Computational fluid dynamics

An overview of computational fluid dynamics (CFD) activities at the Langley Research Center is given. The role of supercomputers in CFD research, algorithm development, multigrid approaches to computational fluid flows, aerodynamics computer programs, computational grid generation, turbulence research, and studies of rarefied gas flows are among the topics that are briefly surveyed

JDFTx: software for joint density-functional theory

Density-functional theory (DFT) has revolutionized computational prediction of atomic-scale properties from first principles in physics, chemistry and materials science. Continuing development of new methods is necessary for accurate predictions of new classes of materials and properties, and for connecting to nano- and mesoscale properties using coarse-grained theories. JDFTx is a fully-featured open-source electronic DFT software designed specifically to facilitate rapid development of new theories, models and algorithms. Using an algebraic formulation as an abstraction layer, compact C++11 code automatically performs well on diverse hardware including GPUs. This code hosts the development of joint density-functional theory (JDFT) that combines electronic DFT with classical DFT and continuum models of liquids for first-principles calculations of solvated and electrochemical systems. In addition, the modular nature of the code makes it easy to extend and interface with, facilitating the development of multi-scale toolkits that connect to ab initio calculations, e.g. photo-excited carrier dynamics combining electron and phonon calculations with electromagnetic simulations.Comment: 9 pages, 3 figures, 2 code listing

Neural networks, error-correcting codes, and polynomials over the binary n-cube

Several ways of relating the concept of error-correcting codes to the concept of neural networks are presented. Performing maximum-likelihood decoding in a linear block error-correcting code is shown to be equivalent to finding a global maximum of the energy function of a certain neural network. Given a linear block code, a neural network can be constructed in such a way that every codeword corresponds to a local maximum. The connection between maximization of polynomials over the n-cube and error-correcting codes is also investigated; the results suggest that decoding techniques can be a useful tool for solving such maximization problems. The results are generalized to both nonbinary and nonlinear codes

Automatic implementation of material laws: Jacobian calculation in a finite element code with TAPENADE

In an effort to increase the versatility of finite element codes, we explore the possibility of automatically creating the Jacobian matrix necessary for the gradient-based solution of nonlinear systems of equations. Particularly, we aim to assess the feasibility of employing the automatic differentiation tool TAPENADE for this purpose on a large Fortran codebase that is the result of many years of continuous development. As a starting point we will describe the special structure of finite element codes and the implications that this code design carries for an efficient calculation of the Jacobian matrix. We will also propose a first approach towards improving the efficiency of such a method. Finally, we will present a functioning method for the automatic implementation of the Jacobian calculation in a finite element software, but will also point out important shortcomings that will have to be addressed in the future.Comment: 17 pages, 9 figure

Implementation of standard testbeds for numerical relativity

We discuss results that have been obtained from the implementation of the initial round of testbeds for numerical relativity which was proposed in the first paper of the Apples with Apples Alliance. We present benchmark results for various codes which provide templates for analyzing the testbeds and to draw conclusions about various features of the codes. This allows us to sharpen the initial test specifications, design a new test and add theoretical insight.Comment: Corrected versio