Cyber-Agricultural Systems for Crop Breeding and Sustainable Production

The Cyber-Agricultural System (CAS) Represents an overarching Framework of Agriculture that Leverages Recent Advances in Ubiquitous Sensing, Artificial Intelligence, Smart Actuators, and Scalable Cyberinfrastructure (CI) in Both Breeding and Production Agriculture. We Discuss the Recent Progress and Perspective of the Three Fundamental Components of CAS – Sensing, Modeling, and Actuation – and the Emerging Concept of Agricultural Digital Twins (DTs). We Also Discuss How Scalable CI is Becoming a Key Enabler of Smart Agriculture. in This Review We Shed Light on the Significance of CAS in Revolutionizing Crop Breeding and Production by Enhancing Efficiency, Productivity, Sustainability, and Resilience to Changing Climate. Finally, We Identify Underexplored and Promising Future Directions for CAS Research and Development

A Data-driven, High-performance and Intelligent CyberInfrastructure to Advance Spatial Sciences

abstract: In the field of Geographic Information Science (GIScience), we have witnessed the unprecedented data deluge brought about by the rapid advancement of high-resolution data observing technologies. For example, with the advancement of Earth Observation (EO) technologies, a massive amount of EO data including remote sensing data and other sensor observation data about earthquake, climate, ocean, hydrology, volcano, glacier, etc., are being collected on a daily basis by a wide range of organizations. In addition to the observation data, human-generated data including microblogs, photos, consumption records, evaluations, unstructured webpages and other Volunteered Geographical Information (VGI) are incessantly generated and shared on the Internet. Meanwhile, the emerging cyberinfrastructure rapidly increases our capacity for handling such massive data with regard to data collection and management, data integration and interoperability, data transmission and visualization, high-performance computing, etc. Cyberinfrastructure (CI) consists of computing systems, data storage systems, advanced instruments and data repositories, visualization environments, and people, all linked together by software and high-performance networks to improve research productivity and enable breakthroughs that are not otherwise possible. The Geospatial CI (GCI, or CyberGIS), as the synthesis of CI and GIScience has inherent advantages in enabling computationally intensive spatial analysis and modeling (SAM) and collaborative geospatial problem solving and decision making. This dissertation is dedicated to addressing several critical issues and improving the performance of existing methodologies and systems in the field of CyberGIS. My dissertation will include three parts: The first part is focused on developing methodologies to help public researchers find appropriate open geo-spatial datasets from millions of records provided by thousands of organizations scattered around the world efficiently and effectively. Machine learning and semantic search methods will be utilized in this research. The second part develops an interoperable and replicable geoprocessing service by synthesizing the high-performance computing (HPC) environment, the core spatial statistic/analysis algorithms from the widely adopted open source python package – Python Spatial Analysis Library (PySAL), and rich datasets acquired from the first research. The third part is dedicated to studying optimization strategies for feature data transmission and visualization. This study is intended for solving the performance issue in large feature data transmission through the Internet and visualization on the client (browser) side. Taken together, the three parts constitute an endeavor towards the methodological improvement and implementation practice of the data-driven, high-performance and intelligent CI to advance spatial sciences.Dissertation/ThesisDoctoral Dissertation Geography 201

Big Data Computing for Geospatial Applications

The convergence of big data and geospatial computing has brought forth challenges and opportunities to Geographic Information Science with regard to geospatial data management, processing, analysis, modeling, and visualization. This book highlights recent advancements in integrating new computing approaches, spatial methods, and data management strategies to tackle geospatial big data challenges and meanwhile demonstrates opportunities for using big data for geospatial applications. Crucial to the advancements highlighted in this book is the integration of computational thinking and spatial thinking and the transformation of abstract ideas and models to concrete data structures and algorithms

