Independent Weighted Feature Set with Linked Feature Reduction Model for Lung Cancer Stage Detection using Machine Learning Model

Lung cancer is a potentially fatal disease that is affected to 18% of population every year. Finding the exact location of a cancer and identification of lung cancer stage continues to be difficult for medical professionals. The true reason for cancer and a comprehensive cure is still unknown. Treatment for cancer is possible if detected at an early stage with accurate stage detection. Finding areas of the lung that have been impacted by cancer requires the use of image processing techniques like noise reduction, highlight filtration, recognizable proof of effected lung regions, and perhaps a comparison with data on the curative history of lung cancer. This research investigates whether or not technology enabled by machine learning algorithms and image processing can correctly classifies and predict lung cancer. For images, the dimensional feature channel is used in the preliminary processing stage. The proposed model considers Magnetic Resonance Imaging (MRI) images for detection of lung cancer. This research proposes an Independent Weighted Feature Set with Linked Feature Reduction (IWFS-LFR) model for accurate lung cancer stage detection based on the size of the tumour. The tumour stage can be accurately predicted using the feature attribute similarity calculation for accurate detection of lung cancer stage for proper diagnosis. The proposed model when contrasted with the traditional model exhibits better performance

Lung disease classification using GLCM and deep features from different deep learning architectures with principal component analysis

Lung disease classification is an important stage in implementing a Computer Aided Diagnosis (CADx) system. CADx systems can aid doctors as a second rater to increase diagnostic accuracy for medical applications. It has also potential to reduce waiting time and increasing patient throughput when hospitals high workload. Conventional lung classification systems utilize textural features. However textural features may not be enough to describe properties of an image. Deep features are an emerging source of features that can combat the weaknesses of textural features. The goal of this study is to propose a lung disease classification framework using deep features from five different deep networks and comparing its results with the conventional Gray-level Co-occurrence Matrix (GLCM). This study used a dataset of 81 diseased and 15 normal patients with five levels of High Resolution Computed Tomography (HRCT) slices. A comparison of five different deep learning networks namely, Alexnet, VGG16, VGG19, Res50 and Res101, with textural features from Gray-level Co-occurrence Matrix (GLCM) was performed. This study used a K-fold validation protocol with K = 2, 3, 5 and 10. This study also compared using five classifiers; Decision Tree, Support Vector Machine, Linear Discriminant Analysis, Regression and k-nearest neighbor (k-NN) classifiers. The usage of PCA increased the classification accuracy from 92.01% to 97.40% when using k-NN classifier. This was achieved with only using 14 features instead of the initial 1000 features. Using SVM classifier, a maximum accuracy of 100% was achieved when using all five of the deep learning features. Thus deep features show a promising application for classifying diseased and normal lungs

The impact of arterial input function determination variations on prostate dynamic contrast-enhanced magnetic resonance imaging pharmacokinetic modeling: a multicenter data analysis challenge, part II

This multicenter study evaluated the effect of variations in arterial input function (AIF) determination on pharmacokinetic (PK) analysis of dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) data using the shutter-speed model (SSM). Data acquired from eleven prostate cancer patients were shared among nine centers. Each center used a site-specific method to measure the individual AIF from each data set and submitted the results to the managing center. These AIFs, their reference tissue-adjusted variants, and a literature population-averaged AIF, were used by the managing center to perform SSM PK analysis to estimate Ktrans (volume transfer rate constant), ve (extravascular, extracellular volume fraction), kep (efflux rate constant), and τi (mean intracellular water lifetime). All other variables, including the definition of the tumor region of interest and precontrast T1 values, were kept the same to evaluate parameter variations caused by variations in only the AIF. Considerable PK parameter variations were observed with within-subject coefficient of variation (wCV) values of 0.58, 0.27, 0.42, and 0.24 for Ktrans, ve, kep, and τi, respectively, using the unadjusted AIFs. Use of the reference tissue-adjusted AIFs reduced variations in Ktrans and ve (wCV = 0.50 and 0.10, respectively), but had smaller effects on kep and τi (wCV = 0.39 and 0.22, respectively). kep is less sensitive to AIF variation than Ktrans, suggesting it may be a more robust imaging biomarker of prostate microvasculature. With low sensitivity to AIF uncertainty, the SSM-unique τi parameter may have advantages over the conventional PK parameters in a longitudinal study

Development of an image guidance system for laparoscopic liver surgery and evaluation of optical and computer vision techniques for the assessment of liver tissue

