled by many research efforts in several followup works after its introduction. This article provides a comprehensive survey for a family of approaches and mechanisms of large scale data processing mechanisms that have been implemented based on the original idea of the MapReduce framework and are currently gaining a lot of momentum in both research and industrial communities. We also cover a set of introduced systems that have been implemented to provide declarative programming interfaces on top of the MapReduce framework. In addition, we review several large scale data processing systems that resemble some of the ideas of the MapReduce framework for different purposes and application scenarios. Finally, we discuss some of the future research directions for implementing the next generation of MapReduce-like solutions.Comment: arXiv admin note: text overlap with arXiv:1105.4252 by other author