A REST Model for High Throughput Scheduling in Computational Grids

Current grid computing architectures have been based on cluster management and batch queuing systems, extended to a distributed, federated domain. These have shown shortcomings in terms of scalability, stability, and modularity. To address these problems, this dissertation applies architectural styles from the Internet and Web to the domain of generic computational grids. Using the REST style, a flexible model for grid resource interaction is developed which removes the need for any centralised services or specific protocols, thereby allowing a range of implementations and layering of further functionality. The context for resource interaction is a generalisation and formalisation of the Condor ClassAd match-making mechanism. This set theoretic model is described in depth, including the advantages and features which it realises. This RESTful style is also motivated by operational experience with existing grid infrastructures, and the design, operation, and performance of a proto-RESTful grid middleware package named DIRAC. This package was designed to provide for the LHCb particle physics experiment's âﾜoff-lineâ computational infrastructure, and was first exercised during a 6 month data challenge which utilised over 670 years of CPU time and produced 98 TB of data through 300,000 tasks executed at computing centres around the world. The design of DIRAC and performance measures from the data challenge are reported. The main contribution of this work is the development of a REST model for grid resource interaction. In particular, it allows resource templating for scheduling queues which provide a novel distributed and scalable approach to resource scheduling on the grid

Distributed data mining in grid computing environments

The official published version of this article can be found at the link below.The computing-intensive data mining for inherently Internet-wide distributed data, referred to as Distributed Data Mining (DDM), calls for the support of a powerful Grid with an effective scheduling framework. DDM often shares the computing paradigm of local processing and global synthesizing. It involves every phase of Data Mining (DM) processes, which makes the workflow of DDM very complex and can be modelled only by a Directed Acyclic Graph (DAG) with multiple data entries. Motivated by the need for a practical solution of the Grid scheduling problem for the DDM workflow, this paper proposes a novel two-phase scheduling framework, including External Scheduling and Internal Scheduling, on a two-level Grid architecture (InterGrid, IntraGrid). Currently a DM IntraGrid, named DMGCE (Data Mining Grid Computing Environment), has been developed with a dynamic scheduling framework for competitive DAGs in a heterogeneous computing environment. This system is implemented in an established Multi-Agent System (MAS) environment, in which the reuse of existing DM algorithms is achieved by encapsulating them into agents. Practical classification problems from oil well logging analysis are used to measure the system performance. The detailed experiment procedure and result analysis are also discussed in this paper

Towards Loosely-Coupled Programming on Petascale Systems

We have extended the Falkon lightweight task execution framework to make loosely coupled programming on petascale systems a practical and useful programming model. This work studies and measures the performance factors involved in applying this approach to enable the use of petascale systems by a broader user community, and with greater ease. Our work enables the execution of highly parallel computations composed of loosely coupled serial jobs with no modifications to the respective applications. This approach allows a new-and potentially far larger-class of applications to leverage petascale systems, such as the IBM Blue Gene/P supercomputer. We present the challenges of I/O performance encountered in making this model practical, and show results using both microbenchmarks and real applications from two domains: economic energy modeling and molecular dynamics. Our benchmarks show that we can scale up to 160K processor-cores with high efficiency, and can achieve sustained execution rates of thousands of tasks per second.Comment: IEEE/ACM International Conference for High Performance Computing, Networking, Storage and Analysis (SuperComputing/SC) 200

Libra: An Economy driven Job Scheduling System for Clusters

Clusters of computers have emerged as mainstream parallel and distributed platforms for high-performance, high-throughput and high-availability computing. To enable effective resource management on clusters, numerous cluster managements systems and schedulers have been designed. However, their focus has essentially been on maximizing CPU performance, but not on improving the value of utility delivered to the user and quality of services. This paper presents a new computational economy driven scheduling system called Libra, which has been designed to support allocation of resources based on the users? quality of service (QoS) requirements. It is intended to work as an add-on to the existing queuing and resource management system. The first version has been implemented as a plugin scheduler to the PBS (Portable Batch System) system. The scheduler offers market-based economy driven service for managing batch jobs on clusters by scheduling CPU time according to user utility as determined by their budget and deadline rather than system performance considerations. The Libra scheduler ensures that both these constraints are met within an O(n) run-time. The Libra scheduler has been simulated using the GridSim toolkit to carry out a detailed performance analysis. Results show that the deadline and budget based proportional resource allocation strategy improves the utility of the system and user satisfaction as compared to system-centric scheduling strategies.Comment: 13 page

