Fusion approach for remotely sensed mapping of agriculture (FARMA):A scalable open source method for land cover monitoring using data fusion

The increasing availability of very-high resolution (VHR; &lt;2 m) imagery has the potential to enable agricultural monitoring at increased resolution and cadence, particularly when used in combination with widely available moderate-resolution imagery. However, scaling limitations exist at the regional level due to big data volumes and processing constraints. Here, we demonstrate the Fusion Approach for Remotely Sensed Mapping of Agriculture (FARMA), using a suite of open source software capable of efficiently characterizing time-series field-scale statistics across large geographical areas at VHR resolution. We provide distinct implementation examples in Vietnam and Senegal to demonstrate the approach using WorldView VHR optical, Sentinel-1 Synthetic Aperture Radar, and Sentinel-2 and Sentinel-3 optical imagery. This distributed software is open source and entirely scalable, enabling large area mapping even with modest computing power. FARMA provides the ability to extract and monitor sub-hectare fields with multisensor raster signals, which previously could only be achieved at scale with large computational resources. Implementing FARMA could enhance predictive yield models by delineating boundaries and tracking productivity of smallholder fields, enabling more precise food security observations in low and lower-middle income countries.</p

Modelling spatial variability of coffee (Coffea Arabica L.) crop condition with multispectral remote sensing data.

Doctor of Philosophy in Environmental Science. University of KwaZulu-Natal, Pietermaritzburg, 2017.Abstract available in PDF file

Evaluating remote sensing datasets and machine learning algorithms for mapping plantations and successional forests in Phnom Kulen National Park of Cambodia

International audienceThis study develops a modelling framework by utilizing multi-sensor imagery for classifying different forest and land use types in the Phnom Kulen National Park (PKNP) in Cambodia. Three remote sensing datasets (Landsat optical data, ALOS L-band data and LiDAR derived Canopy Height Model (CHM)) were used in conjunction with three different machine learning (ML) regression techniques (Support Vector Machines (SVM), Random Forests (RF) and Artificial Neural Networks (ANN)). These ML methods were implemented on (a) Landsat spectral data, (b) Landsat spectral band & ALOS backscatter data, and (c) Landsat spectral band, ALOS backscatter data, & LiDAR CHM data. The Landsat-ALOS combination produced more accurate classification results (95% overall accuracy with SVM) compared to Landsat-only bands for all ML models. Inclusion of LiDAR CHM (which is a proxy for vertical canopy heights) improved the overall accuracy to 98%. The research establishes that majority of PKNP is dominated by cashew plantations and the nearly intact forests are concentrated in the more inaccessible parts of the park. The findings demonstrate how different RS datasets can be used in conjunction with different ML models to map forests that had undergone varying levels of degradation and plantations

Mapping Prosopis glandulosa (mesquite) invasion in the arid environment of South African using remote sensing techniques

