Topology-guided sampling of nonhomogeneous random processes

Topological measurements are increasingly being accepted as an important tool for quantifying complex structures. In many applications, these structures can be expressed as nodal domains of real-valued functions and are obtained only through experimental observation or numerical simulations. In both cases, the data on which the topological measurements are based are derived via some form of finite sampling or discretization. In this paper, we present a probabilistic approach to quantifying the number of components of generalized nodal domains of nonhomogeneous random processes on the real line via finite discretizations, that is, we consider excursion sets of a random process relative to a nonconstant deterministic threshold function. Our results furnish explicit probabilistic a priori bounds for the suitability of certain discretization sizes and also provide information for the choice of location of the sampling points in order to minimize the error probability. We illustrate our results for a variety of random processes, demonstrate how they can be used to sample the classical nodal domains of deterministic functions perturbed by additive noise and discuss their relation to the density of zeros.Comment: Published in at http://dx.doi.org/10.1214/09-AAP652 the Annals of Applied Probability (http://www.imstat.org/aap/) by the Institute of Mathematical Statistics (http://www.imstat.org

Collaboration in an Open Data eScience: A Case Study of Sloan Digital Sky Survey

Current science and technology has produced more and more publically accessible scientific data. However, little is known about how the open data trend impacts a scientific community, specifically in terms of its collaboration behaviors. This paper aims to enhance our understanding of the dynamics of scientific collaboration in the open data eScience environment via a case study of co-author networks of an active and highly cited open data project, called Sloan Digital Sky Survey. We visualized the co-authoring networks and measured their properties over time at three levels: author, institution, and country levels. We compared these measurements to a random network model and also compared results across the three levels. The study found that 1) the collaboration networks of the SDSS community transformed from random networks to small-world networks; 2) the number of author-level collaboration instances has not changed much over time, while the number of collaboration instances at the other two levels has increased over time; 3) pairwise institutional collaboration become common in recent years. The open data trend may have both positive and negative impacts on scientific collaboration.Comment: iConference 201

Structure-semantics interplay in complex networks and its effects on the predictability of similarity in texts

There are different ways to define similarity for grouping similar texts into clusters, as the concept of similarity may depend on the purpose of the task. For instance, in topic extraction similar texts mean those within the same semantic field, whereas in author recognition stylistic features should be considered. In this study, we introduce ways to classify texts employing concepts of complex networks, which may be able to capture syntactic, semantic and even pragmatic features. The interplay between the various metrics of the complex networks is analyzed with three applications, namely identification of machine translation (MT) systems, evaluation of quality of machine translated texts and authorship recognition. We shall show that topological features of the networks representing texts can enhance the ability to identify MT systems in particular cases. For evaluating the quality of MT texts, on the other hand, high correlation was obtained with methods capable of capturing the semantics. This was expected because the golden standards used are themselves based on word co-occurrence. Notwithstanding, the Katz similarity, which involves semantic and structure in the comparison of texts, achieved the highest correlation with the NIST measurement, indicating that in some cases the combination of both approaches can improve the ability to quantify quality in MT. In authorship recognition, again the topological features were relevant in some contexts, though for the books and authors analyzed good results were obtained with semantic features as well. Because hybrid approaches encompassing semantic and topological features have not been extensively used, we believe that the methodology proposed here may be useful to enhance text classification considerably, as it combines well-established strategies

Comparing the writing style of real and artificial papers

Recent years have witnessed the increase of competition in science. While promoting the quality of research in many cases, an intense competition among scientists can also trigger unethical scientific behaviors. To increase the total number of published papers, some authors even resort to software tools that are able to produce grammatical, but meaningless scientific manuscripts. Because automatically generated papers can be misunderstood as real papers, it becomes of paramount importance to develop means to identify these scientific frauds. In this paper, I devise a methodology to distinguish real manuscripts from those generated with SCIGen, an automatic paper generator. Upon modeling texts as complex networks (CN), it was possible to discriminate real from fake papers with at least 89\% of accuracy. A systematic analysis of features relevance revealed that the accessibility and betweenness were useful in particular cases, even though the relevance depended upon the dataset. The successful application of the methods described here show, as a proof of principle, that network features can be used to identify scientific gibberish papers. In addition, the CN-based approach can be combined in a straightforward fashion with traditional statistical language processing methods to improve the performance in identifying artificially generated papers.Comment: To appear in Scientometrics (2015

A complex network approach to stylometry

Statistical methods have been widely employed to study the fundamental properties of language. In recent years, methods from complex and dynamical systems proved useful to create several language models. Despite the large amount of studies devoted to represent texts with physical models, only a limited number of studies have shown how the properties of the underlying physical systems can be employed to improve the performance of natural language processing tasks. In this paper, I address this problem by devising complex networks methods that are able to improve the performance of current statistical methods. Using a fuzzy classification strategy, I show that the topological properties extracted from texts complement the traditional textual description. In several cases, the performance obtained with hybrid approaches outperformed the results obtained when only traditional or networked methods were used. Because the proposed model is generic, the framework devised here could be straightforwardly used to study similar textual applications where the topology plays a pivotal role in the description of the interacting agents.Comment: PLoS ONE, 2015 (to appear