Enhancing the Jaquez k Nearest Neighbor Test for Space-Time Interaction

The Jacquez k nearest neighbor test, originally developed to improve upon shortcomings of existing tests for space-time interaction, has been shown to be a robust and powerful method of detecting interaction. Despite its flexibility and power however, the test has three main shortcomings: (1) it discards important information regarding the spatial and temporal scale at which detected interac- tion takes place; (2) the results of the test have not been visualized; (3) recent research demonstrates the test to be susceptible to population shift bias. This study presents enhancements to the Jacquez k nearest neighbors test with the goal of addressing each of these three shortcomings and improving the utility of the test. Data on Burkitt’s lymphoma cases in Uganda between 1961-1975 are employed to illustrate the modifications and enhance the visual output of the test. Output from the enhanced test is compared to that provided by alternative tests of space-time interaction. Results show the enhancements presented in this study transform the Jacquez test into a complete, descriptive, and informative metric that can be used as a stand alone measure of global space-time interaction.space-time interaction, Jacquez k nearest neighbor, visualization, space-time cube, population shift bias

Spatial scales of interactions among bacteria and between bacteria and the leaf surface.

Microbial life on plant leaves is characterized by a multitude of interactions between leaf colonizers and their environment. While the existence of many of these interactions has been confirmed, their spatial scale or reach often remained unknown. In this study, we applied spatial point pattern analysis to 244 distribution patterns of Pantoea agglomerans and Pseudomonas syringae on bean leaves. The results showed that bacterial colonizers of leaves interact with their environment at different spatial scales. Interactions among bacteria were often confined to small spatial scales up to 5-20 μm, compared to interactions between bacteria and leaf surface structures such as trichomes which could be observed in excess of 100 μm. Spatial point-pattern analyses prove a comprehensive tool to determine the different spatial scales of bacterial interactions on plant leaves and will help microbiologists to better understand the interplay between these interactions

Survey on geographic visual display techniques in epidemiology: Taxonomy and characterization

Many works have been done on the topic of Geographic Visual Display with different objectives and approaches. There are studies to compare the traditional cartography techniques (the traditional term of Geographic Visual Display (GVD) without Human-Computer Interaction (HCI)) to Modern GIS which are also known as Geo-visualization, some literature differentiates and highlight the commonalities of features and architectures of different Geographic Visual Display tools (from layers and clusters to dot and color and more). Furthermore, with the existence of more advanced tools which support data exploration, few tasks are done to evaluate how those tools are used to handle complex and multivariate spatial-temporal data. Several test on usability and interactivity of tools toward user's needs or preferences, some even develop frameworks that address user's concern in a wide array of tasks, and others prove how these tools are able to stimulate the visual thought process and help in decision making or event prediction amongst decision-makers. This paper surveyed and categorized these research articles into 2 categories: Traditional Cartography (TC) and Geo-visualization (G). This paper will classify each category by their techniques and tasks that contribute to the significance of data representation in Geographic Visual Display and develop perspectives of each area and evaluating trends of Geographic Visual Display Techniques. Suggestions and ideas on what mechanisms can be used to improve and diversify Geographic Visual Display Techniques are provided at the end of this survey

GI Systems for public health with an ontology based approach

Dissertation submitted in partial fulfillment of the requirements for the Degree of Master of Science in Geospatial Technologies.Health is an indispensable attribute of human life. In modern age, utilizing technologies for health is one of the emergent concepts in several applied fields. Computer science, (geographic) information systems are some of the interdisciplinary fields which motivates this thesis. Inspiring idea of the study is originated from a rhetorical disease DbHd: Database Hugging Disorder, defined by Hans Rosling at World Bank Open Data speech in May 2010. The cure of this disease can be offered as linked open data, which contains ontologies for health science, diseases, genes, drugs, GEO species etc. LOD-Linked Open Data provides the systematic application of information by publishing and connecting structured data on the Web. In the context of this study we aimed to reduce boundaries between semantic web and geo web. For this reason a use case data is studied from Valencia CSISP- Research Center of Public Health in which the mortality rates for particular diseases are represented spatio-temporally. Use case data is divided into three conceptual domains (health, spatial, statistical), enhanced with semantic relations and descriptions by following Linked Data Principles. Finally in order to convey complex health-related information, we offer an infrastructure integrating geo web and semantic web. Based on the established outcome, user access methods are introduced and future researches/studies are outlined

An OLAP-GIS System for Numerical-Spatial Problem Solving in Community Health Assessment Analysis