A dissertation submitted to the School of Geography, Archaeology and Environmental Studies, Faculty of Science, University of the Witwatersrand, Johannesburg, in fulfilment of requirements for the degree of Master of Science in Environmental Sciences. Johannesburg, March 2016.Mapping Prosopis glandulosa (mesquite) invasion in the arid environment of South Africa using remote sensing techniques Mureriwa, Nyasha Abstract Decades after the first introduction of the Prosopis spp. (mesquite) to South Africa in the late 1800s for its benefits, the invasive nature of the species became apparent as its spread in regions of South Africa resulting in devastating effects to biodiversity, ecosystems and the socio-economic wellbeing of affected regions. Various control and management practices that include biological, physical, chemical and integrated methods have been tested with minimal success as compared to the rapid spread of the species. From previous studies, it has been noted that one of the reasons for the low success rates in mesquite control and management is a lack of sufficient information on the species invasion dynamic in relation to its very similar co-existing species. In order to bridge this gap in knowledge, vegetation species mapping techniques that use remote sensing methods need to be tested for the monitoring, detection and mapping of the species spread. Unlike traditional field survey methods, remote sensing techniques are better at monitoring vegetation as they can cover very large areas and are time-effective and cost-effective. Thus, the aim of this research was to examine the possibility of mapping and spectrally discriminating Prosopis glandulosa from its native co-existing species in semi-arid parts of South Africa using remote sensing methods. The specific objectives of the study were to investigate the spectral separability between Prosopis glandulosa and its co-existing species using field spectral data as well as to upscale the results to different satellites resolutions. Two machine learning algorithms (Random Forest (RF) and Support Vector Machines (SVM)) were also tested in the mapping processes. The first chapter of the study evaluated the spectral discrimination of Prosopis glandulosa from three other species (Acacia karoo, Acacia mellifera and Ziziphus mucronata) in the study area using in-situ spectroscopy in conjunction with the newly developed guided regularized random forest (GRRF) algorithm in identifying key wavelengths for multiclass classification. The GRRF algorithm was used as a method of reducing the problem of high dimensionality associated with hyperspectral data. Results showed that there was an increase in the accuracy of discrimination between the four species when the full set of 1825 wavelengths was used in classification (79.19%) as compared to the classification used by the 11 key wavelengths identified by GRRF (88.59%). Results obtained from the second chapter showed that it is possible to spatially discriminate mesquite from its co-existing acacia species and other general land-cover types at a 2 m resolution with overall accuracies of 86.59% for RF classification and 85.98% for SVM classification. The last part of the study tested the use of the more cost effective SPOT-6 imagery and the RF and SVM algorithms in mapping Prosopis glandulosa invasion and its co-existing indigenous species. The 6 m resolution analysis obtained accuracies of 78.46% for RF and 77.62% for SVM. Overall it was concluded that spatial and spectral discrimination of Prosopis glandulosa from its native co-existing species in semi-arid South Africa was possible with high accuracies through the use of (i) two high resolution, new generation sensors namely, WorldView-2 and SPOT-6; (ii) two robust classification algorithms specifically, RF and SVM and (iii) the newly developed GRRF algorithm for variable selection and reducing the high dimensionality problem associated with hyperspectral data. Some recommendations for future studies include the replication of this study on a larger scale in different invaded areas across the country as well as testing the robustness of the RF and SVM classifiers by making use of other machine learning algorithms and classification methods in species discrimination. Keywords: Prosopis glandulosa, field spectroscopy, cost effectiveness, Guided Regularised Random Forest, Support Vector Machines, Worldview-2, Spot-

Automatic detection of uprooted orchards based on orthophoto texture analysis

Permanent crops, such as olive groves, vineyards and fruit trees, are important in European agriculture because of their spatial and economic relevance. Agricultural geographical databases (AGDBs) are commonly used by public bodies to gain knowledge of the extension covered by these crops and to manage related agricultural subsidies and inspections. However, the updating of these databases is mostly based on photointerpretation, and thus keeping this information up-to-date is very costly in terms of time and money. This paper describes a methodology for automatic detection of uprooted orchards (parcels where fruit trees have been eliminated) based on the textural classification of orthophotos with a spatial resolution of 0.25 m. The textural features used for this classification were derived from the grey level co-occurrence matrix (GLCM) and wavelet transform, and were selected through principal components (PCA) and separability analyses. Next, a Discriminant Analysis classification algorithm was used to detect uprooted orchards. Entropy, contrast and correlation were found to be the most informative textural features obtained from the co-occurrence matrix. The minimum and standard deviation in plane 3 were the selected features based on wavelet transform. The classification based on these features achieved a true positive rate (TPR) of over 80% and an accuracy (A) of over 88%. As a result, this methodology enabled reducing the number of fields to photointerpret by 60–85%, depending on the membership threshold value selected. The proposed approach could be easily adopted by different stakeholders and could increase significantly the efficiency of agricultural database updating tasks.This study was funded by the Spanish National Institute for Agricultural and Food Research and Technology (INIA) through its training program for researchers

Assessing the transferability of machine learning algorithms using cloud computing and earth observation datasets for agricultural land use/cover mapping

