15,093 research outputs found
MRI Super-Resolution using Multi-Channel Total Variation
This paper presents a generative model for super-resolution in routine
clinical magnetic resonance images (MRI), of arbitrary orientation and
contrast. The model recasts the recovery of high resolution images as an
inverse problem, in which a forward model simulates the slice-select profile of
the MR scanner. The paper introduces a prior based on multi-channel total
variation for MRI super-resolution. Bias-variance trade-off is handled by
estimating hyper-parameters from the low resolution input scans. The model was
validated on a large database of brain images. The validation showed that the
model can improve brain segmentation, that it can recover anatomical
information between images of different MR contrasts, and that it generalises
well to the large variability present in MR images of different subjects. The
implementation is freely available at https://github.com/brudfors/spm_superre
GSplit LBI: Taming the Procedural Bias in Neuroimaging for Disease Prediction
In voxel-based neuroimage analysis, lesion features have been the main focus
in disease prediction due to their interpretability with respect to the related
diseases. However, we observe that there exists another type of features
introduced during the preprocessing steps and we call them "\textbf{Procedural
Bias}". Besides, such bias can be leveraged to improve classification accuracy.
Nevertheless, most existing models suffer from either under-fit without
considering procedural bias or poor interpretability without differentiating
such bias from lesion ones. In this paper, a novel dual-task algorithm namely
\emph{GSplit LBI} is proposed to resolve this problem. By introducing an
augmented variable enforced to be structural sparsity with a variable splitting
term, the estimators for prediction and selecting lesion features can be
optimized separately and mutually monitored by each other following an
iterative scheme. Empirical experiments have been evaluated on the Alzheimer's
Disease Neuroimaging Initiative\thinspace(ADNI) database. The advantage of
proposed model is verified by improved stability of selected lesion features
and better classification results.Comment: Conditional Accepted by Miccai,201
A Guide to the Zygotic Embryo Culture of Coconut Palms (Cocos nucifera L.)
Crop Production/Industries,
SPM: a history.
Karl Friston began the SPM project around 1991. The rest is history
Health care resouce use and stroke outcome
Background and Purpose: Outcome in patients hospitalized for acute stroke varies considerably between populations. Within the framework of the GAIN International trial, a large multicenter trial of a neuroprotective agent (gavestinel, glycine antagonist), stroke outcome in relation to health care resource use has been compared in a large number of countries, allowing for differences in case mix. Methods: This substudy includes 1,422 patients in 19 countries grouped into 10 regions. Data on prognostic variables on admission to hospital, resource use, and outcome were analyzed by regression models. Results: All results were adjusted for differences in prognostic factors on admission (NIH Stroke Scale, age, comorbidity). There were threefold variations in the average number of days in hospital/institutional care (from 20 to 60 days). The proportion of patients who met with professional rehabilitation staff also varied greatly. Three-month case fatality ranged from 11% to 28%, and mean Barthel ADL score at three months varied between 64 and 73. There was no relationship between health care resource use and outcome in terms of survival and ADL function at three months. The proportion of patients living at home at three months did not show any relationship to ADL function across countries. Conclusions: There are wide variations in health care resource use between countries, unexplained by differences in case mix. Across countries, there is no obvious relationship between resource use and clinical outcome after stroke. Differences in health care traditions (treatment pathways) and social We thank the coinvestigators and research staff at the participating centers for their support. Glaxo Wellcome sponsored the GAIN International trial, supported the present analyses and reviewed the final draft of the article
Joint Total Variation ESTATICS for Robust Multi-Parameter Mapping
Quantitative magnetic resonance imaging (qMRI) derives tissue-specific
parameters -- such as the apparent transverse relaxation rate R2*, the
longitudinal relaxation rate R1 and the magnetisation transfer saturation --
that can be compared across sites and scanners and carry important information
about the underlying microstructure. The multi-parameter mapping (MPM) protocol
takes advantage of multi-echo acquisitions with variable flip angles to extract
these parameters in a clinically acceptable scan time. In this context,
ESTATICS performs a joint loglinear fit of multiple echo series to extract R2*
and multiple extrapolated intercepts, thereby improving robustness to motion
and decreasing the variance of the estimators. In this paper, we extend this
model in two ways: (1) by introducing a joint total variation (JTV) prior on
the intercepts and decay, and (2) by deriving a nonlinear maximum \emph{a
posteriori} estimate. We evaluated the proposed algorithm by predicting
left-out echoes in a rich single-subject dataset. In this validation, we
outperformed other state-of-the-art methods and additionally showed that the
proposed approach greatly reduces the variance of the estimated maps, without
introducing bias.Comment: 11 pages, 2 figures, 1 table, conference paper, accepted at MICCAI
202
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