Automatic segmentation of abdominal aortic aneurysm from medical images based on active shape models and texture models

A semi-automatic segmentation algorithm for abdominal aortic aneurysms (AAA), and based on Active Shape Models (ASM) and texture models, is presented in this work. The texture information is provided by a set of four 3D magnetic resonance (MR) images, composed of axial slices of the abdomen, where lumen, wall and intraluminal thrombus (ILT) are visible. Due to the reduced number of images in the MRI training set, an ASM and a custom texture model based on border intensity statistics are constructed. For the same reason the shape is characterized from 35-computed tomography angiography (CTA) images set so the shape variations are better represented. For the evaluation, leave-one-out experiments have been held over the four MRI set

AI-based Aortic Vessel Tree Segmentation for Cardiovascular Diseases Treatment:Status Quo

The aortic vessel tree is composed of the aorta and its branching arteries, and plays a key role in supplying the whole body with blood. Aortic diseases, like aneurysms or dissections, can lead to an aortic rupture, whose treatment with open surgery is highly risky. Therefore, patients commonly undergo drug treatment under constant monitoring, which requires regular inspections of the vessels through imaging. The standard imaging modality for diagnosis and monitoring is computed tomography (CT), which can provide a detailed picture of the aorta and its branching vessels if completed with a contrast agent, called CT angiography (CTA). Optimally, the whole aortic vessel tree geometry from consecutive CTAs is overlaid and compared. This allows not only detection of changes in the aorta, but also of its branches, caused by the primary pathology or newly developed. When performed manually, this reconstruction requires slice by slice contouring, which could easily take a whole day for a single aortic vessel tree, and is therefore not feasible in clinical practice. Automatic or semi-automatic vessel tree segmentation algorithms, however, can complete this task in a fraction of the manual execution time and run in parallel to the clinical routine of the clinicians. In this paper, we systematically review computing techniques for the automatic and semi-automatic segmentation of the aortic vessel tree. The review concludes with an in-depth discussion on how close these state-of-the-art approaches are to an application in clinical practice and how active this research field is, taking into account the number of publications, datasets and challenges

Motion Calculations on Stent Grafts in AAA

Endovascular aortic repair (EVAR) is a technique which uses stent grafts to treat aortic aneurysms in patients at risk of aneurysm rupture. Although this technique has been shown to be very successful on the short term, the long term results are less optimistic due to failure of the stent graft. The pulsating blood flow applies stresses and forces to the stent graft, which can cause problems such as breakage, leakage, and migration. Therefore it is of importance to gain more insight into the in vivo motion behavior of these devices. If we know more about the motion patterns in well-behaved stent graft as well as ill-behaving devices, we shall be better able to distinguish between these type of behaviors These insights will enable us to detect stent-related problems and might even be used to predict problems beforehand. Further, these insights will help in designing the next generation stent grafts. Firstly, this work discusses the applicability of ECG-gated CT for measuring the motions of stent grafts in AAA. Secondly, multiple methods to segment the stent graft from these data are discussed. Thirdly, this work proposes a method that uses image registration to apply motion to the segmented stent mode

Prediction of Abdominal Aortic Aneurysm Growth by Automatic Segmentation and Radiomics Feature Quantification

An accurate assessment of abdominal aortic aneurysm (AAA) progression is essential to its clinical management. Currently, the maximum diameter of AAA at diagnosis is considered as the primary indicator of rupture risk. However, it is not optimal as rupture can happen at any size. Several patient-specific factors may also influence AAA rupture risk. Given the clinical variability in aneurysm progression, additional prognostic markers are desirable to enhance patient-specific risk stratification. Radiomics is an image processing technique that extracts quantitative and high-dimensional features from medical images. While it has emerged as a novel approach for solving diagnosis in oncology, its application in cardiovascular diseases is still limited. This study set out with an aim to determine the feasibility of radiomics in identifying AAA with a fast growth rate (>0.3cm/year) using CT images. An automatic AAA segmentation algorithm was developed in our pipeline. Based on the radiomics features of an 84 CT dataset, supervised classification models were implemented with two feature selection algorithms and two classifiers in a machine-learning framework. An AUC of 0.80 was achieved and the predictive power was proved through comparisons to the maximum diameter and conventional risk factors. Further multivariate analysis suggested that a radiomics-based classification model could be used as an independent, yet strong predictor for fast AAA growth rate

DeepVox and SAVE-CT: a contrast- and dose-independent 3D deep learning approach for thoracic aorta segmentation and aneurysm prediction using computed tomography scans

Thoracic aortic aneurysm (TAA) is a fatal disease which potentially leads to dissection or rupture through progressive enlargement of the aorta. It is usually asymptomatic and screening recommendation are limited. The gold-standard evaluation is performed by computed tomography angiography (CTA) and radiologists time-consuming assessment. Scans for other indications could help on this screening, however if acquired without contrast enhancement or with low dose protocol, it can make the clinical evaluation difficult, besides increasing the scans quantity for the radiologists. In this study, it was selected 587 unique CT scans including control and TAA patients, acquired with low and standard dose protocols, with or without contrast enhancement. A novel segmentation model, DeepVox, exhibited dice score coefficients of 0.932 and 0.897 for development and test sets, respectively, with faster training speed in comparison to models reported in the literature. The novel TAA classification model, SAVE-CT, presented accuracies of 0.930 and 0.922 for development and test sets, respectively, using only the binary segmentation mask from DeepVox as input, without hand-engineered features. These two models together are a potential approach for TAA screening, as they can handle variable number of slices as input, handling thoracic and thoracoabdominal sequences, in a fully automated contrast- and dose-independent evaluation. This may assist to decrease TAA mortality and prioritize the evaluation queue of patients for radiologists.Comment: 23 pages, 4 figures, 7 table

