The ROC Curves of Fused Independent Classification Systems

The need for optimal target detection arises in many different fields. Due to the complexity of many targets, it is thought that the combination of multiple classification systems, which can be tuned to several individual target attributes or features, might lead to more optimal target detection performance. The ROC curves of fused independent two-label classification systems may be generated by the mathematical combination of their ROC curves to achieve optimal classifier performance without the need to test every Boolean combination. The monotonic combination of two-label independent classification systems which assign labels to the same target types results in a lattice of ROC curves which are epimorphic to the corresponding combinations of classification systems. Provided the ROC curves of individual systems are available, testing the lattice of ROC curves in software with existing individual ROC curves can represent a significant cost savings in the design of optimal classification systems

Naive Bayes vs. Decision Trees vs. Neural Networks in the Classification of Training Web Pages

Web classification has been attempted through many different technologies. In this study we concentrate on the comparison of Neural Networks (NN), Naïve Bayes (NB) and Decision Tree (DT) classifiers for the automatic analysis and classification of attribute data from training course web pages. We introduce an enhanced NB classifier and run the same data sample through the DT and NN classifiers to determine the success rate of our classifier in the training courses domain. This research shows that our enhanced NB classifier not only outperforms the traditional NB classifier, but also performs similarly as good, if not better, than some more popular, rival techniques. This paper also shows that, overall, our NB classifier is the best choice for the training courses domain, achieving an impressive F-Measure value of over 97%, despite it being trained with fewer samples than any of the classification systems we have encountered

EnHMM: On the Use of Ensemble HMMs and Stack Traces to Predict the Reassignment of Bug Report Fields

Bug reports (BR) contain vital information that can help triaging teams prioritize and assign bugs to developers who will provide the fixes. However, studies have shown that BR fields often contain incorrect information that need to be reassigned, which delays the bug fixing process. There exist approaches for predicting whether a BR field should be reassigned or not. These studies use mainly BR descriptions and traditional machine learning algorithms (SVM, KNN, etc.). As such, they do not fully benefit from the sequential order of information in BR data, such as function call sequences in BR stack traces, which may be valuable for improving the prediction accuracy. In this paper, we propose a novel approach, called EnHMM, for predicting the reassignment of BR fields using ensemble Hidden Markov Models (HMMs), trained on stack traces. EnHMM leverages the natural ability of HMMs to represent sequential data to model the temporal order of function calls in BR stack traces. When applied to Eclipse and Gnome BR repositories, EnHMM achieves an average precision, recall, and F-measure of 54%, 76%, and 60% on Eclipse dataset and 41%, 69%, and 51% on Gnome dataset. We also found that EnHMM improves over the best single HMM by 36% for Eclipse and 76% for Gnome. Finally, when comparing EnHMM to Im.ML.KNN, a recent approach in the field, we found that the average F-measure score of EnHMM improves the average F-measure of Im.ML.KNN by 6.80% and improves the average recall of Im.ML.KNN by 36.09%. However, the average precision of EnHMM is lower than that of Im.ML.KNN (53.93% as opposed to 56.71%).Comment: Published in Proceedings of the 28th IEEE International Conference on Software Analysis, Evolution and Reengineering (SANER 2021), 11 pages, 7 figure

Interpretable multiclass classification by MDL-based rule lists

Interpretable classifiers have recently witnessed an increase in attention from the data mining community because they are inherently easier to understand and explain than their more complex counterparts. Examples of interpretable classification models include decision trees, rule sets, and rule lists. Learning such models often involves optimizing hyperparameters, which typically requires substantial amounts of data and may result in relatively large models. In this paper, we consider the problem of learning compact yet accurate probabilistic rule lists for multiclass classification. Specifically, we propose a novel formalization based on probabilistic rule lists and the minimum description length (MDL) principle. This results in virtually parameter-free model selection that naturally allows to trade-off model complexity with goodness of fit, by which overfitting and the need for hyperparameter tuning are effectively avoided. Finally, we introduce the Classy algorithm, which greedily finds rule lists according to the proposed criterion. We empirically demonstrate that Classy selects small probabilistic rule lists that outperform state-of-the-art classifiers when it comes to the combination of predictive performance and interpretability. We show that Classy is insensitive to its only parameter, i.e., the candidate set, and that compression on the training set correlates with classification performance, validating our MDL-based selection criterion

ICLabel: An automated electroencephalographic independent component classifier, dataset, and website

