23 research outputs found
Nonlocal and local wind forcing dependence of the Atlantic meridional overturning circulation and its depth scale
We use wind sensitivity experiments to understand the wind forcing dependencies of the level of no motion and the e-folding pycnocline scale as well as their relationship to northward transport of the mid-depth Atlantic meridional overturning circulation (AMOC) south and north of the equator. In contrast to previous studies, we investigate the interplay of nonlocal and local wind effects on a decadal timescale. We use 30-year simulations with a high-resolution ocean general circulation model (OGCM) which is an eddy-resolving version of the Max Planck Institute Ocean Model (MPIOM). Our findings deviate from the common perspective that the AMOC is a nonlocal phenomenon only, because northward transport in the inter-hemispheric cell can only be understood by analyzing nonlocal Southern Ocean wind effects and local wind effects in the northern hemisphere downwelling region where Ekman pumping takes place. Southern Ocean wind forcing predominantly determines the magnitude of the pycnocline scale throughout the basin, whereas northern hemisphere winds additionally influence the level of no motion locally. In that respect, the level of no motion is a better proxy for northward transport and mid-depth velocity profiles despite the Ekman return flow which is found to be baroclinic. We compare our results inferred from the wind experiments and a 100-year global warming experiment in which the atmospheric CO2 concentration is quadrupled, using MPIOM coupled to an atmospheric model. We find that the evolution of the level of no motion in response to global warming represents changes in vertical velocity profiles or northward transport, whereas the changes of the pycnocline scale are opposite to the changes of the level of no motion over time. Using the level of no motion as depth scale, the analysis of the wind experiments and the warming experiment suggests a hemisphere-dependent scaling of the strength of AMOC. Furthermore, we put forward the idea that the ability of numerical models to capture the spatial and temporal variations of the level of no motion is crucial to reproduce the mid-depth cell in an appropriate wa
Prevalence and genetic diversity of Avipoxvirus in house sparrows in Spain
Avipoxvirus (APV) is a fairly common virus affecting birds that causes morbidity and mortality in wild and captive birds. We studied the prevalence of pox-like lesions and genetic diversity of APV in house sparrows (Passer domesticus) in natural, agricultural and urban areas in southern Spain in 2013 and 2014 and in central Spain for 8 months (2012±2013). Overall, 3.2% of 2,341 house sparrows visually examined in southern Spain had cutaneous lesions consistent with avian pox. A similar prevalence (3%) was found in 338 birds from central Spain. Prevalence was higher in hatch-year birds than in adults. We did not detect any clear spatial or temporal patterns of APV distribution. Molecular analyses of poxvirus-like lesions revealed that 63% of the samples were positive. Molecular and phylogenetic analyses of 29 DNA sequences from the fpv167 gene, detected two strains belonging to the canarypox clade (subclades B1 and B2) previously found in Spain. One of them appears predominant in Iberia and North Africa and shares 70% similarity to fowlpox and canarypox virus. This APV strain has been identified in a limited number of species in the Iberian Peninsula, Morocco and Hungary. The second one has a global distribution and has been found in numerous wild bird species around the world. To our knowledge, this represents the largest study of avian poxvirus disease in the broadly distributed house sparrow and strongly supports the findings that Avipox prevalence in this species in South and central Spain is moderate and the genetic diversity low.This study was funded by the Spanish Ministry of Science and Innovation (Project CGL2010-15734/BOS), the Spanish Ministry of
Economy and Competitiveness (Project CGL2013-41642-P/BOS) and the Innovation and Development Agency of Andalusia (Spain) (P11-RNM-7038). Grants were awarded to JMP (Juan de la Cierva- JCI-2012-11868) and MAJM (FPIBES-2011-047609), Spanish Ministry of Economy and Competitiveness; RAJW (CEI-PICATA2012), CEI Campus of International Excellence; MM (FPU12/0568), Spanish Ministry of Education, Culture and Sports. RAJW was supported by the Craaford Foundation (grant 20160971) during the
writing of this publication. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript
Emergence of a Novel Avian Pox Disease in British Tit Species
Avian pox is a viral disease with a wide host range. In Great Britain, avian pox in birds of the Paridae family was first diagnosed in a great tit (Parus major) from south-east England in 2006. An increasing number of avian pox incidents in Paridae have been reported each year since, indicative of an emergent infection. Here, we utilise a database of opportunistic reports of garden bird mortality and morbidity to analyse spatial and temporal patterns of suspected avian pox throughout Great Britain, 2006–2010. Reports of affected Paridae (211 incidents) outnumbered reports in non-Paridae (91 incidents). The majority (90%) of Paridae incidents involved great tits. Paridae pox incidents were more likely to involve multiple individuals (77.3%) than were incidents in non-Paridae hosts (31.9%). Unlike the small wart-like lesions usually seen in non-Paridae with avian pox in Great Britain, lesions in Paridae were frequently large, often with an ulcerated surface and caseous core. Spatial analyses revealed strong clustering of suspected avian pox incidents involving Paridae hosts, but only weak, inconsistent clustering of incidents involving non-Paridae hosts. There was no spatial association between Paridae and non-Paridae incidents. We documented significant spatial spread of Paridae pox from an origin in south-east England; no spatial spread was evident for non-Paridae pox. For both host clades, there was an annual peak of reports in August/September. Sequencing of the avian poxvirus 4b core protein produced an identical viral sequence from each of 20 great tits tested from Great Britain. This sequence was identical to that from great tits from central Europe and Scandinavia. In contrast, sequence variation was evident amongst virus tested from 17 non-Paridae hosts of 5 species. Our findings show Paridae pox to be an emerging infectious disease in wild birds in Great Britain, apparently originating from viral incursion from central Europe or Scandinavia
Differentiation of Avian Poxvirus Strains on the Basis of Nucleotide Sequences of 4b Gene Fragment
Investigations on aviadenoviruses isolated from turkey flocks in Germany
<p>During routine diagnosis in 2012, 69 samples of diseased turkey breeding and fattening flocks in Germany were examined for infection with aviadenoviruses by virus isolation using primary chicken embryo liver cells. In total, 21 aviadenovirus isolates, identified by a group-specific indirect immunofluorescence test, were obtained from 19 flocks. In almost all cases, molecular typing of these isolates based on partial hexon gene sequences revealed the presence of different types of turkey aviadenoviruses (TAdVs), including species <i>Turkey aviadenovirus B</i> (TAdV-B) with at least two different genotypes, as well as the species <i>Turkey aviadenovirus C</i> (TAdV-C) and <i>Turkey aviadenovirus D</i> (TAdV-D). Further analysis of DNA-dependent DNA polymerase gene sequences confirmed the classification of selected TAdV-C and TAdV-D isolates. Based on the results obtained for both genes, we suggest that TAdV-2, in addition to TAdV-4, belongs to the species TAdV-C. In contrast, amplification of the DNA polymerase gene fragment of nearly all investigated TAdV-B isolates failed due to unknown reasons. The results of sequence and phylogenetic analysis support the previously proposed classification of TAdVs into three different species and demonstrated how widely spread these viruses are in German turkey flocks. Analysis of case histories revealed a wide range of clinical and pathological changes; however an apparent link between types and disease conditions was not identified.</p