A Survey on Service Composition Middleware in Pervasive Environments

The development of pervasive computing has put the light on a challenging problem: how to dynamically compose services in heterogeneous and highly changing environments? We propose a survey that defines the service composition as a sequence of four steps: the translation, the generation, the evaluation, and finally the execution. With this powerful and simple model we describe the major service composition middleware. Then, a classification of these service composition middleware according to pervasive requirements - interoperability, discoverability, adaptability, context awareness, QoS management, security, spontaneous management, and autonomous management - is given. The classification highlights what has been done and what remains to do to develop the service composition in pervasive environments

A Real-Time Service-Oriented Architecture for Industrial Automation

Industrial automation platforms are experiencing a paradigm shift. New technologies are making their way in the area, including embedded real-time systems, standard local area networks like Ethernet, Wi-Fi and ZigBee, IP-based communication protocols, standard service oriented architectures (SOAs) and Web services. An automation system will be composed of flexible autonomous components with plug & play functionality, self configuration and diagnostics, and autonomic local control that communicate through standard networking technologies. However, the introduction of these new technologies raises important problems that need to be properly solved, one of these being the need to support real-time and quality-of-service (QoS) for real-time applications. This paper describes a SOA enhanced with real-time capabilities for industrial automation. The proposed architecture allows for negotiation of the QoS requested by clients from Web services, and provides temporal encapsulation of individual activities. This way, it is possible to perform an a priori analysis of the temporal behavior of each service, and to avoid unwanted interference among them. After describing the architecture, experimental results gathered on a real implementation of the framework (which leverages a soft real-time scheduler for the Linux kernel) are presented, showing the effectiveness of the proposed solution. The experiments were performed on simple case studies designed in the context of industrial automation applications

SLAng: A language for defining service level agreements

Application or web services are increasingly being used across organisational boundaries. Moreover, new services are being introduced at the network and storage level. Languages to specify interfaces for such services have been researched and transferred into industrial practice. We investigate end-to-end quality of service (QoS) and highlight that QoS provision has multiple facets and requires complex agreements between network services, storage services and middleware services. We introduce SLAng, a language for defining Service Level Agreements (SLAs) that accommodates these needs. We illustrate how SLAng is used to specify QoS in a case study that uses a web services specification to support the processing of images across multiple domains and we evaluate our language based on it

Composing Systemic Aspects into Component-Oriented DOC Middleware

The advent and maturation of component-based middleware frameworks have sim-plified the development of large-scale distributed applications by separating system devel-opment and configuration concerns into different aspects that can be specified and com-posed at various stages of the application development lifecycle. Conventional component middleware technologies, such as J2EE [73] and .NET [34], were designed to meet the quality of service (QoS) requirements of enterprise applications, which focus largely on scalability and reliability. Therefore, conventional component middleware specifications and implementations are not well suited for distributed real-time and embedded (DRE) ap-plications with more stringent QoS requirements, such as low latency/jitter, timeliness, and online fault recovery. In the DRE system development community, a new generation of enhanced commercial off-the-shelf (COTS) middleware, such as Real-time CORBA 1.0 (RT-CORBA)[39], is increasingly gaining acceptance as (1) the cost and time required to develop and verify DRE applications precludes developers from implementing complex DRE applications from scratch and (2) implementations of standard COTS middleware specifications mature and encompass key QoS properties needed by DRE systems. However, although COTS middleware standardizes mechanisms to configure and control underlying OS support for an application’s QoS requirements, it does not yet provide sufficient abstractions to separate QoS policy configurations such as real-time performance requirements, from application functionality. Developers are therefore forced to configure QoS policies in an ad hoc way, and the code to configure these policies is often scattered throughout and tangled with other parts of a DRE system. As a result, it is hard for developers to configure, validate, modify, and evolve complex DRE systems consistently. It is therefore necessary to create a new generation of QoS-enabled component middleware that provides more comprehensive support for addressing QoS-related concerns modularly, so that they can be introduced and configured as separate systemic aspects. By analyzing and identifying the limitations of applying conventional middleware technologies for DRE applications, this dissertation presents a new design and its associated techniques for enhancing conventional component-oriented middleware to provide programmability of DRE relevant real-time QoS concerns. This design is realized in an implementation of the standard CORBA Component Model (CCM) [38], called the Component-Integrated ACE ORB (CIAO). This dissertation also presents both architectural analysis and empirical results that demonstrate the effectiveness of this approach. This dissertation provides three contributions to the state of the art in composing systemic behaviors into component middleware frameworks. First, it illustrates how component middleware can simplify development and evolution of DRE applications while ensuring stringent QoS requirements by composing systemic QoS aspects. Second, it contributes to the design and implementation of QoS-enabled CCM by analyzing and documenting how systemic behaviors can be composed into component middleware. Finally, it presents empirical and analytical results to demonstrate the effectiveness and the advantage of composing systemic behaviors in component middleware. The work in this dissertation has a broader impact beyond the CCM in which it was developed, as it can be applied to other component-base middleware technologies which wish to support DRE applications

Customizing Component Middleware for Distributed Real-Time Systems with Aperiodic and Periodic Tasks

Many distributed real-time applications must handle mixed aperiodic and periodic tasks with diverse requirements. However, existing middleware lacks flexible configuration mechanisms needed to manage end-to-end timing easily for a wide range of different applications with both aperiodic and periodic tasks. The primary contribution of this work is the design, implementation and performance evaluation of the first configurable component middleware services for admission control and load balancing of aperiodic and periodic tasks in distributed real-time systems. Empirical results demonstrate the need for, and the effectiveness of, our configurable component middleware approach in supporting different applications with aperiodic and periodic tasks

Software infrastructure for wireless sensor and actuator networks

In the development of large ad-hoc Wireless Sensor and Actuator Agent Networks (SANETS), a multitude of disparate problems are faced. In order for these networks to function, software must be able to effectively manage: unreliable dynamic distributed communication, the power constraints of un-wired devices, failure of hardware devices in hostile environments and the remote allocation of distributed processing tasks throughout the network. The solutions to these problems must be solved in a highly scalable manner. The paper describes the process of analysis of the requirements and presents a design of a service-oriented software infrastructure (middleware) solution for scalable ad-hoc networks, in a context of a system made of mobile sensors and actuators. © 2011 IEEE

Roadmap Analysis of Protein-Protein Interactions. Master\u27s Thesis, August 2007

The ability to effectively model the interaction between proteins is an important and open problem. In molecular biology it is well accepted that from sequence arises form and from form arises function but relating structure to function remains a challenge. The function of a given protein is defined by its interactions. Likewise a malfunction or a change in protein-protein interactions is a hallmark of many diseases. Many researchers are studying the mechanisms of protein-protein interactions and one of the overarching goals of the community is to predict whether two proteins will bind, and if so what the final conformation will be. Attention is seldom paid to the association pathways that allow two proteins to bind. Evidence has shown that the information in the association pathways can play a vital role in understanding the interaction itself. This thesis presents a novel and scalable approach to computing association pathways between two proteins using the Probabilistic Roadmap (PRM) framework. We will discuss the challenges in extending PRM to the domain of protein-protein interactions such as performing structural mappings in a reduced space of flexibility, and sampling high dimensional conformation spaces. We will present analysis of individual association pathways as well as methods for estimating collective properties of the energy landscape. Our results indicate that these methods can discriminate between true and false protein binding interfaces. Finally, we will present condensing methods such as pathway clustering and visualization using dimensionality reduction that can be be applied to create compact representations of the interaction space