Resource discovery in heterogeneous digital content environments

The concept of 'resource discovery' is central to our understanding of how users explore, navigate, locate and retrieve information resources. This submission for a PhD by Published Works examines a series of 11 related works which explore topics pertaining to resource discovery, each demonstrating heterogeneity in their digital discovery context. The assembled works are prefaced by nine chapters which seek to review and critically analyse the contribution of each work, as well as provide contextualization within the wider body of research literature. A series of conceptual sub-themes is used to organize and structure the works and the accompanying critical commentary. The thesis first begins by examining issues in distributed discovery contexts by studying collection level metadata (CLM), its application in 'information landscaping' techniques, and its relationship to the efficacy of federated item-level search tools. This research narrative continues but expands in the later works and commentary to consider the application of Knowledge Organization Systems (KOS), particularly within Semantic Web and machine interface contexts, with investigations of semantically aware terminology services in distributed discovery. The necessary modelling of data structures to support resource discovery - and its associated functionalities within digital libraries and repositories - is then considered within the novel context of technology-supported curriculum design repositories, where questions of human-computer interaction (HCI) are also examined. The final works studied as part of the thesis are those which investigate and evaluate the efficacy of open repositories in exposing knowledge commons to resource discovery via web search agents. Through the analysis of the collected works it is possible to identify a unifying theory of resource discovery, with the proposed concept of (meta)data alignment described and presented with a visual model. This analysis assists in the identification of a number of research topics worthy of further research; but it also highlights an incremental transition by the present author, from using research to inform the development of technologies designed to support or facilitate resource discovery, particularly at a 'meta' level, to the application of specific technologies to address resource discovery issues in a local context. Despite this variation the research narrative has remained focussed on topics surrounding resource discovery in heterogeneous digital content environments and is noted as having generated a coherent body of work. Separate chapters are used to consider the methodological approaches adopted in each work and the contribution made to research knowledge and professional practice.The concept of 'resource discovery' is central to our understanding of how users explore, navigate, locate and retrieve information resources. This submission for a PhD by Published Works examines a series of 11 related works which explore topics pertaining to resource discovery, each demonstrating heterogeneity in their digital discovery context. The assembled works are prefaced by nine chapters which seek to review and critically analyse the contribution of each work, as well as provide contextualization within the wider body of research literature. A series of conceptual sub-themes is used to organize and structure the works and the accompanying critical commentary. The thesis first begins by examining issues in distributed discovery contexts by studying collection level metadata (CLM), its application in 'information landscaping' techniques, and its relationship to the efficacy of federated item-level search tools. This research narrative continues but expands in the later works and commentary to consider the application of Knowledge Organization Systems (KOS), particularly within Semantic Web and machine interface contexts, with investigations of semantically aware terminology services in distributed discovery. The necessary modelling of data structures to support resource discovery - and its associated functionalities within digital libraries and repositories - is then considered within the novel context of technology-supported curriculum design repositories, where questions of human-computer interaction (HCI) are also examined. The final works studied as part of the thesis are those which investigate and evaluate the efficacy of open repositories in exposing knowledge commons to resource discovery via web search agents. Through the analysis of the collected works it is possible to identify a unifying theory of resource discovery, with the proposed concept of (meta)data alignment described and presented with a visual model. This analysis assists in the identification of a number of research topics worthy of further research; but it also highlights an incremental transition by the present author, from using research to inform the development of technologies designed to support or facilitate resource discovery, particularly at a 'meta' level, to the application of specific technologies to address resource discovery issues in a local context. Despite this variation the research narrative has remained focussed on topics surrounding resource discovery in heterogeneous digital content environments and is noted as having generated a coherent body of work. Separate chapters are used to consider the methodological approaches adopted in each work and the contribution made to research knowledge and professional practice

HealthCyberMap: Mapping the Health Cyberspace Using Hypermedia GIS and Clinical Codes

