Additional file 1: of EMSAR: estimation of transcript abundance from RNA-seq data by mappability-based segmentation and reclustering

Supplementary Material. (PDF 250 kb

Additional file 1: Figure S1. of Comprehensive analysis of promoter-proximal RNA polymerase II pausing across mammalian cell types

Measurement of pausing index (PI). Figure S2. Robustness of RNAP2 pausing calculations. Figure S3. Pausing across cell and tissue types. Figure S4. Correlation between pausing and promoter GC and CpG content Figure S5. Relationship between whole gene, TSSR, and gene body RNAP2 density and PI to gene expression for GM12878, H1, K562, IMR90, HUVEC, and HepG2 cells. Figure S6. Grouping paused and non-paused genes by mean population-wide expression shows no consistent expression level difference within quantile. Figure S7. Effect of extracellular stimuli on RNAP2 pausing. Figure S8. Relationship of gene expression to TSSR and gene body RNAP2 density and to PI. Figure S9. The inflection point does not appear to be driven by a limit to the level of initiating RNAP2. Figure S10. Nucleosome positioning and RNAP2 pausing. Figure S11. Chromatin features and RNAP2 pausing. (PDF 7287 kb

Additional file 4: Table S3. of Comprehensive analysis of promoter-proximal RNA polymerase II pausing across mammalian cell types

List of primers used in this study. (XLSX 10 kb

Additional file 3: Table S2. of Comprehensive analysis of promoter-proximal RNA polymerase II pausing across mammalian cell types

GO biological process enrichment analysis for the top and bottom 25 % of genes by PI for each cell type. (XLSX 23028 kb

Additional file 2: Table S1. of Comprehensive analysis of promoter-proximal RNA polymerase II pausing across mammalian cell types

Datasets used in this study. (XLSX 19 kb

Dog Therapy Utilization with Children Affected by Hyperactivity Syndrome

Title of Diploma Thesis: Dog therapy utilization with children affected by hyperactivity syndrome Aim of Diploma Thesis: Identify whether and how long the children with hyperactivity syndrome are able to calm down, work and relax during the dog therapy lesson. Methods: Research has been based on the structured monitoring of three children with hyperactivity syndrome. Reduction of motion fidget during the dog therapy lesson should proofpositive influence ofthe therapy. Monitoring was repeated to confirm long time effect ofthe therapy. Evaluation by observers has been based on five grades scale. For research has been used in children care reports persona! documents from pedagogic- psychology examination. Results: The assumption, that during dog therapy lesson are children with hyperactivity syndrome able to concentrate on their work longer time, is confirmed. It is possible to use dog therapy as a supporting curative method for children with hyperactivity syndrome. Key words: dog therapy, animal therapy, zoonoss, hyperactivity, Attention Deficit Hyperactivity Disorder, positionin