108 research outputs found

    One-sided transparency : a revolution in visualization.

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    Colorectal cancer is one of the leading causes of death in the world. Colonoscopy, the traditional procedure for detecting colorectal cancer, is very effective. It does have downsides, however - it is invasive, uncomfortable for the patient, and not available to some patients with certain conditions. Virtual colonoscopy has been developed in order to address these issues. A virtual colonoscopy (VC) is a non-invasive method for performing a colonoscopy by using medical imaging data to create a virtual representation of the colon. Previous virtual colonoscopy methods include fly-through, fly-over, flattening, and the unfolded cube method. Fly-through moves the camera through the inside of the colon, following a centerline from the length of the colon. Fly-over splits the colon into halves longitudinally, and flies a camera over each half. Flattening reduces the 3D colon model to a 2D image. The unfolded cube method flies a set of cameras along the centerline as in flythrough, but where flythrough had one camera looking along the centerline, the unfolded cube method presents views from six cameras. The six camera views are positioned in the pattern of an unfolded cube, which gives rise to the method’s name. This thesis will present a new method called one-sided transparency (OST). This is a method for visualizing virtual objects so that the interior surfaces can be viewed from the outside. OST has numerous improvements over existing VC methods, particularly when combined with fly-over methods. However, this thesis will also demonstrate that OST is not limited to fly-over nor even to VC, as it has applications in multiple fields. For quantitative evaluation, this thesis focused on comparing specific scenarios that OST excels in visualizing. Fly-through navigation has difficulties with polyps between haustral folds, and prior fly-over work had visual artifacts that degraded the quality of the final visualization. These and other specific cases are visualized using OST in order to highlight the power of this new technique. Additionally, the previous FO method had some significant drawbacks that are solved by the application of OST. These problems and their origins will be addressed, along with the way that OST solves them. This thesis will also explore potential applications for OST outside of VC. This will include a more general visualization of tubular objects. It will be shown that OST has the ability to highlight structural issues and deformities such as cracks and bumps. This has potential applications in medical fields outside of VC as well as in structural engineering. This will demonstrate OST’s usefulness as a general technique, even outside the context of VC. Finally, this thesis will present results regarding OST for VC. It will show that OST presents several advantages over previous VC methods. OST allows easier viewing of polyps in difficult locations and offers a more complete view of the colon. OST has a number of advantages over the existing fly-over method, including faster time-to-viewing, less sensitivity to centerline error, and improved accuracy in the separation of halves

    Optimizing endoscopic strategies for colorectal cancer screening : improving colonoscopy effectiveness by optical, non-optical, and computer-based models