The electroencephalogram (EEG) provides a non-invasive, minimally restrictive, and relatively low cost measure of mesoscale brain dynamics with high temporal resolution. Although signals recorded in parallel by multiple, near-adjacent EEG scalp electrode channels are highly-correlated and combine signals from many different sources, biological and non-biological, independent component analysis (ICA) has been shown to isolate the various source generator processes underlying those recordings. Independent components (IC) found by ICA decomposition can be manually inspected, selected, and interpreted, but doing so requires both time and practice as ICs have no particular order or intrinsic interpretations and therefore require further study of their properties. Alternatively, sufficiently-accurate automated IC classifiers can be used to classify ICs into broad source categories, speeding the analysis of EEG studies with many subjects and enabling the use of ICA decomposition in near-real-time applications. While many such classifiers have been proposed recently, this work presents the ICLabel project comprised of (1) an IC dataset containing spatiotemporal measures for over 200,000 ICs from more than 6,000 EEG recordings, (2) a website for collecting crowdsourced IC labels and educating EEG researchers and practitioners about IC interpretation, and (3) the automated ICLabel classifier. The classifier improves upon existing methods in two ways: by improving the accuracy of the computed label estimates and by enhancing its computational efficiency. The ICLabel classifier outperforms or performs comparably to the previous best publicly available method for all measured IC categories while computing those labels ten times faster than that classifier as shown in a rigorous comparison against all other publicly available EEG IC classifiers.Comment: Intended for NeuroImage. Updated from version one with minor editorial and figure change

Learning from imbalanced data in face re-identification using ensembles of classifiers

Face re-identification is a video surveillance application where systems for video-to-video face recognition are designed using faces of individuals captured from video sequences, and seek to recognize them when they appear in archived or live videos captured over a network of video cameras. Video-based face recognition applications encounter challenges due to variations in capture conditions such as pose, illumination etc. Other challenges in this application are twofold; 1) the imbalanced data distributions between the face captures of the individuals to be re-identified and those of other individuals 2) varying degree of imbalance during operations w.r.t. the design data. Learning from imbalanced data is challenging in general due in part to the bias of performance in most two-class classification systems towards correct classification of the majority (negative, or non-target) class (face images/frames captured from the individuals in not to be re-identified) better than the minority (positive, or target) class (face images/frames captured from the individual to be re-identified) because most two-class classification systems are intended to be used under balanced data condition. Several techniques have been proposed in the literature to learn from imbalanced data that either use data-level techniques to rebalance data (by under-sampling the majority class, up-sampling the minority class, or both) for training classifiers or use algorithm-level methods to guide the learning process (with or without cost sensitive approaches) such that the bias of performance towards correct classification of the majority class is neutralized. Ensemble techniques such as Bagging and Boosting algorithms have been shown to efficiently utilize these methods to address imbalance. However, there are issues faced by these techniques in the literature: (1) some informative samples may be neglected by random under-sampling and adding synthetic positive samples through upsampling adds to training complexity, (2) cost factors must be pre-known or found, (3) classification systems are often optimized and compared using performance measurements (like accuracy) that are unsuitable for imbalance problem; (4) most learning algorithms are designed and tested on a fixed imbalance level of data, which may differ from operational scenarios; The objective of this thesis is to design specialized classifier ensembles to address the issue of imbalance in the face re-identification application and as sub-goals avoiding the abovementioned issues faced in the literature. In addition achieving an efficient classifier ensemble requires a learning algorithm to design and combine component classifiers that hold suitable diversity-accuracy trade off. To reach the objective of the thesis, four major contributions are made that are presented in three chapters summarized in the following. In Chapter 3, a new application-based sampling method is proposed to group samples for under-sampling in order to improve diversity-accuracy trade-off between classifiers of the ensemble. The proposed sampling method takes the advantage of the fact that in face re-identification applications, facial regions of a same person appearing in a camera field of view may be regrouped based on their trajectories found by face tracker. A partitional Bagging ensemble method is proposed that accounts for possible variations in imbalance level of the operational data by combining classifiers that are trained on different imbalance levels. In this method, all samples are used for training classifiers and information loss is therefore avoided. In Chapter 4, a new ensemble learning algorithm called Progressive Boosting (PBoost) is proposed that progressively inserts uncorrelated groups of samples into a Boosting procedure to avoid loosing information while generating a diverse pool of classifiers. From one iteration to the next, the PBoost algorithm accumulates these uncorrelated groups of samples into a set that grows gradually in size and imbalance. This algorithm is more sophisticated than the one proposed in Chapter 3 because instead of training the base classifiers on this set, the base classifiers are trained on balanced subsets sampled from this set and validated on the whole set. Therefore, the base classifiers are more accurate while the robustness to imbalance is not jeopardized. In addition, the sample selection is based on the weights that are assigned to samples which correspond to their importance. In addition, the computation complexity of PBoost is lower than Boosting ensemble techniques in the literature for learning from imbalanced data because not all of the base classifiers are validated on all negative samples. A new loss factor is also proposed to be used in PBoost to avoid biasing performance towards the negative class. Using this loss factor, the weight update of samples and classifier contribution in final predictions are set according to the ability of classifiers to recognize both classes. In comparing the performance of the classifier systems in Chapter 3 and 4, a need is faced for an evaluation space that compares classifiers in terms of a suitable performance metric over all of their decision thresholds, different imbalance levels of test data, and different preference between classes. The F-measure is often used to evaluate two-class classifiers on imbalanced data, and no global evaluation space was available in the literature for this measure. Therefore, in Chapter 5, a new global evaluation space for the F-measure is proposed that is analogous to the cost curves for expected cost. In this space, a classifier is represented as a curve that shows its performance over all of its decision thresholds and a range of possible imbalance levels for the desired preference of true positive rate to precision. These properties are missing in ROC and precision-recall spaces. This space also allows us to empirically improve the performance of specialized ensemble learning methods for imbalance under a given operating condition. Through a validation, the base classifiers are combined using a modified version of the iterative Boolean combination algorithm such that the selection criterion in this algorithm is replaced by F-measure instead of AUC, and the combination is carried out for each operating condition. The proposed approaches in this thesis were validated and compared using synthetic data and videos from the Faces In Action, and COX datasets that emulate face re-identification applications. Results show that the proposed techniques outperforms state of the art techniques over different levels of imbalance and overlap between classes