Polar Cyclone Identification from 4D Climate Data in a Knowledge-Driven Visualization System

abstract: Arctic cyclone activity has a significant association with Arctic warming and Arctic ice decline. Cyclones in the North Pole are more complex and less developed than those in tropical regions. Identifying polar cyclones proves to be a task of greater complexity. To tackle this challenge, a new method which utilizes pressure level data and velocity field is proposed to improve the identification accuracy. In addition, the dynamic, simulative cyclone visualized with a 4D (four-dimensional) wind field further validated the identification result. A knowledge-driven system is eventually constructed for visualizing and analyzing an atmospheric phenomenon (cyclone) in the North Pole. The cyclone is simulated with WebGL on in a web environment using particle tracing. To achieve interactive frame rates, the graphics processing unit (GPU) is used to accelerate the process of particle advection. It is concluded with the experimental results that: (1) the cyclone identification accuracy of the proposed method is 95.6% when compared with the NCEP/NCAR (National Centers for Environmental Prediction/National Center for Atmospheric Research) reanalysis data; (2) the integrated knowledge-driven visualization system allows for streaming and rendering of millions of particles with an interactive frame rate to support knowledge discovery in the complex climate system of the Arctic region

Earth Observation Open Science and Innovation

geospatial analytics; social observatory; big earth data; open data; citizen science; open innovation; earth system science; crowdsourced geospatial data; citizen science; science in society; data scienc

ODT Flow: Extracting, Analyzing, and Sharing Multi-Source Multi-Scale Human Mobility

In response to the soaring needs of human mobility data, especially during disaster events such as the COVID-19 pandemic, and the associated big data challenges, we develop a scalable online platform for extracting, analyzing, and sharing multi-source multi-scale human mobility flows. Within the platform, an origin-destination-time (ODT) data model is proposed to work with scalable query engines to handle heterogenous mobility data in large volumes with extensive spatial coverage, which allows for efficient extraction, query, and aggregation of billion-level origin-destination (OD) flows in parallel at the server-side. An interactive spatial web portal, ODT Flow Explorer, is developed to allow users to explore multi-source mobility datasets with user-defined spatiotemporal scales. To promote reproducibility and replicability, we further develop ODT Flow REST APIs that provide researchers with the flexibility to access the data programmatically via workflows, codes, and programs. Demonstrations are provided to illustrate the potential of the APIs integrating with scientific workflows and with the Jupyter Notebook environment. We believe the platform coupled with the derived multi-scale mobility data can assist human mobility monitoring and analysis during disaster events such as the ongoing COVID-19 pandemic and benefit both scientific communities and the general public in understanding human mobility dynamics

Automated web-based analysis and visualization of spatiotemporal data

Most data are associated with a place, and many are also associated with a moment in time, a time interval, or another linked temporal component. Spatiotemporal data (i.e., data with elements of both space and time) can be used to assess movement or change over time in a particular location, an approach that is useful across many disciplines. However, spatiotemporal data structures can be quite complex, and the datasets very large. Although GIS software programs are capable of processing and analyzing spatial information, most contain no (or minimal) features for handling temporal information and have limited capability to deal with large, complex multidimensional spatiotemporal data. A related problem is how to best represent spatiotemporal data to support efficient processing, analysis, and visualization. In the era of "big data," efficient methods for analyzing and visualizing large quantities of spatiotemporal data have become increasingly necessary. Automated processing approaches, when made scalable and generalizable, can result in much greater efficiency in spatiotemporal data analysis. The growing popularity of web services and server-side processing methods can be leveraged to create systems for processing spatiotemporal data on the server, with delivery of output products to the client. In many cases, the client can be a standard web browser, providing a common platform from which users can interact with complex server-side processing systems to produce specific output data and visualizations. The rise of complex JavaScript libraries for creating interactive client-side tools has enabled the development of rich internet applications (RIA) that provide interactive data exploration capabilities and an enhanced user experience within the web browser. Three projects involving time-series tsunami simulation data, potential human response in a tsunami evacuation scenario, and large sets of modeled time-series climate grids were conducted to explore automated web-based analysis, processing, and visualization of spatiotemporal data. Methods were developed for efficient handling of spatiotemporal data on the server side, as well as for interactive animation and visualization tools on the client side. The common web browser, particularly when combined with specialized server side code and client side RIA libraries, was found to be an effective platform for analysis and visualization tools that quickly interact with complex spatiotemporal data. Although specialized methods were developed to for each project, in most cases those methods can be generalized to other disciplines or computational domains where similar problem sets exist