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    Introduction: Le cancer colorectal demeure un grave problème de santé publique au Canada. Les programmes de dépistage pourraient réduire l'incidence du cancer colorectal et la mortalité qui lui est associée. Une coloscopie de haute qualité est considérée comme un moyen rentable de prévenir le cancer en identifiant et en éliminant les lésions précurseurs du cancer. Bien que la coloscopie puisse servir de mesure préventive contre le cancer, la procédure peut imposer un fardeau supplémentaire à la santé publique par l'enlèvement et l'évaluation histologique de polypes colorectaux diminutifs et insignifiants, qui présentent un risque minime d'histologie avancée ou de cancer. La technologie de l'amélioration de l'image permettrait aux médecins de réséquer et de rejeter les polypes diminutifs ou de diagnostiquer et de laisser les polypes rectosigmoïdiens diminutifs sans examen histopathologique. Malgré la disponibilité de systèmes informatiques de caractérisation des polypes, la pratique du diagnostic optique reste limitée en raison de la crainte d'un mauvais diagnostic de cancer, d'une mauvaise surveillance des patients et des problèmes médico-légaux correspondants. Il est donc indispensable d'élaborer des stratégies alternatives de résection et d'élimination non optiques pour améliorer la précision et la sécurité du diagnostic optique et l'adapter à la pratique clinique. Ces stratégies doivent répondre à des critères cliniques simples et ne nécessitent pas de formation supplémentaire ni de dispositifs d'amélioration de l'image. De plus, la pratique sûre du diagnostic optique, la prise de décision appropriée concernant la technique de polypectomie ou l'intervalle de surveillance dépendent de l'estimation précise de la taille des polypes. La variabilité inter-endoscopistes dans la mesure de la taille des polypes exige le développement de méthodes fiables et validées pour augmenter la précision de la mesure de la taille. Une balance virtuelle intégrée à un endoscope haute définition est actuellement disponible pour le calcul automatique de la taille des polypes, mais sa faisabilité clinique n'a pas encore été établie. En dehors des points susmentionnés, une coloscopie de haute qualité nécessite l'examen complet de la muqueuse colique, ainsi que la visualisation de la valve iléocæcale et de l'orifice appendiculaire. À ce jour, aucune solution informatique n'a été capable d'assister les endoscopistes pendant les coloscopies en temps réel en détectant et en différenciant les points de repère cæcaux de façon automatique. Objectifs: Les objectifs de cette thèse sont : 1) d'étudier l'effet de la limitation du diagnostic optique aux polypes de 1 à 3 mm sur la sécurité du diagnostic optique pour le traitement des polypes diminutifs et l'acceptation par les endoscopistes de son utilisation dans les pratiques en temps réel tout en préservant ses potentiels de temps et de rentabilité ; 2) élaborer et examiner des stratégies non optiques de résection et d'élimination qui peuvent remplacer le diagnostic optique tout en offrant les mêmes possibilités d'économie de temps et d'argent ; 3) examiner la précision relative d'un endoscope à échelle virtuelle pour mesurer la taille des polypes ; 4) former, valider et tester un modèle d'intelligence artificielle qui peut prédire la complétude d'une procédure de coloscopie en identifiant les points de repère anatomiques du cæcum (c'est-à-dire la valve iléo-cæcale et l'orifice appendiculaire) et en les différenciant les uns des autres, des polypes et de la muqueuse normale. Méthodes: Pour atteindre le premier objectif de cette thèse, une analyse post-hoc de trois études prospectives a été réalisée pour évaluer la proportion de patients chez lesquels des adénomes avancés ont été découverts et le diagnostic optique a entraîné une surveillance retardée dans trois groupes de taille de polypes : 1–3, 1–5, et 1–10 mm. Pour atteindre le second objectif de cette thèse, deux stratégies non optiques ont été développées et testées dans deux études prospectives: une stratégie de résection et d'élimination basée sur la localisation qui utilise la localisation anatomique des polypes pour classer les polypes du côlon en non-néoplasiques ou néoplasiques à faible risque et une stratégie de résection et d'élimination basée sur les polypes qui attribue des intervalles de surveillance en fonction du nombre et de la taille des polypes. Dans les trois études, la concordance de l'attribution d'intervalles de surveillance basée sur un diagnostic optique à haute confiance ou sur des stratégies non optiques avec les recommandations basées sur la pathologie, ainsi que la proportion d'examens pathologiques évités et la proportion de communications immédiates d'intervalles de surveillance, ont été évaluées. Le troisième objectif de cette thèse a été abordé par le biais d'une étude de faisabilité pilote prospective qui a utilisé la mesure de spécimens de polypes immédiatement après leur prélèvement, suite à une polypectomie par un pied à coulisse Vernier comme référence pour comparer la précision relative des mesures de la taille des polypes entre les endoscopistes et un endoscope à échelle virtuelle. Enfin, le quatrième objectif de cette thèse a été évalué par l'enregistrement et l'annotation prospective de vidéos de coloscopie. Des images non modifiées de polype, de valve iléo-caecale, d'orifice appendiculaire et de muqueuse normale ont été extraites et utilisées pour développer et tester un modèle de réseau neuronal convolutionnel profond pour classer les images pour les points de repère qu'elles contiennent. Résultats: La réduction du seuil du diagnostic optique favoriserait la sécurité du diagnostic optique en diminuant de manière significative le risque d'écarter un polype avec une histologie avancée ou la mauvaise surveillance d'un patient avec de tels polypes. En outre, les stratégies non optiques de résection et d'élimination pourraient dépasser le critère de référence d'au moins 90% de concordance dans l'attribution des intervalles de surveillance post-polypectomie par rapport aux décisions basées sur l'évaluation pathologique. De plus, il a été démontré que l'endoscope à échelle virtuelle est plus précis que l'estimation visuelle de la taille des polypes en temps réel. Enfin, un modèle d'apprentissage profond s'est révélé très efficace pour détecter les repères cæcaux, les polypes et la muqueuse normale, à la fois individuellement et en combinaison. Discussion: La prédiction histologique optique des polypes de 1 à 3 mm est une approche efficace pour améliorer la sécurité et la faisabilité de la stratégie de résection et d'écartement dans la pratique. Les approches non optiques de résection et d'élimination offrent également des alternatives viables au diagnostic optique lorsque les endoscopistes ne sont pas en mesure de répondre aux conditions de mise en œuvre systématique du diagnostic optique, ou lorsque la technologie d'amélioration de l'image n'est pas accessible. Les stratégies de résection et de rejet, qu'elles soient optiques ou non, pourraient réduire les coûts supplémentaires liés aux examens histopathologiques et faciliter la communication du prochain intervalle de surveillance le même jour que la coloscopie de référence. Un endoscope virtuel à échelle réduite faciliterait l'utilisation du diagnostic optique pour la détection des polypes diminutifs et permet une prise de décision appropriée pendant et après la coloscopie. Enfin, le modèle d'apprentissage profond peut être utile pour promouvoir et contrôler la qualité des coloscopies par la prédiction d'une coloscopie complète. Cette technologie peut être intégrée dans le cadre d'une plateforme de vérification et de génération de rapports qui élimine le besoin d'intervention humaine. Conclusion: Les résultats présentés dans cette thèse contribueront à l'état actuel des connaissances dans la pratique de la coloscopie concernant les stratégies pour améliorer