Silicon isotopes of deep sea sponges: New insights into biomineralisation and skeletal structure

The silicon isotopic composition (30Si) of deep sea sponges' skeletal element - spicules - reflects the silicic acid (DSi) concentration of their surrounding water and can be used as natural archives of bottom water nutrients. In order to reconstruct the past silica cycle robustly, it is essential to better constrain the mechanisms of biosilicification, which are not yet well understood. Here, we show that the apparent isotopic fractionation (30Si) during spicule formation in deep sea sponges from the equatorial Atlantic ranges from ĝ'6.74 ‰ to ĝ'1.50 ‰ in relatively low DSi concentrations (15 to 35 μM). The wide range in isotopic composition highlights the potential difference in silicification mechanism between the two major classes, Demospongiae and Hexactinellida. We find the anomalies in the isotopic fractionation correlate with skeletal morphology, whereby fused framework structures, characterised by secondary silicification, exhibit extremely light 30Si signatures compared with previous studies. Our results provide insight into the processes involved during silica deposition and indicate that reliable reconstructions of past DSi can only be obtained using silicon isotope ratios derived from sponges with certain spicule types. © Author(s) 2018.Acknowledgements. We acknowledge the science team and the crew of JC094 and Laura Robinson for cruise organisation. We would also like to thank Paul Curnow for constructive comments, Stuart Kearns for his SEM training and assistance, and Maria López-Acosta for her help. Finally, the funding from the Royal Society (grant code RG130386) and from the European Research Council is acknowledged. Joana R. Xavier received support from the European Union’s Horizon 2020 research and innovation program through the SponGES project (grant agreement no. 679849)

Benthic organic matter transformation drives pH and carbonate chemistry in Arctic marine sediments

Carbonate chemistry of the Arctic Ocean seafloor and its vulnerability to ocean acidification remains poorly explored. This limits our ability to quantify how biogeochemical processes and bottom water conditions shape sedimentary carbonate chemistry, and to predict how climate change may affect such biogeochemical processes at the Arctic Ocean seafloor. Here, we employ an integrated data-model assessment that explicitly resolves benthic pH and carbonate chemistry along a S—N transect in the Barents Sea. We identify the main drivers of observed carbonate dynamics and estimate benthic fluxes of dissolved inorganic carbon and alkalinity to the Arctic Ocean. We explore how bottom water conditions and in-situ organic matter degradation shape these processes and show that organic matter transformation strongly impacts pH and carbonate saturation (Ω) variations. Aerobic organic matter degradation drives a negative pH shift (pH 5 at around 10–25 cm, model simulations result in authigenic carbonate precipitation. Furthermore, benthic fluxes of dissolved inorganic carbon (12.5—59.5 µmol cm−2 yr−1) and alkalinity (11.3—63.2 µmol cm−2 yr−1) are 2—3-fold greater in the northern sites due to greater carbonate dissolution. Our assessment is of significant relevance to predict how changes in the Arctic Ocean may shift carbon burial and pH buffering into the next century

