Who are you referring to?:Coreference resolution in image narrations

Coreference resolution aims to identify words and phrases which refer to same entity in a text, a core task in natural language processing. In this paper, we extend this task to resolving coreferences in long-form narrations of visual scenes. First we introduce a new dataset with annotated coreference chains and their bounding boxes, as most existing image-text datasets only contain short sentences without coreferring expressions or labeled chains. We propose a new technique that learns to identify coreference chains using weak supervision, only from image-text pairs and a regularization using prior linguistic knowledge. Our model yields large performance gains over several strong baselines in resolving coreferences. We also show that coreference resolution helps improving grounding narratives in images

Improved Coreference Resolution Using Cognitive Insights

Coreference resolution is the task of extracting referential expressions, or mentions, in text and clustering these by the entity or concept they refer to. The sustained research interest in the task reflects the richness of reference expression usage in natural language and the difficulty in encoding insights from linguistic and cognitive theories effectively. In this thesis, we design and implement LIMERIC, a state-of-the-art coreference resolution engine. LIMERIC naturally incorporates both non-local decoding and entity-level modelling to achieve the highly competitive benchmark performance of 64.22% and 59.99% on the CoNLL-2012 benchmark with a simple model and a baseline feature set. As well as strong performance, a key contribution of this work is a reconceptualisation of the coreference task. We draw an analogy between shift-reduce parsing and coreference resolution to develop an algorithm which naturally mimics cognitive models of human discourse processing. In our feature development work, we leverage insights from cognitive theories to improve our modelling. Each contribution achieves statistically significant improvements and sum to gains of 1.65% and 1.66% on the CoNLL-2012 benchmark, yielding performance values of 65.76% and 61.27%. For each novel feature we propose, we contribute an accompanying analysis so as to better understand how cognitive theories apply to real language data. LIMERIC is at once a platform for exploring cognitive insights into coreference and a viable alternative to current systems. We are excited by the promise of incorporating our and further cognitive insights into more complex frameworks since this has the potential to both improve the performance of computational models, as well as our understanding of the mechanisms underpinning human reference resolution

A modular, open-source information extraction framework for identifying clinical concepts and processes of care in clinical narratives

In this thesis, a synthesis is presented of the knowledge models required by clinical informa- tion systems that provide decision support for longitudinal processes of care. Qualitative research techniques and thematic analysis are novelly applied to a systematic review of the literature on the challenges in implementing such systems, leading to the development of an original conceptual framework. The thesis demonstrates how these process-oriented systems make use of a knowledge base derived from workflow models and clinical guidelines, and argues that one of the major barriers to implementation is the need to extract explicit and implicit information from diverse resources in order to construct the knowledge base. Moreover, concepts in both the knowledge base and in the electronic health record (EHR) must be mapped to a common ontological model. However, the majority of clinical guideline information remains in text form, and much of the useful clinical information residing in the EHR resides in the free text fields of progress notes and laboratory reports. In this thesis, it is shown how natural language processing and information extraction techniques provide a means to identify and formalise the knowledge components required by the knowledge base. Original contributions are made in the development of lexico-syntactic patterns and the use of external domain knowledge resources to tackle a variety of information extraction tasks in the clinical domain, such as recognition of clinical concepts, events, temporal relations, term disambiguation and abbreviation expansion. Methods are developed for adapting existing tools and resources in the biomedical domain to the processing of clinical texts, and approaches to improving the scalability of these tools are proposed and evalu- ated. These tools and techniques are then combined in the creation of a novel approach to identifying processes of care in the clinical narrative. It is demonstrated that resolution of coreferential and anaphoric relations as narratively and temporally ordered chains provides a means to extract linked narrative events and processes of care from clinical notes. Coreference performance in discharge summaries and progress notes is largely dependent on correct identification of protagonist chains (patient, clinician, family relation), pronominal resolution, and string matching that takes account of experiencer, temporal, spatial, and anatomical context; whereas for laboratory reports additional, external domain knowledge is required. The types of external knowledge and their effects on system performance are identified and evaluated. Results are compared against existing systems for solving these tasks and are found to improve on them, or to approach the performance of recently reported, state-of-the- art systems. Software artefacts developed in this research have been made available as open-source components within the General Architecture for Text Engineering framework

Towards comprehensive syntactic and semantic annotations of the clinical narrative

Objective: To create annotated clinical narratives with layers of syntactic and semantic labels to facilitate advances in clinical natural language processing (NLP). To develop NLP algorithms and open source components. Methods: Manual annotation of a clinical narrative corpus of 127 606 tokens following the Treebank schema for syntactic information, PropBank schema for predicate-argument structures, and the Unified Medical Language System (UMLS) schema for semantic information. NLP components were developed. Results: The final corpus consists of 13 091 sentences containing 1772 distinct predicate lemmas. Of the 766 newly created PropBank frames, 74 are verbs. There are 28 539 named entity (NE) annotations spread over 15 UMLS semantic groups, one UMLS semantic type, and the Person semantic category. The most frequent annotations belong to the UMLS semantic groups of Procedures (15.71%), Disorders (14.74%), Concepts and Ideas (15.10%), Anatomy (12.80%), Chemicals and Drugs (7.49%), and the UMLS semantic type of Sign or Symptom (12.46%). Inter-annotator agreement results: Treebank (0.926), PropBank (0.891–0.931), NE (0.697–0.750). The part-of-speech tagger, constituency parser, dependency parser, and semantic role labeler are built from the corpus and released open source. A significant limitation uncovered by this project is the need for the NLP community to develop a widely agreed-upon schema for the annotation of clinical concepts and their relations. Conclusions: This project takes a foundational step towards bringing the field of clinical NLP up to par with NLP in the general domain. The corpus creation and NLP components provide a resource for research and application development that would have been previously impossible

SMDDH: Singleton Mention detection using Deep Learning in Hindi Text

Mention detection is an important component of coreference resolution system, where mentions such as name, nominal, and pronominals are identified. These mentions can be purely coreferential mentions or singleton mentions (non-coreferential mentions). Coreferential mentions are those mentions in a text that refer to the same entities in a real world. Whereas, singleton mentions are mentioned only once in the text and do not participate in the coreference as they are not mentioned again in the following text. Filtering of these singleton mentions can substantially improve the performance of a coreference resolution process. This paper proposes a singleton mention detection module based on a fully connected network and a Convolutional neural network for Hindi text. This model utilizes a few hand-crafted features and context information, and word embedding for words. The coreference annotated Hindi dataset comprising of 3.6K sentences, and 78K tokens are used for the task. In terms of Precision, Recall, and F-measure, the experimental findings obtained are excellent

OpenBoek:A Corpus of Literary Coreference and Entities with an Exploration of Historical Spelling Normalization

We present OpenBoek: a corpus of 103k tokens of classic Dutch novels with annotated coreference and entities. The corpus has several properties that are challenging for current coreference models: long documents (fragments of 10k+ words each), domain-specific literary phenomena, and 19th century Dutch spelling. Spelling normalization is added to the corpus as an additional annotation layer, using a data-driven rule-based spelling normalization tool. Normalizations are added using meta-annotation, such that evaluation can be performed with annotations on the original texts without losing token alignment. This tool enables the application of parsing and coreference systems originally developed for modern Dutch. We evaluate parsing and coreference systems on the OpenBoek dataset and find that spelling normalization gives a substantial increase in performance. The OpenBoek corpus is available under an open licens at https://andreasvc.github.io/openboek