l'efficacité de la coloscopie dans la prévention du cancer colorectal. Cette étude fournira des indications précieuses pour les futurs chercheurs intéressés par le développement de méthodes efficaces de traitement des polypes colorectaux diminutifs. Le diagnostic optique nécessite une formation complémentaire et une mise en œuvre à l'aide de modules de caractérisation informatisés. En outre, malgré la lenteur de l'adoption des solutions informatiques dans la pratique clinique, la coloscopie assistée par l'IA ouvrira la voie à la détection automatique, à la caractérisation et à la rédaction semi-automatique des rapports de procédure.Introduction: Colorectal cancer remains a critical public health concern in Canada. Screening programs could reduce the incidence of colorectal cancer and its associated mortality. A high-quality colonoscopy is appraised to be a cost-effective means of cancer prevention through identifying and removing cancer precursor lesions. Although colonoscopy can serve as a preventative measure against cancer, the procedure can impose an additional burden on the public health by removing and histologically evaluating insignificant diminutive colorectal polyps, which pose a minimal risk of advanced histology or cancer. The image-enhance technology would enable physicians to resect and discard diminutive polyps or diagnose and leave diminutive rectosigmoid polyps without histopathology examination. Despite the availability of computer-based polyp characterization systems, the practice of optical diagnosis remains limited due to the fear of cancer misdiagnosis, patient mismanagement, and the related medicolegal issues. Thus, alternative non-optical resection and discard strategies are imperative for improving the accuracy and safety of optical diagnosis for adaptation to clinical practice. These strategies should follow simple clinical criteria and do not require additional education or image enhanced devices. Furthermore, the safe practice of optical diagnosis, adequate decision-making regarding polypectomy technique, or surveillance interval depends on accurate polyp size estimation. The inter-endoscopist variability in polyp sizing necessitates the development of reliable and validated methods to enhance the accuracy of size measurement. A virtual scale integrated into a high-definition endoscope is currently available for automated polyp sizing, but its clinical feasibility has not yet been demonstrated. In addition to the points mentioned above, a high-quality colonoscopy requires the complete examination of the entire colonic mucosa, as well as the visualization of the ileocecal valve and appendiceal orifice. To date, no computer-based solution has been able to support endoscopists during live colonoscopies by automatically detecting and differentiating cecal landmarks. Aims: The aims of this thesis are: 1) to investigate the effect of limiting optical diagnosis to polyps 1–3mm on the safety of optical diagnosis for the management of diminutive polyps and the acceptance of endoscopists for its use in real-time practices while preserving its time- and cost-effectiveness potentials; 2) to develop and examine non-optical resect and discard strategies that can replace optical diagnosis while offering the same time- and cost-saving potentials; 3) to examine the relative accuracy of a virtual scale endoscope for measuring polyp size; 4) to train, validate, and test an artificial intelligence-empower model that can predict the completeness of a colonoscopy procedure by identifying cecal anatomical landmarks (i.e., ileocecal valve and appendiceal orifice) and differentiating them from one another, polyps, and normal mucosa. Methods: To achieve the first aim of this thesis, a post-hoc analysis of three prospective studies was performed to evaluate the proportion of patients in which advanced adenomas were found and optical diagnosis resulted in delayed surveillance in three polyp size groups: 1‒3, 1‒5, and 1‒10 mm. To achieve the second aim of this thesis, two non-optical strategies were developed and tested in two prospective studies: a location-based resect and discard strategy that uses anatomical polyp location to classify colon polyps into non-neoplastic or low-risk neoplastic and a polyp-based resect and discard strategy that assigns surveillance intervals based on polyp number and size. In all three studies, the agreement of assigning surveillance intervals based on high-confidence optical diagnosis or non-optical strategies with pathology-based recommendations, as well as the proportion of avoided pathology examinations and the proportion of immediate surveillance interval communications, was evaluated. The third aim of this thesis was addressed through a prospective pilot feasibility study that used the measurement of polyp specimens immediately after retrieving, following a polypectomy by a Vernier caliper as a reference to compare the relative accuracy of polyp size measurements between endoscopists and a virtual scale endoscope. Finally, the fourth aim of this thesis was assessed through prospective recording and annotation of colonoscopy videos. Unaltered images of polyp, ileocecal valve, appendiceal orifice and normal mucosa were extracted and used to develop and test a deep convolutional neural network model for classifying images for the containing landmarks. Results: Reducing the threshold of optical diagnosis would promote the safety of optical diagnosis by significantly decreasing the risk of discarding a polyp with advanced histology or the mismanagement of a patient with such polyps. Additionally, the non-optical resect and discard strategies could surpass the benchmark of at least 90% agreement in the assignment of post-polypectomy surveillance intervals compared with decisions based on pathologic assessment. Moreover, the virtual scale endoscope was demonstrated to be more accurate than visual estimation of polyp size in real-time. Finally, a deep learning model proved to be highly effective in detecting cecal landmarks, polyps, and normal mucosa, both individually and in combination. Discussion: Optical histology prediction of polyps 1‒3 mm in size is an effective approach to enhance the safety and feasibility of resect and discard strategy in practice. Non-optical resect and discard approaches also offer feasible alternatives to optical diagnosis when endoscopists are unable to meet the conditions for routine implementation of optical diagnosis, or when image-enhanced technology is not accessible. Both optical and non-optical resect and discard strategies could reduce additional costs related to histopathology examinations and facilitate the communication of the next surveillance interval in the same day as the index colonoscopy. A virtual scale endoscope would facilitate the use of optical diagnosis for the detection of diminutive polyps and allows for appropriate decision-making during and after colonoscopy. Additionally, the deep learning model may be useful in promoting and monitoring the quality of colonoscopies through the prediction of a complete colonoscopy. This technology may be incorporated as part of a platform for auditing and report generation that eliminates the need for human intervention. Conclusion: The results presented in this thesis will contribute to the current state of knowledge in colonoscopy practice regarding strategies for improving the efficacy of colonoscopy in the prevention of colorectal cancer. This study will provide valuable insights for future researchers interested in developing effective methods for treating diminutive colorectal polyps. Optical diagnosis requires further training and implementation using computer-based characterization modules. Furthermore, despite the slow adoption of computer-based solutions in clinical practice, AI-empowered colonoscopy will eventually pave the way for automatic detection, characterization, and semi-automated completion of procedure reports in the future