Coastal barium cycling at the West Antarctic Peninsula

Barium cycling in the ocean is associated with a number of processes, including the production and recycling of organic matter, freshwater fluxes, and phenomena that affect alkalinity. As a result, the biogeochemical cycle of barium offers insights into past and present oceanic conditions, with barium currently used in various forms as a palaeoproxy for components of organic and inorganic carbon storage, and as a quasi-conservative water mass tracer. However, the nature of the oceanic barium cycle is not fully understood, particularly in cases where multiple processes may be interacting simultaneously with the dissolved and particulate barium pools. This is particularly the case in coastal polar regions such as the West Antarctic Peninsula, where biological drawdown and remineralisation occur in tandem with sea ice formation and melting, glacial meltwater input, and potential fluxes from shelf sediments. Here, we use a high-precision dataset of dissolved barium (Bad) from a grid of stations adjacent to the West Antarctic Peninsula in conjunction with silicic acid (Si(OH)4), the oxygen isotope composition of water, and salinity measurements, to determine the relative control of various coastal processes on the barium cycle throughout the water column. There is a strong correlation between Bad and Si(OH)4 present in deeper samples, but nevertheless persists significantly in surface waters. This indicates that the link between biogenic opal and barium is not solely due to barite precipitation and dissolution at depth, but is supplemented by an association between Bad and diatom tests in surface waters, possibly due to barite formation within diatom-dominated phytodetritus present in the photic zone. Sea-ice meltwater appears to exert a significant secondary control on barium concentrations, likely due to non-conservative biotic or abiotic processes acting as a sink for Bad within the sea ice itself, or sea-ice meltwater stimulating non-siliceous productivity that acts as a Bad sink. Meteoric water input, conversely, exerts little or no control on local barium levels, indicating that glacial meltwater is not a significant coastal source of barium to the West Antarctic Peninsula shelf waters

A functional riboSNitch in the 3' untranslated region of FKBP5 alters MicroRNA-320a binding efficiency and mediates vulnerability to chronic post-traumatic pain

Previous studies have shown that common variants of the gene coding for FK506-binding protein 51 (FKBP5), a critical regulator of glucocorticoid sensitivity, affect vulnerability to stress-related disorders. In a previous report, FKBP5 rs1360780 was identified as a functional variant because of its effect on gene methylation. Here we report evidence for a novel functional FKBP5 allele, rs3800373. This study assessed the association between rs3800373 and post-traumatic chronic pain in 1607 women and men from two ethnically diverse human cohorts. The molecular mechanism through which rs3800373 affects adverse outcomes was established via in silico, in vivo, and in vitro analyses. The rs3800373 minor allele predicted worse adverse outcomes after trauma exposure, such that individuals with the minor (risk) allele developed more severe post-traumatic chronic musculoskeletal pain. Among these individuals, peritraumatic circulating FKBP5 expression levels increased as cortisol and glucocorticoid receptor (NR3C1) mRNA levels increased, consistent with increased glucocorticoid resistance. Bioinformatic, in vitro, and mutational analyses indicate that the rs3800373 minor allele reduces the binding of a stress-and pain-associated microRNA, miR-320a, to FKBP5 via altering the FKBP5 mRNA 3'UTR secondary structure (i.e., is a riboSNitch). This results in relatively greater FKBP5 translation, unchecked by miR-320a. Overall, these results identify an important gene–miRNA interaction influencing chronic pain risk in vulnerable individuals and suggest that exogenous methods to achieve targeted reduction in poststress FKBP5 mRNA expression may constitute useful therapeutic strategies

Silicon isotopes highlight the role of glaciated fjords in modifying coastal waters

Glaciers and ice sheets are experiencing rapid warming under current climatic change and there is increasing evidence that glacial meltwaters provide key dissolved and dissolvable amorphous nutrients to downstream ecosystems. However, large debate exists around the fate of these nutrients within complex and heterogenous fjord environments, where biogeochemical cycling is still often poorly understood. We combine silicon (Si) concentration data with isotopic compositions to better understand silicon cycling and export in two contrasting fjordic environments in south-west Greenland. We show that both fjords have isotopically light dissolved silicon (DSi) within surface waters, despite an apparently rapid biological drawdown of DSi with increasing salinity. We hypothesise that such observations cannot be explained by simple water mass mixing processes, and postulate that an isotopically light source of Si, most likely glacially-derived amorphous silica (ASi), is responsible for further modifying these coastal waters within the fjords and beyond. Fjord to coastal exchange is likely a relatively slow process (several months), and thus is less impacted by short-term (< seasonal) changes of glacial meltwater input into the fjord, which has implications when considering the role of glacial meltwaters on nutrient export beyond the shelf break. We highlight the need for isotopic studies combined with dissolved and particulate nutrient concentration analysis to provide a more detailed analysis into the biogeochemical cycles within these highly dynamic fjord environments