HealthCyberMap () is a Semantic Web service for healthcare professionals and librarians, patients and the public m general that aims at mappmg parts of medical/ health information resources in cyberspace in novel ways to improve their retrieval and navigation. The Semantic Web ( and ) aims to be the next-generation World Wide Web by giving machine-readable semantics and context to the currently presentation-based Web pages. HealthCyberMap features an unconventional use of GIS (Geographic Information Systems) to map conceptual spaces occupied by collections of medical/ health information resources. Besides mapping the semantic and non-geographical aspects of these resources using suitable spatial metaphors, HealthCyberMap also collects and maps the geographical provenance of these resources. Some of HealthCyberMap Web interfaces are visual (maps for browsing resources by clinical/ health topic, by provenance and by type), while others are textual (multilingual interfaces for browsing resources by language, and a directory of topical resource categories, besides HealthCyberMap Semantic Subject Search Engine that goes beyond conventional free-text and keyword-based search engines, and supports synonyms, disease variants, subtypes, as well as some semantic relationships between terms). HealthCyberMap adopts a clinical metadata framework built upon a clinical coding scheme (vocabulary or ontology—ICD-9-CM* clinical classification in the current pilot service). Clinical coding schemes serve as a reliable common backbone for topical resource indexing, automated topical classification, topical visualisation and navigation of coded resource pools (using suitable metaphors), and enhanced information retrieval and linking. A resource metadata base based on Dublin Core metadata set with HealthCyberMap’s own extensions holds information about selected high-quality resources. HealthCyberMap then uses GIS spatialisation methods to generate interactive navigational cybermaps from the metadata base. These visual cybermaps are based on familiar metaphors for image-word association to give users a broad overview and understanding of what is available in this complex conceptual space of medical/ health Internet resources and help them navigate it more efficiently and effectively. HealthCyberMap cybermaps can be considered as semantically-spatialised, ontology-based browsing views of the underlying resource metadata base. Using a clinical coding scheme as a metric for spatialisation (“semantic distance”) is unique to HealthCyberMap and is very much suited for the semantic categorisation and navigation of medical/ health Internet information resources. HealthCyberMap also introduces a useful form of cyberspatial analysis for the detection of topical coverage gaps in its resource pool using choropleth (shaded) maps of human body systems. The project features a cost-effective method for serving Web hypermaps with dynamic metadata base drill-down functionality. It also demonstrates the feasibility of Electronic Patient Record to Online Information Services (like HealthCyberMap) Problem to Knowledge Linking using clinical codes as crisp problem-knowledge linkers or knowledge hooks. The Semantic Subject Search Engine queries the same HealthCyberMap resource metadata base. Explicit concepts in resource metadata map onto a brokering domain ontology (ICD-9-CM) allowing the search engine to infer implicit meanings (synonyms and semantic relationships) not directly mentioned in either the resource or its metadata. Similarly, user queries would map to the same ontology allowing the search engine to infer the implicit semantics of user queries and use them to optimise retrieval. A formative evaluation study of HealthCyberMap pilot service using an online user evaluation questionnaire, in addition to analysis of HealthCyberMap server transaction log, has been conducted during the period from 18 April 2002 to 1 June 2002 with very encouraging results. This two-method evaluation approach was guided by methodologies described in NIH Web Site Evaluation and Performance Measures Toolkit among other resources. Many exciting future possibilities have been also investigated by the author, including the further development of HealthCyberMap as a customisable, location-based medical/ health information service

The evaluation of ontologies: quality, reuse and social factors

Finding a “good” or the “right” ontology is a growing challenge in the ontology domain, where one of the main aims is to share and reuse existing semantics and knowledge. Before reusing an ontology, knowledge engineers not only have to find a set of appropriate ontologies for their search query, but they should also be able to evaluate those ontologies according to different internal and external criteria. Therefore, ontology evaluation is at the heart of ontology selection and has received a considerable amount of attention in the literature.Despite the importance of ontology evaluation and selection and the widespread research on these topics, there are still many unanswered questions and challenges when it comes to evaluating and selecting ontologies for reuse. Most of the evaluation metrics and frameworks in the literature are mainly based on a limited set of internal characteristics, e.g., content and structure of ontologies and ignore how they are used and evaluated by communities. This thesis aimed to investigate the notion of quality and reusability in the ontology domain and to explore and identify the set of metrics that can affect the process of ontology evaluation and selection for reuse. [Continues.