    Optimizing performance and techniques in advanced pancreatobiliary endoscopy

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    Optimizing performance and techniques in advanced pancreatobiliary endoscopy

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    Molecular Fluorescence Endoscopy:clinical development and validation within the lower gastrointestinal tract

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    Molecular Fluorescence Imaging is a new and evolving imaging technique. It uses exogenous fluorescent tracers that bind to specific proteins, thereby fluorescently highlighting the tissue of interest as a red-flag for the clinician. White-light endoscopy is the current gold standard for colorectal adenoma and cancer screening, where gastroenterologist evaluate aberrant tissue based on morphological aspects and architectural changes only. As adenoma miss rates in colonoscopy are unacceptably high, especially in high-risk populations, we describe in this thesis a clinical dose-escalation study towards the use of Molecular Fluorescence Endoscopy for colorectal adenoma detection. This technique showed to have the potential to improve the identification of colorectal adenomas. In the second part of this thesis, the added value of a restaging CT scan after neoadjuvant chemoradiotherapy is shown for patients with locally advanced rectal cancer, as it may detect newly developed metastases. In a clinical study, the potential of Molecular Fluorescence Endoscopy as tool to aid clinical response assessment is shown, in patients with locally advanced rectal cancer. When this technique is performed after neoadjuvant chemoradiotherapy, it can help identifying the presence of residual tumor and has potential to predict pathological compete response (pCR) and in this way help selecting patients suitable for organ-preserving strategies. Additionally, we show in a proof-of-concept study that molecular fluorescence imaging performed peri-operative can help the surgeon evaluating the circumferential resection margin at the surgical theatre, preventing under- and overtreatment of patients in the future

