Structural equation modelling analysis of evolutionary and ecological patterns in Australian Banksia

Evolutionary history of species, their geographic ranges, ecological ranges, genetic diversity, and resistance to pathogen infection, have been viewed as being mutually linked through a complex network of interactions. Previous studies have described simple correlations between pairs of these factors, while rarely separated the direct effects among multiple interacting factors. This study was to separate the effect of multiple interacting factors, to reveal the strength of the interactions among these factors, and to explore the mechanisms underlying the ecological and evolutionary processes shaping the geographic range, genetic diversity and fitness of species. I assembled comparative data on evolutionary history, geographic range, ecological range, genetic diversity, and resistance to pathogen infection for thirteen Banksia species from Australia. I used structural equation modelling to test multivariate hypotheses involving evolutionary history, geographic range, genetic diversity and fitness. Key results are: (1) Species with longer evolutionary times tend to occupy larger geographic ranges; (2) higher genetic diversity is directly associated with longer flowering duration in Banksia; and (3) species with higher genotypic diversity have higher level of resistance to infection caused by the pathogen Phytophthora cinnamomi, whereas heterozygosity has the opposite relationship with capacity of resistance to the infections caused by this pathogen

African geoxyles evolved in response to fire; frost came later

It has been proposed in separate studies that fire or frost were the critical selective agents in the evolution of subshrub geoxyles (SGs) in African subtropical grasslands. We attempt to resolve this controversy by examining the evolution of SGs among the entire genus Protea that is widespread throughout southern/central Africa. We show that SGs are not confined to grasslands but occur in a wide range of non-forest vegetation types, including mediterranean shrublands. SG proteas arose 1–11 million years ago but their multiple origins among other geoxyles, confounded by strong intraspecific variability among grassland species, makes it impossible to identify the ancestral growth form. We conclude that the evolutionary history of SG proteas has occurred under lightning-prone conditions that promoted fire and were essentially frost-free; exposure to frost has been limited to certain elevated locations in more recent times. This is supported by many SGs having pyrogenic flowering and lack of seed storage among grassland species

A 350-million-year legacy of fire adaptation among conifers

Current phylogenetic evidence shows that fire began shaping the evolution of land plants 125 Ma, although the fossil charcoal record indicates that fire has a much longer history (>350 Ma). Serotiny (on-plant seed storage) is generally accepted as an adaptation to fire among woody plants. We developed a conceptual model of the requirements for the evolution of serotiny, and propose that serotiny is only expressed in the presence of a woody rachis as supporting structure, compact scales covering seeds as protective structure, seed wing as dispersal structure, and crown fire as the agent of selection and mechanism for seed release. This model is strongly supported by empirical data for modern ecosystems. We reconstructed the evolutionary history of intrinsic structural states required for the expression of serotiny in conifers, and show that these were diagnostic for early ('transitional') conifers from 332 Ma (late-Carboniferous). We assessed the likely flammable characteristics of early conifers and found that scale-leaved conifers burn rapidly and with high intensity, supporting the idea that crown fire regimes may have dominated early conifer ecosystems. Synthesis. Coupled with strong evidence for frequent fire throughout the Permian-Carboniferous and fossil evidence for other fire-related traits, we conclude that many early conifers were serotinous in response to intense crown fires, indicating that fire may have had a major impact on the evolution of plant traits as far back as 350 Ma

Small-seeded Hakea species tolerate cotyledon loss better than large-seeded congeners.

Six Hakea species varying greatly in seed size were selected for cotyledon damage experiments. The growth of seedlings with cotyledons partially or completely removed was monitored over 90 days. All seedlings perished by the fifth week when both cotyledons were removed irrespective of seed size. Partial removal of cotyledons caused a significant delay in the emergence of the first leaf, and reduction in root and shoot growth of the large-seeded species. The growth of seedlings of small-seeded species was less impacted by cotyledon damage. The rate of survival, root and shoot lengths and dry biomass of the seedlings were determined after 90 days. When seedlings were treated with balanced nutrient solutions following removal of the cotyledons, survival was 95-98%, but 0% when supplied with nutrient solutions lacking N or P or with water only. The addition of a balanced nutrient solution failed to restore complete growth of any species, but the rate of root elongation for the small-seeded species was maintained. Cotyledons provide nutrients to support early growth of Hakea seedlings, but other physiological roles for the cotyledons are also implicated. In conclusion, small-seeded Hakea species can tolerate cotyledons loss better than large-seeded species

Contribution of transition and stabilization processes to speciation is a function of the ancestral trait state and selective environment in Hakea (Reprint)

