Dynamic critical phenomena from spectral functions on the lattice

We investigate spectral functions in the vicinity of the critical temperature of a second-order phase transition. Since critical phenomena in quantum field theories are governed by classical dynamics, universal properties can be computed using real-time lattice simulations. For the example of a relativistic single-component scalar field theory in 2+1 dimensions, we compute the spectral function described by universal scaling functions and extract the dynamic critical exponent z. Together with exactly known static properties of this theory, we obtain a verification from first principles that the relativistic theory is well described by the dynamic universality class of relaxational models with conserved density (Model C).Comment: 18 pages, 6 figures, NPB version, minor change

Parametric forcing approach to rough-wall turbulent channel flow

The effects of rough surfaces on turbulent channel flow are modelled by an extra force term in the Navier–Stokes equations. This force term contains two parameters, related to the density and the height of the roughness elements, and a shape function, which regulates the influence of the force term with respect to the distance from the channel wall. This permits a more flexible specification of a rough surface than a single parameter such as the equivalent sand grain roughness. The effects of the roughness force term on turbulent channel flow have been investigated for a large number of parameter combinations and several shape functions by direct numerical simulations. It is possible to cover the full spectrum of rough flows ranging from hydraulically smooth through transitionally rough to fully rough cases. By using different parameter combinations and shape functions, it is possible to match the effects of different types of rough surfaces. Mean flow and standard turbulence statistics have been used to compare the results to recent experimental and numerical studies and a good qualitative agreement has been found. Outer scaling is preserved for the streamwise velocity for both the mean profile as well as its mean square fluctuations in all but extremely rough cases. The structure of the turbulent flow shows a trend towards more isotropic turbulent states within the roughness layer. In extremely rough cases, spanwise structures emerge near the wall and the turbulent state resembles a mixing layer. A direct comparison with the study of Ashrafian, Andersson & Manhart (Intl J. Heat Fluid Flow, vol. 25, 2004, pp. 373–383) shows a good quantitative agreement of the mean flow and Reynolds stresses everywhere except in the immediate vicinity of the rough wall. The proposed roughness force term may be of benefit as a wall model for direct and large-eddy numerical simulations in cases where the exact details of the flow over a rough wall can be neglecte

Hysteretic clustering in granular gas

Granular material is vibro-fluidized in N=2 and N=3 connected compartments, respectively. For sufficiently strong shaking the granular gas is equi-partitioned, but if the shaking intensity is lowered, the gas clusters in one compartment. The phase transition towards the clustered state is of 2nd order for N=2 and of 1st order for N=3. In particular, the latter is hysteretic. The experimental findings are accounted for within a dynamical model that exactly has the above properties

Theory of pressure acoustics with boundary layers and streaming in curved elastic cavities

The acoustic fields and streaming in a confined fluid depend strongly on the acoustic boundary layer forming near the wall. The width of this layer is typically much smaller than the bulk length scale set by the geometry or the acoustic wavelength, which makes direct numerical simulations challenging. Based on this separation in length scales, we extend the classical theory of pressure acoustics by deriving a boundary condition for the acoustic pressure that takes boundary-layer effects fully into account. Using the same length-scale separation for the steady second-order streaming, and combining it with time-averaged short-range products of first-order fields, we replace the usual limiting-velocity theory with an analytical slip-velocity condition on the long-range streaming field at the wall. The derived boundary conditions are valid for oscillating cavities of arbitrary shape and wall motion as long as the wall curvature and displacement amplitude are both sufficiently small. Finally, we validate our theory by comparison with direct numerical simulation in two examples of two-dimensional water-filled cavities: The well-studied rectangular cavity with prescribed wall actuation, and the more generic elliptical cavity embedded in an externally actuated rectangular elastic glass block.Comment: 18 pages, 5 figures, pdfLatex, RevTe

Analytic study of the three-urn model for separation of sand

We present an analytic study of the three-urn model for separation of sand. We solve analytically the master equation and the first-passage problem. We find that the stationary probability distribution obeys the detailed balance and is governed by the {\it free energy}. We find that the characteristic lifetime of a cluster diverges algebraically with exponent 1/3 at the limit of stability.Comment: 5pages, 4 figures include

Spacetime picture of baryon stopping in the color-glass condensate

McLerran LD, Schlichting S, Sen S. Spacetime picture of baryon stopping in the color-glass condensate. PHYSICAL REVIEW D. 2019;99(7): 074009.We discuss baryon stopping in the color glass condensate description of high energy scattering. We consider the scattering of a distribution of valence quarks on an ultrarelativistic sheet of colored charge. We compute the distribution of scattered quarks from a composite projectile, and calculate the baryon currents before and after the collisions and on an event by event basis. We obtain simple analytic estimates of the baryon number compression and rapidity shifts, which in the idealized case of plane wave scattering, produce results that agree with considerations of Anishetty-Koehler-McLerra