Many-Task Computing and Blue Waters

This report discusses many-task computing (MTC) generically and in the context of the proposed Blue Waters systems, which is planned to be the largest NSF-funded supercomputer when it begins production use in 2012. The aim of this report is to inform the BW project about MTC, including understanding aspects of MTC applications that can be used to characterize the domain and understanding the implications of these aspects to middleware and policies. Many MTC applications do not neatly fit the stereotypes of high-performance computing (HPC) or high-throughput computing (HTC) applications. Like HTC applications, by definition MTC applications are structured as graphs of discrete tasks, with explicit input and output dependencies forming the graph edges. However, MTC applications have significant features that distinguish them from typical HTC applications. In particular, different engineering constraints for hardware and software must be met in order to support these applications. HTC applications have traditionally run on platforms such as grids and clusters, through either workflow systems or parallel programming systems. MTC applications, in contrast, will often demand a short time to solution, may be communication intensive or data intensive, and may comprise very short tasks. Therefore, hardware and software for MTC must be engineered to support the additional communication and I/O and must minimize task dispatch overheads. The hardware of large-scale HPC systems, with its high degree of parallelism and support for intensive communication, is well suited for MTC applications. However, HPC systems often lack a dynamic resource-provisioning feature, are not ideal for task communication via the file system, and have an I/O system that is not optimized for MTC-style applications. Hence, additional software support is likely to be required to gain full benefit from the HPC hardware

A hyper-heuristic for adaptive scheduling in computational grids

In this paper we present the design and implementation of an hyper-heuristic for efficiently scheduling independent jobs in computational grids. An efficient scheduling of jobs to grid resources depends on many parameters, among others, the characteristics of the resources and jobs (such as computing capacity, consistency of computing, workload, etc.). Moreover, these characteristics change over time due to the dynamic nature of grid environment, therefore the planning of jobs to resources should be adaptively done. Existing ad hoc scheduling methods (batch and immediate mode) have shown their efficacy for certain types of resource and job characteristics. However, as stand alone methods, they are not able to produce the best planning of jobs to resources for different types of Grid resources and job characteristics. In this work we have designed and implemented a hyper-heuristic that uses a set of ad hoc (immediate and batch mode) scheduling methods to provide the scheduling of jobs to Grid resources according to the Grid and job characteristics. The hyper-heuristic is a high level algorithm, which examines the state and characteristics of the Grid system (jobs and resources), and selects and applies the ad hoc method that yields the best planning of jobs. The resulting hyper-heuristic based scheduler can be thus used to develop network-aware applications that need efficient planning of jobs to resources. The hyper-heuristic has been tested and evaluated in a dynamic setting through a prototype of a Grid simulator. The experimental evaluation showed the usefulness of the hyper-heuristic for planning of jobs to resources as compared to planning without knowledge of the resource and job characteristics.Peer ReviewedPostprint (author's final draft

Bulk Scheduling with the DIANA Scheduler

Results from the research and development of a Data Intensive and Network Aware (DIANA) scheduling engine, to be used primarily for data intensive sciences such as physics analysis, are described. In Grid analyses, tasks can involve thousands of computing, data handling, and network resources. The central problem in the scheduling of these resources is the coordinated management of computation and data at multiple locations and not just data replication or movement. However, this can prove to be a rather costly operation and efficient sing can be a challenge if compute and data resources are mapped without considering network costs. We have implemented an adaptive algorithm within the so-called DIANA Scheduler which takes into account data location and size, network performance and computation capability in order to enable efficient global scheduling. DIANA is a performance-aware and economy-guided Meta Scheduler. It iteratively allocates each job to the site that is most likely to produce the best performance as well as optimizing the global queue for any remaining jobs. Therefore it is equally suitable whether a single job is being submitted or bulk scheduling is being performed. Results indicate that considerable performance improvements can be gained by adopting the DIANA scheduling approach.Comment: 12 pages, 11 figures. To be published in the IEEE Transactions in Nuclear Science, IEEE Press. 200