Currently the origin and trajectories of novel traits are emphasised in evolutionary studies, the role of stabilization is neglected, and interpretations are often post hoc rather than as hypothesised responses to stated agents of selection. Here we evaluated the impact of changing environmental conditions on trait evolution and stabilization and their relative contribution to diversification in a prominent Australian genus, Hakea (Proteaceae). We assembled a time-based phylogeny for Hakea, reconstructed its ancestral traits for six attributes and determined their evolutionary trajectories in response to the advent or increasing presence of fire, seasonality, aridity, nectar-feeding birds and (in)vertebrate herbivores/granivores. The ancestral Hakea arose 18 million years ago (Ma) and was broad-leaved, non-spinescent, insect-pollinated, had medium-sized, serotinous fruits and resprouted after fire. Of the 190 diversification events that yielded the 82 extant species analysed, 850% involved evolution, stabilization or re-evolution (reversal) of individual novel traits. Needle leaves appeared 14 Ma and increased through the Neogene/Quaternary coinciding with intensifying seasonality and aridity. Spinescence arose 12 Ma consistent with the advent of vertebrate herbivores. Bird-pollination appeared 14 Ma in response to advent of the Meliphagidae in the early Miocene. Small and large woody fruits evolved from 12 Ma as alternative defenses against granivory. Fire-caused death evolved 14 Ma, accounting for 50% of subsequent events, as fire became less stochastic. Loss of serotiny began in the late Miocene as non-fireprone habitats became available but only contributed 8% of events. Innovation and subsequent stabilization of functional traits promoted the overall species diversification rate in Hakea by 15 times such that only three species now retain the ancestral phenotype. Our approach holds great promise for understanding the processes responsible for speciation of organisms when the ancestral condition can be identified and the likely selective agents are understood

Soil properties drive a negative correlation between species diversity and genetic diversity in a tropical seasonal rainforest

A negative species-genetic diversity correlation (SGDC) could be predicted by the niche variation hypothesis, whereby an increase in species diversity within community reduces the genetic diversity of the co-occurring species because of the reduction in average niche breadth; alternatively, competition could reduce effective population size and therefore genetic diversity of the species within community. We tested these predictions within a 20 ha tropical forest dynamics plot (FDP) in the Xishuangbanna tropical seasonal rainforest. We established 15 plots within the FDP and investigated the soil properties, tree diversity, and genetic diversity of a common tree species Beilschmiedia roxburghiana within each plot. We observed a significant negative correlation between tree diversity and the genetic diversity of B. roxburghiana within the communities. Using structural equation modeling, we further determined that the inter-plot environmental characteristics (soil pH and phosphorus availability) directly affected tree diversity and that the tree diversity within the community determined the genetic diversity of B. roxburghiana. Increased soil pH and phosphorus availability might promote the coexistence of more tree species within community and reduce genetic diversity of B. roxburghiana for the reduced average niche breadth; alternatively, competition could reduce effective population size and therefore genetic diversity of B. roxburghiana within community

Digital back-propagation in optical fiber communication systems considering equalization enhanced phase noise

The effect of equalization enhanced phase noise (EEPN) will be introduced in digital signal processing (DSP) based coherent optical communication systems. The EEPN will seriously degrade the transmission performance of a highcapacity optical transmission system. In this work, the influence of EEPN on the performance of dual-polarization 16-ary quadrature amplitude modulation (DP-16QAM) optical transmission system using the electrical dispersion compensation (EDC), the single-channel digital back-propagation (DBP), the partial-bandwidth DBP and the full-field DBP (FF-DBP) were comparatively evaluated with and without considering distortions from the EEPN. Deteriorations on achievable information rates (AIRs) and modulation error ratios (MERs) of optical communication systems due to EEPN have also been assessed. Numerical results indicate that the transmission performance of coherent optical systems can be significantly degraded by the EEPN, especially when FF-DBP is used for the nonlinearity compensation. The larger the linewidth of the local oscillator (LO) laser is, the more serious the degradation caused by EEPN is. This deterioration leads to a decrease in optimal launch powers, AIRs and MERs in the long-haul optical communication systems. In the DP-16QAM transmission system, because of the interference of the EEPN generated by the LO laser with a linewidth of 1 MHz, the degradations on the AIR and MER are 0.15 Tbit/s and 4.15 dB in the case of FF-DBP, respectively. It can also be concluded that, for coherent optical systems with long transmission distances and high symbol rates, the compensation bandwidth and the computational complexity of MC-DBP in the DSP module can be significantly reduced by using narrower-linewidth LO lasers