Standards and conventions for the Worldwide Port System (WPS) regional Integrated Cargo Database (ICDB)

This document, prepared for the Worldwide Port System (WPS) Regional Integrated Cargo Database (ICDB), provides standards and conventions for the screens developed using ORACLE`s SQL*Menu, SQL*Forms, and SQL*Reportwriter; for the ORACLE keys; and for commenting ORACLE code. It also covers standards for database system transfers. The results of adherence to these standards and conventions by all developers at both geographically separated development sites, Oak Ridge National Laboratory (ORNL) and The Military Traffic Management Command`s Eastern Area (EA), will be a consistent appearance of ICDB to users, code that is easily maintained, and a system that will be quicker to develop and integrate. This final report of the Standards and Conventions contains general guidelines to be followed for the development of the ICDB user interface screens. Though additional ICDB user interface screens are being developed both at ORNL and EA, and existing screens may have fields added to or deleted from them, the standards and conventions presented in this document should remain unchanged

EPIGENETIC ALTERATIONS ASSOCIATED WITH PREMATURE OVARIAN FAILURE

Background/Purpose: Premature ovarian failure (POF) affects 1% of women with a largely idiopathic and poorly understood etiology. The objective of this study was to identify specific epigenetic alterations by measuring DNA methylation of gene regulatory regions in women with POF vs. controls. Methods: Blood samples were collected from idiopathic POFpatients (Amenorrhea for at least 3 months and 2 serum FSH levels of > 40mIU/ml obtained > 1 month apart prior to age 40) and control women (CW) (healthy pregnancy after age 37 with out a pregnancy loss). Genomic DNA was extracted from EDTA anticoagulated blood and bisulfite converted for analysis using the Illumina Golden Gate Methylation Panel which measures DNA methylation at 1506 CpG sites in the promoter regions of 807 genes in 10 POF and 12 CW. Candidate genes with altered epigenetic marks between POF and CW at a nominal P-value < 0.05 were identified using a t-testcomparison within the Illumina bead studio software. Genes of interest were further analyzed for quantitative methylation at specific CpG sites using pyrosequencing in 30 POF and 30 CW. Results: Comparison of DNA methylation profiles of our initial POF and CW groups identified several genes with statistically significanthyper- or hypo- methylation in the POF group (P < 0.05), including the Androgen Receptor (AR)promoter region, which was significantly hypermethylated. To further validate these results, DNA methylation of the AR gene promoter was quantified bypryosequencing in a larger group of POF and CW. Pyrosequencing further confirmed a significantly higher DNA methylation of the AR promoter region inPOF vs. CW (P=0.007). Conclusions: This is a novel study identifying epigenetic alterations in POF. The hypermethylation of the AR gene in POF patients may cause decreased level of the AR in these women. This is especially interesting given a recent report of induced POF in AR deficient mice^1. Specific epigenetic markers, as identified by DNA methylation array profiling in blood, may serve as useful biomarkers for POF and other fertility disorders. However, it will need to be determined if these methylation changes are present prior to diagnosis, or are a consequence of menopause itself. Reference: 1.Hiroko S. et al. Premature ovarian failure in androgenreceptor deficient mice. PNAS;103:224-

Functional description for the Worldwide Port System (WPS) Regional Integrated Cargo Database (ICDB)

This Functional Description for the Worldwide Port System (WPS) Regional Integrated Cargo Database (ICDB) documents the purpose of and requirements for the ICDB in order to ensure a mutual understanding between the development group and the user group of the system. This Functional Description defines ICDB and provides a clear statement of the initial operational capability to be developed