641 research outputs found

    Phosphoproteomic characterization of the signaling network resulting from activation of chemokine receptor CCR2

    Get PDF
    Leukocyte recruitment is a universal feature of tissue inflammation and regulated by the interactions of chemokines with their G protein-coupled receptors (GPCRs). Activation of CC chemokine receptor 2 (CCR2) by its cognate chemokine ligands, including CC chemokine ligand 2 (CCL2), plays a central role in recruitment of monocytes in several inflammatory diseases. In this study, we used phosphoproteomics to conduct an unbiased characterization of the signaling network resulting from CCL2 activation of CCR2. Using data-independent acquisition (DIA) MS analysis, we quantified both the proteome and phosphoproteome in FlpIn-HEK293T cells stably expressing CCR2 at six time points after activation with CCL2. Differential expression analysis identified 699 significantly regulated phosphorylation sites on 441 proteins. As expected, many of these proteins are known to participate in canonical signal transduction pathways and in the regulation of actin cytoskeleton dynamics, including numerous guanine nucleotide exchange factors (GEFs) and GTPase activating proteins (GAPs). Moreover, we identified regulated phosphorylation sites in numerous proteins that function in the nucleus, including several constituents of the nuclear pore complex. The results of this study provide an unprecedented level of detail of CCR2 signaling and identify potential targets for regulation of CCR2 function

    A survey on Data Extraction and Data Duplication Detection

    Get PDF
    Text mining, also known as Intelligent Text Analysis is an important research area. It is very difficult to focus on the most appropriate information due to the high dimensionality of data. Feature Extraction is one of the important techniques in data reduction to discover the most important features. Processing massive amount of data stored in a unstructured form is a challenging task. Several pre-processing methods and algorithms are needed to extract useful features from huge amount of data. Dealing with collection of text documents, it is also very important to filter out duplicate data. Once duplicates are deleted, it is recommended to replace the removed duplicates. This Paper review the literature on duplicate detection and data fusion (remov e and replace duplicates).The survey provides existing text mining techniques to extract relevant features, detect duplicates and to replace the duplicate data to get fine grained knowledge to the user

    Double Investment Technique of Hollow Bulb Denture Obturator Fabrication in a Completely Edentulous Patient

    Get PDF
    Introduction: Prosthodontic management of palatal defects has been employed for many years. Palatal defects of any extent cause multiple problems in speech, mastication and aesthetics. Obturator prosthesis for an edentulous patient is more critical in terms of its movements as there is no mechanical retention available. Obturators and facial prostheses are important not only for rehabilitation and aesthetics, but also in patient resocialisation. Maxillary defects are created by surgical treatments of benign or malignant neoplasms and by trauma, in which case, denture is supported only by the underlying residual ridge and the defect. This clinical report describes the rehabilitation of a maxillary resected patient with a single piece hollow bulb denture obturator fabricated by double investment technique. Materials & Methods: In this double investment technique of hollow bulb denture obturator fabrication two same size transposable flasks were used for flasking and curing of the prosthesis. Results: Hollow bulb denture obturator was obtained by this double investment technique. Conclusion:  Decreased weight of prosthesis positively affects retention leading to improved physiologic function, and it also does not cause excessive atrophy in muscle balance

    Ultrasound Based Method and Apparatus for Stone Detection and to Facilitate Clearance Thereof

    Get PDF
    Described herein are methods and apparatus for detecting stones by ultrasound, in which the ultrasound reflections from a stone are preferentially selected and accentuated relative to the ultrasound reflections from blood or tissue. Also described herein are methods and apparatus for applying pushing ultrasound to in vivo stones or other objects, to facilitate the removal of such in vivo objects

    Electron-phonon interaction contribution to the total energy of group IV semiconductor polymorphs: evaluation and implications

    Full text link
    In density functional theory (DFT) based total energy studies, the van der Waals (vdW) and zero-point vibrational energy (ZPVE) correction terms are included to obtain energy differences between polymorphs. We introduce a new correction term, due to electron-phonon interactions (EPI). We rely on Allen's general formalism, which goes beyond the Quasi-Harmonic Approximation (QHA), to include the free energy contributions due to quasiparticle interactions. We show that, for semiconductors and insulators, the EPI contributions to the free energies of electrons and phonons are constant terms. Using Allen's formalism in combination with the Allen-Heine theory for EPI corrections, we calculate the zero-point EPI corrections to the total energy for cubic and hexagonal polytypes of Carbon, Silicon and Silicon Carbide. The EPI corrections alter the energy differences between polytypes. In SiC polytypes, the EPI correction term is more sensitive to crystal structure than the vdW and ZPVE terms and is thus essential in determining their energy differences. It clearly establishes that the cubic SiC-3C is metastable and hexagonal SiC-4H is the stable polytype. Our results are consistent with the experimental results of Kleykamp. Our study enables the inclusion of EPI corrections as a separate term in the free energy expression. This opens the way to beyond the QHA by including the contribution of EPI on all thermodynamic properties.Comment: Submitted for publication. 32 pages and 2 figure
    corecore