K-means Clustering In Knee Cartilage Classification: Data from the OAI

Knee osteoarthritis is a degenerative joint disease which affects people mostly from elderly population. Knee cartilage segmentation is still a driving force in managing early symptoms of knee pain and its consequences of physical disability. However, manual delineation of the tissue of interest by single trained operator is very time consuming. This project utilized a fully-automated segmentation that combined a series of image processing methods to process sagittal knee images. MRI scans undergo Bi-Bezier curve contrast enhancement which increase the distinctiveness of cartilage tissue. Bone-cartilage complex is extracted with dilation of mask resulted from region growing at distal femoral bone. Later, the processed image is clustered with k = 2, into two groups, including coarse cartilage group and background. The thin layer of cartilage is successfully clustered with satisfactory accuracy of 0.987±0.004, sensitivity 0.685±0.065 of and specificity of 0.994±0.004. The results obtained are promising and potentially replace the manual labelling process of training set in convolutional neural network model

Cartilage loss patterns within femorotibial contact regions during deep knee bend

AbstractOsteoarthritis (OA) can alter knee kinematics and stresses. The relationship between cartilage loss in OA and kinematics is unclear, with existing work focusing on static wear and morphology. In this work, femorotibial cartilage maps were coupled with kinematics to investigate the relationship between kinematics and cartilage loss, allowing for more precise treatment and intervention. Cartilage thickness maps were created from healthy and OA subgroups (varus, valgus, and neutral) and mapped to a statistical bone atlas. Video fluoroscopy determined contact regions from 0° to 120° flexion. Varus and valgus subgroups displayed different wear patterns across the range of flexion, with varus knees showing more loss in early flexion and valgus in deeper flexion. For the femur, varus knees had more wear in the medial compartment than neutral or valgus and most wear at both 0° and 20° flexion. In the lateral femoral compartment, the valgus subgroup showed significantly more wear from 20° to 60° flexion as compared to other angles, though varus knees displayed highest magnitude of wear. For the tibia, most medial wear occurred at 0–40° flexion and most lateral occurred after 60° flexion. Knowing more about cartilage changes in OA knees provides insight as to expected wear or stresses on implanted components after arthroplasty. Combining cartilage loss patterns with kinematics allows for pre-surgical intervention and treatments tailored to the patient׳s alignment and kinematics. Reported wear patterns may also serve as a gauge for post-operative loading to be considered when placing implant components

Analysis, Segmentation and Prediction of Knee Cartilage using Statistical Shape Models

Osteoarthritis (OA) of the knee is one of the leading causes of chronic disability (along with the hip). Due to rising healthcare costs associated with OA, it is important to fully understand the disease and how it progresses in the knee. One symptom of knee OA is the degeneration of cartilage in the articulating knee. The cartilage pad plays a major role in painting the biomechanical picture of the knee. This work attempts to quantify the cartilage thickness of healthy male and female knees using statistical shape models (SSMs) for a deep knee bend activity. Additionally, novel cartilage segmentation from magnetic resonance imaging (MRI) and estimation algorithms from computer tomography (CT) or x-rays are proposed to facilitate the efficient development and accurate analysis of future treatments related to the knee. Cartilage morphology results suggest distinct patterns of wear in varus, valgus, and neutral degenerative knees, and examination of contact regions during the deep knee bend activity further emphasizes these patterns. Segmentation results were achieved that were comparable if not of higher quality than existing state-of-the-art techniques for both femoral and tibial cartilage. Likewise, using the point correspondence properties of SSMs, estimation of articulating cartilage was effective in healthy and degenerative knees. In conclusion, this work provides novel, clinically relevant morphological data to compute segmentation and estimate new data in such a way to potentially contribute to improving results and efficiency in evaluation of the femorotibial cartilage layer

3D statistical shape models to embed spatial relationship information

This paper presents the creation of 3D statistical shape models of the knee bones and their use to embed information into a segmentation system for MRIs of the knee. We propose utilising the strong spatial relationship between the cartilages and the bones in the knee by embedding this information into the created models. This information can then be used to automate the initialisation of segmentation algorithms for the cartilages. The approach used to automatically generate the 3D statistical shape models of the bones is based on the point distribution model optimisation framework of Davies. Our implementation of this scheme uses a parameterized surface extraction algorithm, which is used as the basis for the optimisation scheme that automatically creates the 3D statistical shape models. The current approach is illustrated by generating 3D statistical shape models of the patella, tibia and femoral bones from a segmented database of the knee. The use of these models to embed spatial relationship information to aid in the automation of segmentation algorithms for the cartilages is then illustrated

The Probabilistic Active Shape Model: From Model Construction to Flexible Medical Image Segmentation

Automatic processing of three-dimensional image data acquired with computed tomography or magnetic resonance imaging plays an increasingly important role in medicine. For example, the automatic segmentation of anatomical structures in tomographic images allows to generate three-dimensional visualizations of a patient’s anatomy and thereby supports surgeons during planning of various kinds of surgeries. Because organs in medical images often exhibit a low contrast to adjacent structures, and because the image quality may be hampered by noise or other image acquisition artifacts, the development of segmentation algorithms that are both robust and accurate is very challenging. In order to increase the robustness, the use of model-based algorithms is mandatory, as for example algorithms that incorporate prior knowledge about an organ’s shape into the segmentation process. Recent research has proven that Statistical Shape Models are especially appropriate for robust medical image segmentation. In these models, the typical shape of an organ is learned from a set of training examples. However, Statistical Shape Models have two major disadvantages: The construction of the models is relatively difficult, and the models are often used too restrictively, such that the resulting segmentation does not delineate the organ exactly. This thesis addresses both problems: The first part of the thesis introduces new methods for establishing correspondence between training shapes, which is a necessary prerequisite for shape model learning. The developed methods include consistent parameterization algorithms for organs with spherical and genus 1 topology, as well as a nonrigid mesh registration algorithm for shapes with arbitrary topology. The second part of the thesis presents a new shape model-based segmentation algorithm that allows for an accurate delineation of organs. In contrast to existing approaches, it is possible to integrate not only linear shape models into the algorithm, but also nonlinear shape models, which allow for a more specific description of an organ’s shape variation. The proposed segmentation algorithm is evaluated in three applications to medical image data: Liver and vertebra segmentation in contrast-enhanced computed tomography scans, and prostate segmentation in magnetic resonance images