Precise Tracking and Initial Segmentation of Abdominal Aortic Aneurysm

[[abstract]]In this paper we propose a mean-shift based technique for a precise tracking and segmentation of abdominal aortic aneurysm (AAA) from computed tomography (CT) angiography images. The proposed method applies median filter on the gradient of ray-length and linear interpolation for denoising. The segmentation result can be used for measurement of aortic shape and dimensions. Knowledge of aortic shape and size is very important for selection of appropriate stent graft device for treatment of AAA. Comparing to conventional approaches, our method is very efficient and can save a lot of manual labors.[[conferencetype]]國際[[conferencedate]]20131102~20131104[[booktype]]電子版[[iscallforpapers]]Y[[conferencelocation]]Aizu-Wakamatsu, Japa

Clinical validation of a software for quantitative follow-up of abdominal aortic aneurysm maximal diameter and growth by CT angiography

Purpose To compare the reproducibility and accuracy of abdominal aortic aneurysm (AAA) maximal diameter (D-max) measurements using segmentation software, with manual measurement on double-oblique MPR as a reference standard. Materials and methods The local Ethics Committee approved this study and waived informed consent. Forty patients (33 men, 7 women; mean age, 72 years, range, 49–86 years) had previously undergone two CT angiography (CTA) studies within 16 ± 8 months for follow-up of AAA ≥35 mm without previous treatment. The 80 studies were segmented twice using the software to calculate reproducibility of automatic D-max calculation on 3D models. Three radiologists reviewed the 80 studies and manually measured D-max on double-oblique MPR projections. Intra-observer and inter-observer reproducibility were calculated by intraclass correlation coefficient (ICC). Systematic errors were evaluated by linear regression and Bland–Altman analyses. Differences in D-max growth were analyzed with a paired Student's t-test. Results The ICC for intra-observer reproducibility of D-max measurement was 0.992 (≥0.987) for the software and 0.985 (≥0.974) and 0.969 (≥0.948) for two radiologists. Inter-observer reproducibility was 0.979 (0.954–0.984) for the three radiologists. Mean absolute difference between semi-automated and manual D-max measurements was estimated at 1.1 ± 0.9 mm and never exceeded 5 mm. Conclusion Semi-automated software measurement of AAA D-max is reproducible, accurate, and requires minimal operator intervention

Design of a comprehensive modeling, characterization, rupture risk assessment and visualization pipeline for Abdominal Aortic Aneurysms

Abdominal aortic aneurysms (AAA) is a dilation of the abdominal aorta, typically within the infra-renal segment of the vessel that cause an expansion of at least 1.5 times the normal vessel diameter. It is becoming a leading cause of death in the United States and around the world, and consequentially, in 2009, the Society for Vascular Surgery (SVS) practice guidelines expressed the critical need to further investigate the factors associated with the risk of AAA rupture, along with potential treatment methods. For decades, the maximum diameter (Dmax) was introduced as the main parameter used to assess AAA behavior and its rupture risk. However, it has been shown that three main categories of parameters including geometrical indices, such as the maximum transverse diameter, biomechanical parameters, such as material properties, and historical clinical parameters, such as age, gender, hereditary history and life-style affect AAA and its rupture risk. Therefore, despite all efforts that have been undertaken to study the relationship among different parameters affecting AAA and its rupture, there are still limitations that require further investigation and modeling; the challenges associated with the traditional, clinical quality images represent one class of these limitations. The other limitation is the use of the homogenous hyper-elastic material property model to study the entire AAA, when, in fact, there is evidence that different degrees of degradation of the elastin and collagen network of the AAA wall lead to different regions of the AAA exhibiting different material properties, which, in turn, affect its biomechanical behavior and rupture. Moreover, the effects of all three main categories of parameters need to be considered simultaneously and collectively when studying the AAAs and their rupture, so once again, the field can further benefit from such studies. Therefore, in this work, we describe a comprehensive pipeline consisting of three main components to overcome some of these existing limitations. The first component of the proposed method focuses on the reconstruction and analysis of both synthetic and human subject-specific 3D models of AAA, accompanied by a full geometric parameter analysis and their effects on wall stress and peak wall stress. The second component investigates the effect of various biomechanical parameters, specifically the use of various homogeneous and heterogeneous material properties to model the behavior of the AAA wall. To this extent, we introduce two different patient-specific regional material property models to better mimic the physiological behavior of the AAA wall. Finally, the third component utilizes machine learning methods to develop a comprehensive predictive model that incorporates the effect of the geometrical, biomechanical and historical clinical data to predict the rupture severity of AAA in a patient-specific manner. This is the first comprehensive semi-automated method developed for the assessment of AAA. Our findings illustrate that using a regional material property model that mimics the realistic heterogeneity of the vessel’s wall leads to more reliable and accurate predictions of AAA severity and associated rupture risk. Additionally, our results indicate that using only Dmax as an indicator for the rupture risk is insufficient, while a combination of parameters from different sources along with PWS could serve as a more reliable rupture assessment. These methods can help better characterize the severity of AAAs, better predict their associated rupture risk, and, in turn, help clinicians with earlier, patient-customized diagnosis and patient-customized treatment planning approaches, such as stent grafting