    Research Day 2023 Program

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    Dynamic Volume Rendering of Functional Medical Data on Dissimilar Hardware Platforms

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    In the last 30 years, medical imaging has become one of the most used diagnostic tools in the medical profession. Computed Tomography (CT) and Magnetic Resonance Imaging (MRI) technologies have become widely adopted because of their ability to capture the human body in a non-invasive manner. A volumetric dataset is a series of orthogonal 2D slices captured at a regular interval, typically along the axis of the body from the head to the feet. Volume rendering is a computer graphics technique that allows volumetric data to be visualized and manipulated as a single 3D object. Iso-surface rendering, image splatting, shear warp, texture slicing, and raycasting are volume rendering methods, each with associated advantages and disadvantages. Raycasting is widely regarded as the highest quality renderer of these methods. Originally, CT and MRI hardware was limited to providing a single 3D scan of the human body. The technology has improved to allow a set of scans capable of capturing anatomical movements like a beating heart. The capturing of anatomical data over time is referred to as functional imaging. Functional MRI (fMRI) is used to capture changes in the human body over time. While fMRI’s can be used to capture any anatomical data over time, one of the more common uses of fMRI is to capture brain activity. The fMRI scanning process is typically broken up into a time consuming high resolution anatomical scan and a series of quick low resolution scans capturing activity. The low resolution activity data is mapped onto the high resolution anatomical data to show changes over time. Academic research has advanced volume rendering and specifically fMRI volume rendering. Unfortunately, academic research is typically a one-off solution to a singular medical case or set of data, causing any advances to be problem specific as opposed to a general capability. Additionally, academic volume renderers are often designed to work on a specific device and operating system under controlled conditions. This prevents volume rendering from being used across the ever expanding number of different computing devices, such as desktops, laptops, immersive virtual reality systems, and mobile computers like phones or tablets. This research will investigate the feasibility of creating a generic software capability to perform real-time 4D volume rendering, via raycasting, on desktop, mobile, and immersive virtual reality platforms. Implementing a GPU-based 4D volume raycasting method for mobile devices will harness the power of the increasing number of mobile computational devices being used by medical professionals. Developing support for immersive virtual reality can enhance medical professionals’ interpretation of 3D physiology with the additional depth information provided by stereoscopic 3D. The results of this research will help expand the use of 4D volume rendering beyond the traditional desktop computer in the medical field. Developing the same 4D volume rendering capabilities across dissimilar platforms has many challenges. Each platform relies on their own coding languages, libraries, and hardware support. There are tradeoffs between using languages and libraries native to each platform and using a generic cross-platform system, such as a game engine. Native libraries will generally be more efficient during application run-time, but they require different coding implementations for each platform. The decision was made to use platform native languages and libraries in this research, whenever practical, in an attempt to achieve the best possible frame rates. 4D volume raycasting provides unique challenges independent of the platform. Specifically, fMRI data loading, volume animation, and multiple volume rendering. Additionally, real-time raycasting has never been successfully performed on a mobile device. Previous research relied on less computationally expensive methods, such as orthogonal texture slicing, to achieve real-time frame rates. These challenges will be addressed as the contributions of this research. The first contribution was exploring the feasibility of generic functional data input across desktop, mobile, and immersive virtual reality. To visualize 4D fMRI data it was necessary to build in the capability to read Neuroimaging Informatics Technology Initiative (NIfTI) files. The NIfTI format was designed to overcome limitations of 3D file formats like DICOM and store functional imagery with a single high-resolution anatomical scan and a set of low-resolution anatomical scans. Allowing input of the NIfTI binary data required creating custom C++ routines, as no object oriented APIs freely available for use existed. The NIfTI input code was built using C++ and the C++ Standard Library to be both light weight and cross-platform. Multi-volume rendering is another challenge of fMRI data visualization and a contribution of this work. fMRI data is typically broken into a single high-resolution anatomical volume and a series of low-resolution volumes that capture anatomical changes. Visualizing two volumes at the same time is known as multi-volume visualization. Therefore, the ability to correctly align and scale the volumes relative to each other was necessary. It was also necessary to develop a compositing method to combine data from both volumes into a single cohesive representation. Three prototype applications were built for the different platforms to test the feasibility of 4D volume raycasting. One each for desktop, mobile, and virtual reality. Although the backend implementations were required to be different between the three platforms, the raycasting functionality and features were identical. Therefore, the same fMRI dataset resulted in the same 3D visualization independent of the platform itself. Each platform uses the same NIfTI data loader and provides support for dataset coloring and windowing (tissue density manipulation). The fMRI data can be viewed changing over time by either animation through the time steps, like a movie, or using an interface slider to “scrub” through the different time steps of the data. The prototype applications data load times and frame rates were tested to determine if they achieved the real-time interaction goal. Real-time interaction was defined by achieving 10 frames per second (fps) or better, based on the work of Miller [1]. The desktop version was evaluated on a 2013 MacBook Pro running OS X 10.12 with a 2.6 GHz Intel Core i7 processor, 16 GB of RAM, and a NVIDIA GeForce GT 750M graphics card. The immersive application was tested in the C6 CAVE™, a 96 graphics node computer cluster comprised of NVIDIA Quadro 6000 graphics cards running Red Hat Enterprise Linux. The mobile application was evaluated on a 2016 9.7” iPad Pro running iOS 9.3.4. The iPad had a 64-bit Apple A9X dual core processor with 2 GB of built in memory. Two different fMRI brain activity datasets with different voxel resolutions were used as test datasets. Datasets were tested using both the 3D structural data, the 4D functional data, and a combination of the two. Frame rates for the desktop implementation were consistently above 10 fps, indicating that real-time 4D volume raycasting is possible on desktop hardware. The mobile and virtual reality platforms were able to perform real-time 3D volume raycasting consistently. This is a marked improvement for 3D mobile volume raycasting that was previously only able to achieve under one frame per second [2]. Both VR and mobile platforms were able to raycast the 4D only data at real-time frame rates, but did not consistently meet 10 fps when rendering both the 3D structural and 4D functional data simultaneously. However, 7 frames per second was the lowest frame rate recorded, indicating that hardware advances will allow consistent real-time raycasting of 4D fMRI data in the near future

