Effects of Fish Populations on Pacific Loon (Gavia pacifica) and Yellow-billed Loon (G. adamsii) Lake Occupancy and Chick Production in Northern Alaska

  Predator populations are vulnerable to changes in prey distribution or availability. With warming temperatures, lake ecosystems in the Arctic are predicted to change in terms of hydrologic flow, water levels, and connectivity with other lakes. We surveyed lakes in northern Alaska to understand how shifts in the distribution or availability of fish may affect the occupancy and breeding success of Pacific (Gavia pacifica) and Yellow-billed Loons (G. adamsii). We then modeled the influence of the presence and abundance of five fish species and the physical characteristics of lakes (e.g., hydrologic connectivity) on loon lake occupancy and chick production. The presence of Alaska blackfish (Dallia pectoralis) had a positive influence on Pacific Loon occupancy and chick production, which suggests that small-bodied fish species provide important prey for loon chicks. No characteristics of fish species abundance affected Yellow-billed Loon lake occupancy. Instead, Yellow-billed Loon occupancy was influenced by the physical characteristics of lakes that contribute to persistent fish populations, such as the size of the lake and the proportion of the lake that remained unfrozen over winter. Neither of these variables, however, influenced chick production. The probability of an unoccupied territory becoming occupied in a subsequent year by Yellow-billed Loons was low, and no loon chicks were successfully raised in territories that were previously unoccupied. In contrast, unoccupied territories had a much higher probability of becoming occupied by Pacific Loons, which suggests that Yellow-billed Loons have strict habitat requirements and suitable breeding lakes may be limited. Territories that were occupied had high probabilities of remaining occupied for both loon species.  Les populations de prédateurs sont vulnérables aux changements de répartition ou de disponibilité des proies. En raison du réchauffement des températures, on prévoit que les écosystèmes lacustres de l’Arctique changeront pour ce qui est du régime hydrologique, des niveaux d’eau et de la connectivité avec d’autres lacs. Nous avons examiné des lacs du nord de l’Alaska pour comprendre comment les changements en matière de répartition ou de disponibilité des poissons peuvent avoir des incidences sur le taux d’occupation et sur le succès de reproduction du huart du Pacifique (Gavia pacifica) et du huart à bec blanc (G. adamsii). Ensuite, nous avons modélisé l’influence de la présence et de l’abondance de cinq espèces de poissons de même que les caractéristiques physiques de lacs (comme la connectivité hydrologique) par rapport au taux d’occupation lacustre des huarts et à la production d’oisillons. La présence du dallia (Dallia pectoralis) avait une influence positive sur l’occupation et la production d’oisillons chez le huart du Pacifique, ce qui suggère que les espèces de poissons au petit corps constituent une proie importante pour les oisillons. Aucune caractéristique de l’abondance des espèces de poissons n’a eu d’influence sur l’occupation lacustre du huart à bec blanc. L’occupation du huart à bec blanc a plutôt été influencée par les caractéristiques physiques des lacs qui contribuent aux populations de poissons persistantes, comme la taille du lac et la proportion du lac qui ne gelait pas en hiver. Toutefois, aucune de ces variables n’a exercé d’influence sur la production d’oisillons. La probabilité qu’un territoire inoccupé devienne occupé par le huart au bec blanc au cours d’une année subséquente était faible, et aucun oisillon huart n’a été élevé avec succès dans des territoires d’oisillons anciennement inoccupés. En revanche, les territoires inoccupés avaient une beaucoup plus grande probabilité de devenir occupés par les huarts du Pacifique, ce qui suggère que les huarts à bec blanc ont des exigences strictes en matière d’habitat et que le nombre de lacs convenant à la reproduction risque d’être limité. Les territoires qui étaient occupés avaient de fortes probabilités de rester occupés par les deux espèces de huarts

Superconductivity in the New Platinum Germanides MPt4Ge12 (M = Rare-earth and Alkaline-earth Metals) with Filled Skutterudite Structure

New germanium-platinum compounds with the filled-skutterudite crystal structure were synthesized. The structure and composition were investigated by X-ray diffraction and microprobe analysis. Magnetic susceptibility, specific heat, and electrical resistivity measurements evidence superconductivity in LaPt4Ge12 and PrPt4Ge12 below 8.3K. The parameters of the normal and superconducting states were established. Strong coupling and a crystal electric field singlet groundstate is found for the Pr compound. Electronic structure calculations show a large density of states at the Fermi level. Similar behavior with lower T_c was observed for SrPt4Ge12 and BaPt4Ge12.Comment: RevTeX, 4 figures, submitted to Physical Review Letters July 12, 200

