Carcinoma of an unknown primary: are EGF receptor, Her-2/neu, and c-Kit tyrosine kinases potential targets for therapy?

Carcinomas of an unknown primary site (CUP) are heterogeneous tumours with a median survival of only 8 months. Tyrosine kinase inhibitors are promising new drugs. The aim of this study was to determine the expression of EGF-receptor, Her-2/neu, and c-Kit tyrosine kinases in CUP. Paraffin-embedded specimens were obtained from 54 patients with a CUP who were included in the GEFCAPI 01 randomised phase II trial. Immunohistochemistry was performed using the Dako autostainer with antibodies directed against HER-2/neu protein, EGFR protein, and c-Kit protein (CD117). EGFR expression was found in 36 out of 54 samples (66%). In contrast, Her-2/neu overexpression and c-Kit positivity were only detected in 4 and 10% of patients, respectively. No significant association was found between the expression of the tyrosine kinase receptors and prognosis. EGFR expression was significantly associated with response to cisplatin-based chemotherapy: the response rates were 50 and 22% in patients with EGFR-positive tumours and EGFR-negative tumours, respectively (P<0.05). This study shows that EGFR is frequently expressed in CUP. This finding may prompt clinical trials investigating EGFR inhibitors in this setting. In contrast, c-Kit expression and Her-2/neu overexpression occur infrequently in CUP. EGFR expression was correlated to tumour chemosensitivity

Robust estimation of bacterial cell count from optical density

Optical density (OD) is widely used to estimate the density of cells in liquid culture, but cannot be compared between instruments without a standardized calibration protocol and is challenging to relate to actual cell count. We address this with an interlaboratory study comparing three simple, low-cost, and highly accessible OD calibration protocols across 244 laboratories, applied to eight strains of constitutive GFP-expressing E. coli. Based on our results, we recommend calibrating OD to estimated cell count using serial dilution of silica microspheres, which produces highly precise calibration (95.5% of residuals &lt;1.2-fold), is easily assessed for quality control, also assesses instrument effective linear range, and can be combined with fluorescence calibration to obtain units of Molecules of Equivalent Fluorescein (MEFL) per cell, allowing direct comparison and data fusion with flow cytometry measurements: in our study, fluorescence per cell measurements showed only a 1.07-fold mean difference between plate reader and flow cytometry data

Black root rot: a long known but little understood disease

Table S1. Hosts reported to be susceptible to black root rot infection.Table S2. Variation in host susceptibility to black root rot infection by the fungus formally known as Thielaviopsis basicola.Black root rot caused by the pathogen Thielaviopsis basicola has been known since the mid 1800s. The disease is important on many agricultural and ornamental plant species and has been found in at least 31 countries. Since its description, the pathogen has had a complex taxonomic history that has resulted in a confused literature. A recent revision of the Ceratocystidaceae following the advent of DNA sequencing technology has made it possible to resolve this confusion. Importantly, it has also shown that there are two pathogens in the Ceratocystidaceae that cause black root rot. They reside in the newly established genus Berkeleyomyces and are now known as B. basicola and B. rouxiae. This review considers the taxonomic history of the black root rot pathogens, and their global distribution. Prospects relating to the serious diseases that they cause and the likely impact that the era of genomics will have on our understanding of the pathogens are also highlighted.The University of Pretoria, the members of Tree Protection Co‐operative Programme (TPCP), the DST‐NRF Centre of Excellence in Tree Health Biotechnology (CTHB) and the National Research Foundation.https://onlinelibrary.wiley.com/journal/136530592020-06-01hj2019BiochemistryForestry and Agricultural Biotechnology Institute (FABI)GeneticsMicrobiology and Plant Patholog

Bone marrow in Hodgkin lymphoma and mimickers.

the chapter describes the features of bone marrow involvement by Hodgkin lymphom