Microflares and the Statistics of X-ray Flares

This review surveys the statistics of solar X-ray flares, emphasising the new views that RHESSI has given us of the weaker events (the microflares). The new data reveal that these microflares strongly resemble more energetic events in most respects; they occur solely within active regions and exhibit high-temperature/nonthermal emissions in approximately the same proportion as major events. We discuss the distributions of flare parameters (e.g., peak flux) and how these parameters correlate, for instance via the Neupert effect. We also highlight the systematic biases involved in intercomparing data representing many decades of event magnitude. The intermittency of the flare/microflare occurrence, both in space and in time, argues that these discrete events do not explain general coronal heating, either in active regions or in the quiet Sun.Comment: To be published in Space Science Reviews (2011

Search for gravitational waves from Scorpius X-1 in the second Advanced LIGO observing run with an improved hidden Markov model

We present results from a semicoherent search for continuous gravitational waves from the low-mass x-ray binary Scorpius X-1, using a hidden Markov model (HMM) to track spin wandering. This search improves on previous HMM-based searches of LIGO data by using an improved frequency domain matched filter, the J-statistic, and by analyzing data from Advanced LIGO's second observing run. In the frequency range searched, from 60 to 650 Hz, we find no evidence of gravitational radiation. At 194.6 Hz, the most sensitive search frequency, we report an upper limit on gravitational wave strain (at 95% confidence) of h095%=3.47×10-25 when marginalizing over source inclination angle. This is the most sensitive search for Scorpius X-1, to date, that is specifically designed to be robust in the presence of spin wandering. © 2019 American Physical Society

Search for Tensor, Vector, and Scalar Polarizations in the Stochastic Gravitational-Wave Background

The detection of gravitational waves with Advanced LIGO and Advanced Virgo has enabled novel tests of general relativity, including direct study of the polarization of gravitational waves. While general relativity allows for only two tensor gravitational-wave polarizations, general metric theories can additionally predict two vector and two scalar polarizations. The polarization of gravitational waves is encoded in the spectral shape of the stochastic gravitational-wave background, formed by the superposition of cosmological and individually unresolved astrophysical sources. Using data recorded by Advanced LIGO during its first observing run, we search for a stochastic background of generically polarized gravitational waves. We find no evidence for a background of any polarization, and place the first direct bounds on the contributions of vector and scalar polarizations to the stochastic background. Under log-uniform priors for the energy in each polarization, we limit the energy densities of tensor, vector, and scalar modes at 95% credibility to Ω0T<5.58×10-8, Ω0V<6.35×10-8, and Ω0S<1.08×10-7 at a reference frequency f0=25 Hz. © 2018 American Physical Society

Erratum: "A Gravitational-wave Measurement of the Hubble Constant Following the Second Observing Run of Advanced LIGO and Virgo" (2021, ApJ, 909, 218)

[no abstract available

Search for Gravitational Waves Associated with Gamma-Ray Bursts Detected by Fermi and Swift during the LIGO-Virgo Run O3b

We search for gravitational-wave signals associated with gamma-ray bursts (GRBs) detected by the Fermi and Swift satellites during the second half of the third observing run of Advanced LIGO and Advanced Virgo (2019 November 1 15:00 UTC-2020 March 27 17:00 UTC). We conduct two independent searches: A generic gravitational-wave transients search to analyze 86 GRBs and an analysis to target binary mergers with at least one neutron star as short GRB progenitors for 17 events. We find no significant evidence for gravitational-wave signals associated with any of these GRBs. A weighted binomial test of the combined results finds no evidence for subthreshold gravitational-wave signals associated with this GRB ensemble either. We use several source types and signal morphologies during the searches, resulting in lower bounds on the estimated distance to each GRB. Finally, we constrain the population of low-luminosity short GRBs using results from the first to the third observing runs of Advanced LIGO and Advanced Virgo. The resulting population is in accordance with the local binary neutron star merger rate. © 2022. The Author(s). Published by the American Astronomical Society