Constrained speaker linking

In this paper we study speaker linking (a.k.a.\ partitioning) given constraints of the distribution of speaker identities over speech recordings. Specifically, we show that the intractable partitioning problem becomes tractable when the constraints pre-partition the data in smaller cliques with non-overlapping speakers. The surprisingly common case where speakers in telephone conversations are known, but the assignment of channels to identities is unspecified, is treated in a Bayesian way. We show that for the Dutch CGN database, where this channel assignment task is at hand, a lightweight speaker recognition system can quite effectively solve the channel assignment problem, with 93% of the cliques solved. We further show that the posterior distribution over channel assignment configurations is well calibrated.Comment: Submitted to Interspeech 2014, some typos fixe

On combinatorial optimisation in analysis of protein-protein interaction and protein folding networks

Abstract: Protein-protein interaction networks and protein folding networks represent prominent research topics at the intersection of bioinformatics and network science. In this paper, we present a study of these networks from combinatorial optimisation point of view. Using a combination of classical heuristics and stochastic optimisation techniques, we were able to identify several interesting combinatorial properties of biological networks of the COSIN project. We obtained optimal or near-optimal solutions to maximum clique and chromatic number problems for these networks. We also explore patterns of both non-overlapping and overlapping cliques in these networks. Optimal or near-optimal solutions to partitioning of these networks into non-overlapping cliques and to maximum independent set problem were discovered. Maximal cliques are explored by enumerative techniques. Domination in these networks is briefly studied, too. Applications and extensions of our findings are discussed

On a registration-based approach to sensor network localization

We consider a registration-based approach for localizing sensor networks from range measurements. This is based on the assumption that one can find overlapping cliques spanning the network. That is, for each sensor, one can identify geometric neighbors for which all inter-sensor ranges are known. Such cliques can be efficiently localized using multidimensional scaling. However, since each clique is localized in some local coordinate system, we are required to register them in a global coordinate system. In other words, our approach is based on transforming the localization problem into a problem of registration. In this context, the main contributions are as follows. First, we describe an efficient method for partitioning the network into overlapping cliques. Second, we study the problem of registering the localized cliques, and formulate a necessary rigidity condition for uniquely recovering the global sensor coordinates. In particular, we present a method for efficiently testing rigidity, and a proposal for augmenting the partitioned network to enforce rigidity. A recently proposed semidefinite relaxation of global registration is used for registering the cliques. We present simulation results on random and structured sensor networks to demonstrate that the proposed method compares favourably with state-of-the-art methods in terms of run-time, accuracy, and scalability

Partitioning networks into cliques: a randomized heuristic approach

In the context of community detection in social networks, the term community can be grounded in the strict way that simply everybody should know each other within the community. We consider the corresponding community detection problem. We search for a partitioning of a network into the minimum number of non-overlapping cliques, such that the cliques cover all vertices. This problem is called the clique covering problem (CCP) and is one of the classical NP-hard problems. For CCP, we propose a randomized heuristic approach. To construct a high quality solution to CCP, we present an iterated greedy (IG) algorithm. IG can also be combined with a heuristic used to determine how far the algorithm is from the optimum in the worst case. Randomized local search (RLS) for maximum independent set was proposed to find such a bound. The experimental results of IG and the bounds obtained by RLS indicate that IG is a very suitable technique for solving CCP in real-world graphs. In addition, we summarize our basic rigorous results, which were developed for analysis of IG and understanding of its behavior on several relevant graph classes

Robust Group Linkage

We study the problem of group linkage: linking records that refer to entities in the same group. Applications for group linkage include finding businesses in the same chain, finding conference attendees from the same affiliation, finding players from the same team, etc. Group linkage faces challenges not present for traditional record linkage. First, although different members in the same group can share some similar global values of an attribute, they represent different entities so can also have distinct local values for the same or different attributes, requiring a high tolerance for value diversity. Second, groups can be huge (with tens of thousands of records), requiring high scalability even after using good blocking strategies. We present a two-stage algorithm: the first stage identifies cores containing records that are very likely to belong to the same group, while being robust to possible erroneous values; the second stage collects strong evidence from the cores and leverages it for merging more records into the same group, while being tolerant to differences in local values of an attribute. Experimental results show the high effectiveness and efficiency of our algorithm on various real-world data sets

Every property is testable on a natural class of scale-free multigraphs

In this paper, we introduce a natural class of multigraphs called hierarchical-scale-free (HSF) multigraphs, and consider constant-time testability on the class. We show that a very wide subclass, specifically, that in which the power-law exponent is greater than two, of HSF is hyperfinite. Based on this result, an algorithm for a deterministic partitioning oracle can be constructed. We conclude by showing that every property is constant-time testable on the above subclass of HSF. This algorithm utilizes findings by Newman and Sohler of STOC'11. However, their algorithm is based on the bounded-degree model, while it is known that actual scale-free networks usually include hubs, which have a very large degree. HSF is based on scale-free properties and includes such hubs. This is the first universal result of constant-time testability on the general graph model, and it has the potential to be applicable on a very wide range of scale-free networks.Comment: 13 pages, one figure. Difference from ver. 1: Definitions of HSF and SF become more general. Typos were fixe