Concept for a Time-of-Flight Small Angle Neutron Scattering Instrument at the European Spallation Source

A new Small Angle Neutron Scattering instrument is proposed for the European Spallation Source. The pulsed source requires a time-of-flight analysis of the gathered neutrons at the detector. The optimal instrument length is found to be rather large, which allows for a polarizer and a versatile collimation. The polarizer allows for studying magnetic samples and incoherent background subtraction. The wide collimation will host VSANS and SESANS options that increase the resolution of the instrument towards um and tens of um, respectively. Two 1m2 area detectors will cover a large solid angle simultaneously. The expected gains for this new instrument will lie in the range between 20 and 36, depending on the assessment criteria, when compared to up-to-date reactor based instruments. This will open new perspectives for fast kinetics, weakly scattering samples, and multi-dimensional contrast variation studies.Comment: 18 pages, 10 figure

YBa2Cu3O7−δ films: Calculation of the thermal conductivity and phonon mean‐free path

We estimate the phonon mean‐free path (mfp) in YBa2Cu3O7−δ by performing a theoretical fitting procedure on bulk single‐crystal data. This analysis indicates that the mfps of the phonons that are most responsible for the transport of heat are much longer than would be predicted from kinetic theory. These values are incorporated into a recently proposed treatment of the size effect to provide an estimate of the thermal conductivity of YBa2Cu3O7−δ films.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/70503/2/JAPIAU-72-10-4788-1.pd

DNA methylation in interleukin-11 predicts clinical response to antidepressants in GENDEP

Transcriptional differences in interleukin-11 (IL11) after antidepressant treatment have been found to correspond to clinical response in major depressive disorder (MDD) patients. Expression differences were partly mediated by a single-nucleotide polymorphism (rs1126757), identified as a predictor of antidepressant response as part of a genome-wide association study. Here we attempt to identify whether DNA methylation, another baseline factor known to affect transcription factor binding, might also predict antidepressant response, using samples collected from the Genome-based Therapeutic Drugs for Depression project (GENDEP). DNA samples from 113 MDD individuals from the GENDEP project, who were treated with either escitalopram (n=80) or nortriptyline (n=33) for 12 weeks, were randomly selected. Percentage change in Montgomery-� sberg Depression Rating Scale scores between baseline and week 12 were utilized as our measure of antidepressant response. The Sequenom EpiTYPER platform was used to assess DNA methylation across the only CpG island located in the IL11 gene. Regression analyses were then used to explore the relationship between CpG unit methylation and antidepressant response. We identified a CpG unit predictor of general antidepressant response, a drug by CpG unit interaction predictor of response, and a CpG unit by rs1126757 interaction predictor of antidepressant response. The current study is the first to investigate the potential utility of pharmaco-epigenetic biomarkers for the prediction of antidepressant response. Our results suggest that DNA methylation in IL11 might be useful in identifying those patients likely to respond to antidepressants, and if so, the best drug suited to each individual

Superconductivity in novel Ge-based skutterudites: {Sr,Ba}Pt_4Ge_{12}

Combining experiments and ab initio models we report on $\rm SrPt_4Ge_{12}$ and $\rm BaPt_4Ge_{12}$ as members of a novel class of superconducting skutterudites, where Sr or Ba atoms stabilize a framework entirely formed by Ge-atoms. Below $T_c=5.35$ K, and 5.10 K for $\rm BaPt_4Ge_{12}$ and $\rm SrPt_4Ge_{12}$, respectively, electron-phonon coupled superconductivity emerges, ascribed to intrinsic features of the Pt-Ge framework, where Ge-$p$ states dominate the electronic structure at the Fermi energy.Comment: 4 pages, 4 figures, accepted for publication in PR

The impact of phenotypic and genetic heterogeneity on results of genome wide association studies of complex diseases

Phenotypic misclassification (between cases) has been shown to reduce the power to detect association in genetic studies. However, it is conceivable that complex traits are heterogeneous with respect to individual genetic susceptibility and disease pathophysiology, and that the effect of heterogeneity has a larger magnitude than the effect of phenotyping errors. Although an intuitively clear concept, the effect of heterogeneity on genetic studies of common diseases has received little attention. Here we investigate the impact of phenotypic and genetic heterogeneity on the statistical power of genome wide association studies (GWAS). We first performed a study of simulated genotypic and phenotypic data. Next, we analyzed the Wellcome Trust Case-Control Consortium (WTCCC) data for diabetes mellitus (DM) type 1 (T1D) and type 2 (T2D), using varying proportions of each type of diabetes in order to examine the impact of heterogeneity on the strength and statistical significance of association previously found in the WTCCC data. In both simulated and real data, heterogeneity (presence of "non-cases") reduced the statistical power to detect genetic association and greatly decreased the estimates of risk attributed to genetic variation. This finding was also supported by the analysis of loci validated in subsequent large-scale meta-analyses. For example, heterogeneity of 50% increases the required sample size by approximately three times. These results suggest that accurate phenotype delineation may be more important for detecting true genetic associations than increase in sample size

Interaction between the BDNF gene Val/66/Met polymorphism and morning cortisol levels as a predictor of depression in adult women.