Efficient Decision Support Systems

This series is directed to diverse managerial professionals who are leading the transformation of individual domains by using expert information and domain knowledge to drive decision support systems (DSSs). The series offers a broad range of subjects addressed in specific areas such as health care, business management, banking, agriculture, environmental improvement, natural resource and spatial management, aviation administration, and hybrid applications of information technology aimed to interdisciplinary issues. This book series is composed of three volumes: Volume 1 consists of general concepts and methodology of DSSs; Volume 2 consists of applications of DSSs in the biomedical domain; Volume 3 consists of hybrid applications of DSSs in multidisciplinary domains. The book is shaped decision support strategies in the new infrastructure that assists the readers in full use of the creative technology to manipulate input data and to transform information into useful decisions for decision makers

A User-Centered Approach to the Development of a History Domain Ontology: Helping Teachers Use Digital Primary Sources

The use of primary source materials is recognized as key to supporting inquiry-based history and social studies education. The extensive digitization of library, museum, and other cultural heritage collections represents an important resource for teachers as they strive to develop their students. critical thinking skills. Yet, searching and selecting digital primary sources appropriate for classroom use can be difficult and time-consuming. This study investigates the design requirements and the potential usefulness of a domain-specific ontology to facilitate access to, and use of, a collection of digital primary source materials developed by the University Library of the University of North Carolina at Chapel Hill (UNC-CH). During a three-phase study an ontology model was designed and evaluated with the involvement of social studies teachers identified as the primary community of end users. The findings revealed that the design of the ontology was appropriate to support the information needs of the teachers and was perceived as a potentially useful tool to enhance access and facilitate inquiry-based instruction. The primary contribution of this dissertation is the introduction of an approach to ontology development that is user-centered and designed to facilitate access to digital cultural heritage materials. This study also contributes to the growing body of literature on teachers. use of digital libraries and primary source materials, especially in the area of social studies education

The characteristics of successful evidence retrieval by nephrologists and the impact of PubMed search filters

Background: Clinicians frequently search PubMed to guide patient care. This study investigated the factors that impact successful searching and the utility of PubMed search filters. Methods: A random sample of nephrologists was surveyed between 2008 and 2010; 160 valid responses were received (72% response rate). One group of 60 respondents was presented with the same two clinical questions, while the other 100 were each presented with a unique clinical question. The clinical questions were based on recently published systematic reviews. Respondents provided the search terms they would type into PubMed to address their clinical question(s). All physician-provided searches were executed in PubMed and outcome measures of sensitivity (proportion of relevant articles found) and precision (proportion of all articles found that are relevant) were calculated. Primary studies included in the reviews served as the reference standards of relevant articles. For the first group of respondents, the associations between the search query or nephrologist characteristics and search outcomes were investigated through multivariable regression modeling. For the second group, three types of filters were applied to the physician-provided searches: one designed to identify high quality studies about treatment (‘methods’), one designed to identify studies with renal content (‘content’) and one designed to limit searches to journals that publish renal evidence (‘journal’). Search outcomes of the non-filtered and filter-aided searches were compared using the Wilcoxon Signed-Rank test. Results: Multifaceted searching (e.g. using MeSH, limits) improved sensitivity (rate ratio[RR]:2.6; 95% CI:1.4-5.0) and precision (RR:2.0; 95% CI:1.3-3.3). The addition of concept terms decreased sensitivity (RR:0.7; 95% CI:0.5-0.9), while increasing precision (RR:1.6; 95% CI:1.3-2.0). No associations were evident between nephrologist characteristics and sensitivity. However, physicians who previously received training in literature searching produced searches with better precision (RR:2.3; 95% CI:1.4-3.6). The combined use of the ‘methods’ and ‘content’ filters produced the largest improvement in precision with no change in sensitivity, compared to non-filtered searches (median difference:5.5%; 95% CI:2%-12%). Conclusions: Use of multifaceted searching and filters can improve physician-provided searches in PubMed. Literature training curricula should adopt the findings from this study. Improved search performance has the potential to enhance clinical practice and improve patient care

Technologies for a FAIRer use of Ocean Best Practices

The publication and dissemination of best practices in ocean observing is pivotal for multiple aspects of modern marine science, including cross-disciplinary interoperability, improved reproducibility of observations and analyses, and training of new practitioners. Often, best practices are not published in a scientific journal and may not even be formally documented, residing solely within the minds of individuals who pass the information along through direct instruction. Naturally, documenting best practices is essential to accelerate high-quality marine science; however, documentation in a drawer has little impact. To enhance the application and development of best practices, we must leverage contemporary document handling technologies to make best practices discoverable, accessible, and interlinked, echoing the logic of the FAIR data principles [1]

Special Libraries, Winter 1989

Volume 80, Issue 1https://scholarworks.sjsu.edu/sla_sl_1989/1000/thumbnail.jp