Introduction: Liver resection is increasingly being carried out via the laparoscopic approach (keyhole surgery) because there is mounting evidence that it benefits patients by reducing pain and length of hospitalisation. There are however ongoing concerns about oncological radicality (i.e. ability to completely remove cancer) and an inability to control massive haemorrhage. These issues can partially be attributed to a loss of sensation such as depth perception, tactile feedback and a reduced field of view. Utilisation of optical imaging and computer vision may be able to compensate for some of the lost sensory input because these modalities can facilitate visualisation of liver tissue and structural anatomy. Their use in laparoscopy is attractive because it is easy to adapt or integrate with existing technology. The aim of this thesis is to explore to what extent this technology can aid in the detection of normal and abnormal liver tissue and structures. / Methods: The current state of the art for optical imaging and computer vision in laparoscopic liver surgery is assessed in a systematic review. Evaluation of confocal laser endomicroscopy is carried out on a murine and porcine model of liver disease. Multispectral near infrared imaging is evaluated on ex-vivo liver specimen. Video magnification is assessed on a mechanical flow phantom and a porcine model of liver disease. The latter model was also employed to develop a computer vision based image guidance system for laparoscopic liver surgery. This image guidance system is further evaluated in a clinical feasibility study. Where appropriate, experimental findings are substantiated with statistical analysis. / Results: Use of confocal laser endomicroscopy enabled discrimination between cancer and normal liver tissue with a sub-millimetre precision. This technology also made it possible to verify the adequacy of thermal liver ablation. Multispectral imaging, at specific wavelengths was shown to have the potential to highlight the presence of colorectal and hepatocellular cancer. An image reprocessing algorithm is proposed to simplify visual interpretation of the resulting images. It is shown that video magnification can determine the presence of pulsatile motion but that it cannot reliably determine the extent of motion. Development and performance metrics of an image guidance system for laparoscopic liver surgery are outlined. The system was found to improve intraoperative orientation more development work is however required to enable reliable prediction of oncological margins. / Discussion: The results in this thesis indicate that confocal laser endomicroscopy and image guidance systems have reached a development stage where their intraoperative use may benefit surgeons by visualising features of liver anatomy and tissue characteristics. Video magnification and multispectral imaging require more development and suggestions are made to direct this work. It is also highlighted that it is crucial to standardise assessment methods for these technologies which will allow a more direct comparison between the outcomes of different groups. Limited imaging depth is a major restriction of these technologies but this may be overcome by combining them with preoperatively obtained imaging data. Just like laparoscopy, optical imaging and computer vision use functions of light, a shared characteristic that makes their combined use complementary

A 3-D Riesz-Covariance Texture Model for Prediction of Nodule Recurrence in Lung CT

This paper proposes a novel imaging biomarker of lung cancer relapse from 3-D texture analysis of CT images. Three-dimensional morphological nodular tissue properties are described in terms of 3-D Riesz-wavelets. The responses of the latter are aggregated within nodular regions by means of feature covariances, which leverage rich intra- and inter-variations of the feature space dimensions. When compared to the classical use of the average for feature aggregation, feature covariances preserve spatial co-variations between features. The obtained Riesz-covariance descriptors lie on a manifold governed by Riemannian geometry allowing geodesic measurements and differentiations. The latter property is incorporated both into a kernel for support vector machines (SVM) and a manifold-aware sparse regularized classifier. The effectiveness of the presented models is evaluated on a dataset of 110 patients with non-small cell lung carcinoma (NSCLC) and cancer recurrence information. Disease recurrence within a timeframe of 12 months could be predicted with an accuracy of 81.3-82.7%. The anatomical location of recurrence could be discriminated between local, regional and distant failure with an accuracy of 78.3-93.3%. The obtained results open novel research perspectives by revealing the importance of the nodular regions used to build the predictive models

A 3-D Riesz-covariance texture model for prediction of nodule recurrence in Lung CT

This paper proposes a novel imaging biomarker of lung cancer relapse from 3–D texture analysis of CT images. Three–dimensional morphological nodular tissue properties are described in terms of 3–D Riesz–wavelets. The responses of the latter are aggregated within nodular regions by means of feature covariances, which leverage rich intra– and inter– variations of the feature space dimensions. When compared to the classical use of the average for feature aggregation, feature covariances preserve spatial co–variations between features. The obtained Riesz–covariance descriptors lie on a manifold governed by Riemannian geometry allowing geodesic measurements and differentiations. The latter property is incorporated both into a kernel for support vector machines (SVM) and a manifold–aware sparse regularized classifier. The effectiveness of the presented models is evaluated on a dataset of 110 patients with non–small cell lung carcinoma (NSCLC) and cancer recurrence information. Disease recurrence within a timeframe of 12 months could be predicted with an accuracy of 81.3–82.7%. The anatomical location of recurrence could be discriminated between local, regional and distant failure with an accuracy of 78.3–93.3%. The obtained results open novel research perspectives by revealing the importance of the nodular regions used to build the predictive models