Machine learning based data pre-processing for the purpose of medical data mining and decision support

Building an accurate and reliable model for prediction for different application domains, is one of the most significant challenges in knowledge discovery and data mining. Sometimes, improved data quality is itself the goal of the analysis, usually to improve processes in a production database and the designing of decision support. As medicine moves forward there is a need for sophisticated decision support systems that make use of data mining to support more orthodox knowledge engineering and Health Informatics practice. However, the real-life medical data rarely complies with the requirements of various data mining tools. It is often inconsistent, noisy, containing redundant attributes, in an unsuitable format, containing missing values and imbalanced with regards to the outcome class label.Many real-life data sets are incomplete, with missing values. In medical data mining the problem with missing values has become a challenging issue. In many clinical trials, the medical report pro-forma allow some attributes to be left blank, because they are inappropriate for some class of illness or the person providing the information feels that it is not appropriate to record the values for some attributes. The research reported in this thesis has explored the use of machine learning techniques as missing value imputation methods. The thesis also proposed a new way of imputing missing value by supervised learning. A classifier was used to learn the data patterns from a complete data sub-set and the model was later used to predict the missing values for the full dataset. The proposed machine learning based missing value imputation was applied on the thesis data and the results are compared with traditional Mean/Mode imputation. Experimental results show that all the machine learning methods which we explored outperformed the statistical method (Mean/Mode).The class imbalance problem has been found to hinder the performance of learning systems. In fact, most of the medical datasets are found to be highly imbalance in their class label. The solution to this problem is to reduce the gap between the minority class samples and the majority class samples. Over-sampling can be applied to increase the number of minority class sample to balance the data. The alternative to over-sampling is under-sampling where the size of majority class sample is reduced. The thesis proposed one cluster based under-sampling technique to reduce the gap between the majority and minority samples. Different under-sampling and over-sampling techniques were explored as ways to balance the data. The experimental results show that for the thesis data the new proposed modified cluster based under-sampling technique performed better than other class balancing techniques.In further research it is found that the class imbalance problem not only affects the classification performance but also has an adverse effect on feature selection. The thesis proposed a new framework for feature selection for class imbalanced datasets. The research found that, using the proposed framework the classifier needs less attributes to show high accuracy, and more attributes are needed if the data is highly imbalanced.The research described in the thesis contains the flowing four novel main contributions.a) Improved data mining methodology for mining medical datab) Machine learning based missing value imputation methodc) Cluster Based semi-supervised class balancing methodd) Feature selection framework for class imbalance datasetsThe performance analysis and comparative study show that the use of proposed method of missing value imputation, class balancing and feature selection framework can provide an effective approach to data preparation for building medical decision support