BACKGROUND: Common genetic variants, such as the brain-derived neurotrophic factor (BDNF) Val/66/Met polymorphism (rs6265), are known to interact with environmental factors such as early adversity to increase the risk of subsequent major depression. Much less is known about how they interact with individual differences in cortisol, although these also represent a risk for major depression. AIMS: To determine whether this BDNF variant moderated the risk represented by higher levels of morning salivary cortisol in adult women. METHOD: We recruited 279 premenopausal women who were at high risk of major depressive disorder because of either negative self-evaluation, unsupportive core relationship or chronic subclinical symptoms of depression or anxiety. Morning salivary cortisol was measured daily for up to 10 days at entry. Participants were followed up for about 12 months by telephone calls at 3-4 monthly intervals. Major depression and severe life events were assessed through interviews at baseline and follow-up; DNA was obtained from the saliva. RESULTS: There were 53 onsets (19%) of depressive episodes during follow-up. There was a significant U-shaped relationship between adjusted morning cortisol levels at baseline and the probability of depression onset during follow-up. In total, 51% experienced at least one severe life event/difficulty, and this strongly predicted subsequent onsets of depressive episodes. The BDNF Val/66/Met genotype was not directly associated with onsets of depression or with cortisol levels, but there was significant interaction between Val/66/Met and cortisol: the association between baseline cortisol and depression was limited to those with the Val/66/Val variant. There was no interaction between life events and either this BDNF polymorphism or cortisol levels. CONCLUSIONS: Morning salivary cortisol interacts with the BDNF Val/66/Met polymorphism in predicting new depressive episodes. This paper adds to the evidence that single gene polymorphisms interact with endogenous factors to predict depression.This is the published version. It has been published by the Royal College of Psychiatrists in The British Journal of Psychiartry and can be found here: http://bjp.rcpsych.org/content/201/4/313.full.pdf+html. Information about the licence this work falls under can be found here: http://www.rcpsych.ac.uk/pdf/Wellcome%20Trust%20licence.pdf

Childhood maltreatment and the medical morbidity in bipolar disorder: a case-control study.

BACKGROUND: Childhood maltreatment (abuse and neglect) can have long-term deleterious consequences, including increased risk for medical and psychiatric illnesses, such as bipolar disorder in adulthood. Emerging evidence suggests that a history of childhood maltreatment is linked to the comorbidity between medical illnesses and mood disorders. However, existing studies on bipolar disorder have not yet explored the specific influence of child neglect and have not included comparisons with individuals without mood disorders (controls). This study aimed to extend the existing literature by examining the differential influence of child abuse and child neglect on medical morbidity in a sample of bipolar cases and controls. METHODS: The study included 72 participants with bipolar disorder and 354 psychiatrically healthy controls (average age of both groups was 48 years), who completed the Childhood Trauma Questionnaire, and were interviewed regarding various medical disorders. RESULTS: A history of any type of childhood maltreatment was significantly associated with a diagnosis of any medical illness (adjusted OR = 6.28, 95% confidence intervals 1.70-23.12, p = 0.006) and an increased number of medical illnesses (adjusted OR = 3.77, 95% confidence intervals 1.34-10.57, p = 0.012) among adults with bipolar disorder. Exposure to child abuse was more strongly associated with medical disorders than child neglect. No association between childhood maltreatment and medical morbidity was detected among controls. CONCLUSIONS: To summarise, individuals with bipolar disorder who reported experiencing maltreatment during childhood, especially abuse, were at increased risk of suffering from medical illnesses and warrant greater clinical attention.The bipolar case–control genetic association study was funded by an unrestricted grant from GlaxoSmithKline Research and Development. Funding for the depression case–control study was provided by the UK Medical Research Council (MRC; G0701420). The BADGE study was supported by an Interdisciplinary Ph.D. studentship from the UK Economic Social Research Council (ESRC) and MRC to Dr. Hosang. Prof. Uher is supported by the Canada Research Chairs program (http://www.chairs-chaires.gc.ca/him) and Dr. Fisher is supported by an MQ Fellows Award (MQ14F40). The sources of funding had no involvement in the study design, data collection or decision to submit for publication