Combining semantic web technologies with evolving fuzzy classifier eClass for EHR-based phenotyping : a feasibility study

In parallel to nation-wide efforts for setting up shared electronic health records (EHRs) across healthcare settings, several large-scale national and international projects are developing, validating, and deploying electronic EHR oriented phenotype algorithms that aim at large-scale use of EHRs data for genomic studies. A current bottleneck in using EHRs data for obtaining computable phenotypes is to transform the raw EHR data into clinically relevant features. The research study presented here proposes a novel combination of Semantic Web technologies with the on-line evolving fuzzy classifier eClass to obtain and validate EHR-driven computable phenotypes derived from 1956 clinical statements from EHRs. The evaluation performed with clinicians demonstrates the feasibility and practical acceptability of the approach proposed

Knowledge-Driven Intelligent Survey Systems Towards Open Science

Open Access via Springer Compact Agreement. Acknowledgements: We are grateful to all of our survey participants, and to Anne Eschenbruecher, Sally Lamond, and Evelyn Williams for their assistance in participant recruitment. We are also grateful to Patrik Bansky for his work on refinement of the survey system.Peer reviewedPublisher PD

Approaches to uncertain or imprecise rules: a survey

With this paper we present a brief overview of selected prominent approaches to rule frameworks and formal rule languages for the representation of and reasoning with uncertain or imprecise knowledge. This work covers selected probabilistic and possibilistic logics, as well as implementations of uncertainty and possibilistic reasoning in rule engine software

Viewpoints on emergent semantics

Authors include:Philippe Cudr´e-Mauroux, and Karl Aberer (editors), Alia I. Abdelmoty, Tiziana Catarci, Ernesto Damiani, Arantxa Illaramendi, Robert Meersman, Erich J. Neuhold, Christine Parent, Kai-Uwe Sattler, Monica Scannapieco, Stefano Spaccapietra, Peter Spyns, and Guy De Tr´eWe introduce a novel view on how to deal with the problems of semantic interoperability in distributed systems. This view is based on the concept of emergent semantics, which sees both the representation of semantics and the discovery of the proper interpretation of symbols as the result of a self-organizing process performed by distributed agents exchanging symbols and having utilities dependent on the proper interpretation of the symbols. This is a complex systems perspective on the problem of dealing with semantics. We highlight some of the distinctive features of our vision and point out preliminary examples of its applicatio

A Knowledge Graph Based Approach to Social Science Surveys

Peer reviewedPublisher PD

A Knowledge Graph Based Approach to Social Science Surveys

Recent success of knowledge graphs has spurred interest in applying them in open science, such as on intelligent survey systems for scientists. However, efforts to understand the quality of candidate survey questions provided by these methods have been limited. Indeed, existing methods do not consider the type of on-the-fly content planning that is possible for face-to-face surveys and hence do not guarantee that selection of subsequent questions is based on response to previous questions in a survey. To address this limitation, we propose a dynamic and informative solution for an intelligent survey system that is based on knowledge graphs. To illustrate our proposal, we look into social science surveys, focusing on ordering the questions of a questionnaire component by their level of acceptance, along with conditional triggers that further customise participants' experience. Our main findings are: (i) evaluation of the proposed approach shows that the dynamic component can be beneficial in terms of lowering the number of questions asked per variable, thus allowing more informative data to be collected in a survey of equivalent length; and (ii) a primary advantage of the proposed approach is that it enables grouping of participants according to their responses, so that participants are not only served appropriate follow-up questions, but their responses to these questions may be analysed in the context of some initial categorisation. We believe that the proposed approach can easily be applied to other social science surveys based on grouping definitions in their contexts. The knowledge-graph-based intelligent survey approach proposed in our work allows online questionnaires to approach face-to-face interaction in their level of informativity and responsiveness, as well as duplicating certain advantages of interview-based data collection

A Semi-automated Ontology Construction for Legal Question Answering

Open Access via Springer Compact Agreement.Peer reviewedPublisher PD