Community health assessment (CHA) professionals who use information technology need a complete system that is capable of supporting numerical-spatial problem solving. On-Line Analytical Processing (OLAP) is a multidimensional data warehouse technique that is commonly used as a decision support system in standard industry. Coupling OLAP with Geospatial Information System (GIS) offers the potential for a very powerful system. For this work, OLAP and GIS were combined to develop the Spatial OLAP Visualization and Analysis Tool (SOVAT) for numerical-spatial problem solving. In addition to the development of this system, this dissertation describes three studies in relation to this work: a usability study, a CHA survey, and a summative evaluation.The purpose of the usability study was to identify human-computer interaction issues. Fifteen participants took part in the study. Three participants per round used the system to complete typical numerical-spatial tasks. Objective and subjective results were analyzed after each round and system modifications were implemented. The result of this study was a novel OLAP-GIS system streamlined for the purposes of numerical-spatial problem solving.The online CHA survey aimed to identify the information technology currently used for numerical-spatial problem solving. The survey was sent to CHA professionals and allowed for them to record the individual technologies they used during specific steps of a numerical-spatial routine. In total, 27 participants completed the survey. Results favored SPSS for numerical-related steps and GIS for spatial-related steps.Next, a summative within-subjects crossover design compared SOVAT to the combined use of SPSS and GIS (termed SPSS-GIS) for numerical-spatial problem solving. Twelve individuals from the health sciences at the University of Pittsburgh participated. Half were randomly selected to use SOVAT first, while the other half used SPSS-GIS first. In the second session, they used the alternate application. Objective and subjective results favored SOVAT over SPSS-GIS. Inferential statistics were analyzed using linear mixed model analysis. At the .01 level, SOVAT was statistically significant from SPSS-GIS for satisfaction and time (p < .002).The results demonstrate the potential for OLAP-GIS in CHA analysis. Future work will explore the impact of an OLAP-GIS system in other areas of public health

Comparative ergonomic workflow and user experience analysis of MRI versus fluoroscopy-guided vascular interventions:an iliac angioplasty exemplar case study

Purpose A methodological framework is introduced to assess and compare a conventional fluoroscopy protocol for peripheral angioplasty with a new magnetic resonant imaging (MRI)-guided protocol. Different scenarios were considered during interventions on a perfused arterial phantom with regard to time-based and cognitive task analysis, user experience and ergonomics. Methods Three clinicians with different expertise performed a total of 43 simulated common iliac angioplasties (9 fluoroscopic, 34 MRI-guided) in two blocks of sessions. Six different configurations for MRI guidance were tested in the first block. Four of them were evaluated in the second block and compared to the fluoroscopy protocol. Relevant stages’ durations were collected, and interventions were audio-visually recorded from different perspectives. A cued retrospective protocol analysis (CRPA) was undertaken, including personal interviews. In addition, ergonomic constraints in the MRI suite were evaluated. Results Significant differences were found when comparing the performance between MRI configurations versus fluoroscopy. Two configurations [with times of 8.56 (0.64) and 9.48 (1.13) min] led to reduce procedure time for MRI guidance, comparable to fluoroscopy [8.49 (0.75) min]. The CRPA pointed out the main influential factors for clinical procedure performance. The ergonomic analysis quantified musculoskeletal risks for interventional radiologists when utilising MRI. Several alternatives were suggested to prevent potential low-back injuries. Conclusions This work presents a step towards the implementation of efficient operational protocols for MRI-guided procedures based on an integral and multidisciplinary framework, applicable to the assessment of current vascular protocols. The use of first-user perspective raises the possibility of establishing new forms of clinical training and education

A geographical information system model to define COVID-19 problem areas with an analysis in the socio-economic context at the regional scale in the North of Spain

ABSTRACT: The work presented concerns the spatial behaviour of coronavirus disease 2019 (COVID-19) at the regional scale and the socio-economic context of problem areas over the 2020-2021 period. We propose a replicable geographical information systems (GIS) methodology based on geocodification and analysis of COVID-19 microdata registered by health authorities of the Government of Cantabria, Spain from the beginning of the pandemic register (29th February 2020) to 2nd December 2021. The spatial behaviour of the virus was studied using ArcGIS Pro and a 1x1 km vector grid as the homogeneous reference layer. The GIS analysis of 45,392 geocoded cases revealed a clear process of spatial contraction of the virus after the spread in 2020 with 432 km2 of problem areas reduced to 126.72 km2 in 2021. The socio-economic framework showed complex relationships between COVID-19 cases and the explanatory variables related to household characteristics, socio-economic conditions and demographic structure. Local bivariate analysis showed fuzzier results in persistent hotspots in urban and peri-urban areas. Questions about ?where, when and how? contribute to learning from experience as we must draw inspiration from, and explore connections to, those confronting the issues related to the current pandemic

Geographical Research in the Digital Humanities: Spatial Concepts, Approaches and Methods

The richness of social and cultural theory in the humanities offers countless opportunities for using theory-informed concepts in data-based analysis workflows. The contributors to this volume thus encourage further research utilizing out-of-the-box models and approaches to space and place in the field of Digital Humanities. The collection follows the two complementary goals of providing promising conceptualisations of space and place for a broad audience from Digital Humanities, and of presenting current work in Digital Humanities using different conceptualisations of space and place or offering innovative methods for their analysis