Atmospheres as windows into sub-Neptune interiors: coupled chemistry and structure of hydrogen-silane-water envelopes

Sub-Neptune exoplanets are commonly hypothesized to consist of a silicate-rich magma ocean topped by a hydrogen-rich atmosphere. Previous work studying the outgassing of silicate material has demonstrated that such atmosphere-interior interactions can affect the atmosphere's overall structure and extent. But these models only considered SiO in an atmosphere of hydrogen gas, without considering chemical reactions between them. Here we couple calculations of the chemical equilibrium between H, Si, and O species with an atmospheric structure model. We find that substantial amounts of silane, SiH$_4$, and water, H$_2$O, are produced by the interaction between the silicate-rich interior and hydrogen-rich atmosphere. These species extend high into the atmosphere, though their abundance is greatest at the hottest, deepest regions. For example, for a 4 $M_\oplus$ planet with an equilibrium temperature of 1000 K, a base temperature of 5000 K, and a 0.1 $M_\oplus$ hydrogen envelope, silicon species and water can comprise 30 percent of the atmosphere by number at the bottom of the atmosphere. Due to this abundance enhancement, we find that convection is inhibited at temperatures $\gtrsim 2500$ K. This temperature is lower, implying that the resultant non-convective region is thicker, than was found in previous models which did not account for atmospheric chemistry. Our findings show that significant endogenous water is produced by magma-hydrogen interactions alone, without the need to accrete ice-rich material. We discuss the observability of the signatures of atmosphere-interior interaction and directions for future work, including condensate lofting and more complex chemical networks.Comment: 13 pages, 12 figures, accepted for publication in MNRA

Aureochrome 1 illuminated: structural changes of a transcription factor probed by molecular spectroscopy.

Aureochrome 1 from Vaucheria frigida is a recently identified blue-light receptor that acts as a transcription factor. The protein comprises a photosensitive light-, oxygen- and voltage-sensitive (LOV) domain and a basic zipper (bZIP) domain that binds DNA rendering aureochrome 1 a prospective optogenetic tool. Here, we studied the photoreaction of full-length aureochrome 1 by molecular spectroscopy. The kinetics of the decay of the red-shifted triplet state and the blue-shifted signaling state were determined by time-resolved UV/Vis spectroscopy. It is shown that the presence of the bZIP domain further prolongs the lifetime of the LOV390 signaling state in comparison to the isolated LOV domain whereas bound DNA does not influence the photocycle kinetics. The light-dark Fourier transform infrared (FTIR) difference spectrum shows the characteristic features of the flavin mononucleotide chromophore except that the S-H stretching vibration of cysteine 254, which is involved in the formation of the thio-adduct state, is significantly shifted to lower frequencies compared to other LOV domains. The presence of the target DNA influences the light-induced FTIR difference spectrum of aureochrome 1. Vibrational bands that can be assigned to arginine and lysine side chains as well to the phosphate backbone, indicate crucial changes in interactions between transcription factor and DNA

Experimental and numerical investigations of flow structure and momentum transport in a turbulent buoyancy-driven flow inside a tilted tube.

Buoyancy-driven turbulent mixing of fluids of slightly different densities [At = Δρ/(2〈ρ〉) = 1.15×10−2] in a long circular tube tilted at an angle θ = 15° from the vertical is studied at the local scale, both experimentally from particle image velocimetry and laser induced fluorescence measurements in the vertical diametrical plane and numerically throughout the tube using direct numerical simulation. In a given cross section of the tube, the axial mean velocity and the mean concentration both vary linearly with the crosswise distance z from the tube axis in the central 70% of the diameter. A small crosswise velocity component is detected in the measurement plane and is found to result from a four-cell mean secondary flow associated with a nonzero streamwise component of the vorticity. In the central region of the tube cross section, the intensities of the three turbulent velocity fluctuations are found to be strongly different, that of the streamwise fluctuation being more than twice larger than that of the spanwise fluctuation which itself is about 50% larger than that of the crosswise fluctuation. This marked anisotropy indicates that the turbulent structure is close to that observed in homogeneous turbulent shear flows. Still in the central region, the turbulent shear stress dominates over the viscous stress and reaches a maximum on the tube axis. Its crosswise variation is approximately accounted for by a mixing length whose value is about one-tenth of the tube diameter. The momentum exchange in the core of the cross section takes place between its lower and higher density parts and there is no net momentum exchange between the core and the near-wall regions. A sizable part of this transfer is due both to the mean secondary flow and to the spanwise turbulent shear stress. Near-wall regions located beyond the location of the extrema of the axial velocity (|z|≳0.36 d) are dominated by viscous stresses which transfer momentum toward (from) the wall near the top (bottom) of the tube