    Competence and quality assessment: the future of training in GI endoscopy

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    __Abstract__ __Introduction__: Training procedural skills in gastrointestinal endoscopy once focused on threshold numbers. However, as threshold numbers poorly reflect individual competence, the focus gradually shifts towards a more individual approach. Tools to assess and document individual learning progress are being developed and incorporated in dedicated training curricula. However, there is a lack of consensus and training guidelines differ worldwide, which reflects uncertainties on optimal set-up of a training program. __Aims__: The primary aim of this systematic review was to evaluate the currently available literature for the use of training and assessment methods in GI endoscopy. Secondly, we aimed to identify the role of simulator-based training as well as the value of continuous competence assessment in patient-based training. Thirdly, we aimed to propose a structured training curriculum based on the presented evidence. __Method__s: A literature search was carried out in the available medical and educational literature databases. The results were systematically reviewed and studies were included using a predefined protocol with independent assessment by two reviewers and a final consensus round. __Results__: The literature search yielded 5846 studies. Ninety-four relevant studies on simulators, assessment methods, learning curves and training programs for gastrointestinal endoscopy met the inclusion criteria. Twenty-seven studies on simulator validation were included. Good validity was demonstrated for four simulators. Twenty-three studies reported on simulator training and learning curves, including 17 RCT’s. Increased performance on a virtual reality simulator was shown in all studies. Improved performance in patient-based assessment was demonstrated in 14 studies. Four studies reported on the use of simulators for assessment of competence levels. Simulator-based performance did not reflect competence in patientbased endoscopy. Eight out of fourteen studies on colonoscopy, ERCP and EUS reported on learning curves in patient-based endoscopy and proved the value of this approach for measuring performance. Ten studies explored the numbers needed to gain competence, but the proposed thresholds varied widely between them. Five out of nine studies describing the development and evaluation of assessment tools for gastrointestinal endoscopy provided insight in performance of endoscopists. Five out of seven studies proved that intense training programs result in good performance. __Conclusions__: The use of validated virtual reality simulators in the early training setting accelerates learning of practical skills. Learning curves are valuable for continuous assessment of performance and are more relevant than threshold numbers. Future research will strengthen these conclusions by evaluating simulation-based as well as patient-based training in gastrointestinal endoscopy. A complete curriculum with assessment of competence throughout training needs to be developed for all gastrointestinal endoscopy procedures
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