Mapping of agricultural land use/cover was initiated since the past several decades for land use planning, change detection analysis, crop yield monitoring etc. using earth observation datasets and traditional parametric classifiers. Recently, machine learning, cloud computing, Google Earth Engine (GEE) and open source earth observation datasets widely used for fast, cost-efficient and precise agricultural land use/cover mapping and change detection analysis. Main objective of this study was to assess the transferability of the machine learning algorithms for land use/cover mapping using cloud computing and open source earth observation datasets. In this study, the Landsat TM (L5, L8) of 2018, 2009 and 1998 were selected and median reflectance of spectral bands in Kharif and Rabi season were used for the classification. In addition, three important machine learning algorithms such as Support Vector Machine with Radial Basis Function (SVM-RBF), Random forest (RF) and Classification and Regression Tree (CART) were selected to evaluate the performance in transferability for agricultural land use classification using GEE. Seven land use/cover classes such as built-up, cropland, fallow land, vegetation etc. were selected based on literature review and local land use classification scheme. In this classification, several strategies were employed such as feature extraction, feature selection, parameter tuning, sensitivity analysis on size of training samples, transferability analysis to assess the performance of the selected machine learning algorithms for land use/cover classification. The result shows that SVM-RBF outperforms the RF and CART for both spatial and temporal transferability analysis. This result is very helpful for agriculture and remote sensing scientist to suggest promising guideline to land use planner and policy-makers for efficient land use mapping, change detection analysis, land use planning and natural resource management

Advances in Image Processing, Analysis and Recognition Technology

For many decades, researchers have been trying to make computers’ analysis of images as effective as the system of human vision is. For this purpose, many algorithms and systems have previously been created. The whole process covers various stages, including image processing, representation and recognition. The results of this work can be applied to many computer-assisted areas of everyday life. They improve particular activities and provide handy tools, which are sometimes only for entertainment, but quite often, they significantly increase our safety. In fact, the practical implementation of image processing algorithms is particularly wide. Moreover, the rapid growth of computational complexity and computer efficiency has allowed for the development of more sophisticated and effective algorithms and tools. Although significant progress has been made so far, many issues still remain, resulting in the need for the development of novel approaches

Operationalization of Remote Sensing Solutions for Sustainable Forest Management

The great potential of remote sensing technologies for operational use in sustainable forest management is addressed in this book, which is the reprint of papers published in the Remote Sensing Special Issue “Operationalization of Remote Sensing Solutions for Sustainable Forest Management”. The studies come from three continents and cover multiple remote sensing systems (including terrestrial mobile laser scanning, unmanned aerial vehicles, airborne laser scanning, and satellite data acquisition) and a diversity of data processing algorithms, with a focus on machine learning approaches. The focus of the studies ranges from identification and characterization of individual trees to deriving national- or even continental-level forest attributes and maps. There are studies carefully describing exercises on the case study level, and there are also studies introducing new methodologies for transdisciplinary remote sensing applications. Even though most of the authors look forward to continuing their research, nearly all studies introduced are ready for operational use or have already been implemented in practical forestry

Remote Sensing in Mangroves

The book highlights recent advancements in the mapping and monitoring of mangrove forests using earth observation satellite data. New and historical satellite data and aerial photographs have been used to map the extent, change and bio-physical parameters, such as phenology and biomass. Research was conducted in different parts of the world. Knowledge and understanding gained from this book can be used for the sustainable management of mangrove forests of the worl

Big Earth Data and Machine Learning for Sustainable and Resilient Agriculture

Big streams of Earth images from satellites or other platforms (e.g., drones and mobile phones) are becoming increasingly available at low or no cost and with enhanced spatial and temporal resolution. This thesis recognizes the unprecedented opportunities offered by the high quality and open access Earth observation data of our times and introduces novel machine learning and big data methods to properly exploit them towards developing applications for sustainable and resilient agriculture. The thesis addresses three distinct thematic areas, i.e., the monitoring of the Common Agricultural Policy (CAP), the monitoring of food security and applications for smart and resilient agriculture. The methodological innovations of the developments related to the three thematic areas address the following issues: i) the processing of big Earth Observation (EO) data, ii) the scarcity of annotated data for machine learning model training and iii) the gap between machine learning outputs and actionable advice. This thesis demonstrated how big data technologies such as data cubes, distributed learning, linked open data and semantic enrichment can be used to exploit the data deluge and extract knowledge to address real user needs. Furthermore, this thesis argues for the importance of semi-supervised and unsupervised machine learning models that circumvent the ever-present challenge of scarce annotations and thus allow for model generalization in space and time. Specifically, it is shown how merely few ground truth data are needed to generate high quality crop type maps and crop phenology estimations. Finally, this thesis argues there is considerable distance in value between model inferences and decision making in real-world scenarios and thereby showcases the power of causal and interpretable machine learning in bridging this gap.Comment: Phd thesi