52 research outputs found

    The cys-loop ligand-gated ion channel gene superfamily of the nematode, Caenorhabditis elegans

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    The nematode, Caenorhabditis elegans, possesses the most extensive known superfamily of cys-loop ligand-gated ion channels (cys-loop LGICs) consisting of 102 subunit-encoding genes. Less than half of these genes have been functionally characterised which include cation-permeable channels gated by acetylcholine (ACh) and γ-aminobutyric acid (GABA) as well as anion-selective channels gated by ACh, GABA, glutamate and serotonin. Following the guidelines set for genetic nomenclature for C. elegans, we have designated unnamed subunits as lgc genes (ligand-gated ion channels of the cys-loop superfamily). Phylogenetic analysis shows that several of these lgc subunits form distinct groups which may represent novel cys-loop LGIC subtypes

    Interaction effects on common measures of sensitivity:Choice of measure, type I error, and power

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    Here we use simulation to assess previously unaddressed problems in the assessment of statistical interactions in detection and recognition tasks. The proportion of hits and false-alarms made by an observer on such tasks is affected by both their sensitivity and bias, and numerous measures have been developed to separate out these two factors. Each of these measures makes different assumptions regarding the underlying process and different predictions as to how false-alarm and hit rates should covary. Previous simulations have shown that choice of an inappropriate measure can lead to inflated type I error rates, or reduced power, for main effects, provided there are differences in response bias between the conditions being compared. Interaction effects pose a particular problem in this context. We show that spurious interaction effects in analysis of variance can be produced, or true interactions missed, even in the absence of variation in bias. Additional simulations show that variation in bias complicates patterns of type I error and power further. This under-appreciated fact has the potential to greatly distort the assessment of interactions in detection and recognition experiments. We discuss steps researchers can take to mitigate their chances of making an error

    Differential Sex, Morphotype and Tissue Accumulation of Mercury in the Crab Carcinus maenas

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    Carcinus maenas is an invasive species of recognised economical and ecological importance in which mercury accumulation could be a pathway for bioamplification through food webs. Little information is available about differential accumulation between crab sexes and morphotypes. Taking this in mind, a set of different industrial discharge scenarios were investigated in 96-h laboratory experiments for assessing the accumulation of inorganic mercury from contaminated seawater into the tissues of C. maenas. Three groups of crabs (green males, green and red females) where exposed to 5, 50 and 250 μg Hg L −1. Differences among sexes, morphotypes and tissues were detected, depending on the mercury concentration. The muscle did not show differential accumulation between sexes or morphotypes. For mercury exposed crabs, the contaminant was accumulated preferably in the gills (more than 75%) while, in control experiments, it was in the internal organs, muscle and hepatopancreas, and gills corresponded to less than 31% of the total mercury quantified. The different tissue contamination seems dependent on the major pathway of exposure, diet or water. Mercury accumulation by the crab was a rapid process and could represent a risk for the environment only after 96 h. In a scenario of a discharge point of 250 μgL −1, all tissues of crabs exposed would attain a very close, or even exceed the threshold concentration value for human consumption (0.5 mg kg−1).The present work was supported by FCT (Fundação para a Ciência e Tecnologia) through a PhD grant awarded to Sónia Costa (SFRH/BD/31247/2006) and through the Research Project MERCOAST (PTDC/MAR/101906/ 2008). The authors are indebted to all colleagues who assisted in the field and laboratory work.publishe

    Longitudinal preventive-screening cutoffs for metabolic syndrome in adolescents.

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    OBJECTIVE: To detect metabolic risk factor cutoff points in adolescence for the diagnosis of metabolic syndrome that develops at the age of 17 years (MS17). DESIGN: This study adopted a 6-year design incorporating four data collection time points (TPs). Volunteers were assessed prospectively at the ages of 12, 13, 14 and 17. PARTICIPANTS: A total of 210, 204, 198 and 187 schoolchildren volunteered at the first (TP(1)=12 years old), second (TP2=13 years old), third (TP3=14 years old) and fourth (TP4=17 years old) data collection TP, respectively. MEASUREMENTS: At each data collection TP, anthropometrical, biological and lifestyle data were obtained. Identical protocols were used for each assessment conducted by the same trained investigators. RESULTS: A total of 12% of the participants were diagnosed with MS17, the majority of them being boys (P<0.05). The prevalence of the syndrome increased directly with the degree of obesity. Using body mass index (BMI), adiposity and/or aerobic fitness levels in both genders, MS17 could be correctly diagnosed as early as TP1. No such cutoff points were found for high-density lipoprotein cholesterol, triglycerides, blood pressure and fasting plasma glucose levels. CONCLUSION: With respect to the data presented, it has been established that the calculated longitudinal preventive-screening cutoffs allow successful diagnosis of metabolic syndrome in adolescents using BMI, adiposity or aerobic fitness levels in both sexes. Adoption of such pediatric guidelines may help mitigate future increase in the prevalence of metabolic syndrome
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