58 research outputs found
Optimization of the Observing Cadence for the Rubin Observatory Legacy Survey of Space and Time: A Pioneering Process of Community-focused Experimental Design
Vera C. Rubin Observatory is a ground-based astronomical facility under construction, a joint project of the National Science Foundation and the U.S. Department of Energy, designed to conduct a multipurpose 10 yr optical survey of the Southern Hemisphere sky: the Legacy Survey of Space and Time. Significant flexibility in survey strategy remains within the constraints imposed by the core science goals of probing dark energy and dark matter, cataloging the solar system, exploring the transient optical sky, and mapping the Milky Way. The survey's massive data throughput will be transformational for many other astrophysics domains and Rubin's data access policy sets the stage for a huge community of potential users. To ensure that the survey science potential is maximized while serving as broad a community as possible, Rubin Observatory has involved the scientific community at large in the process of setting and refining the details of the observing strategy. The motivation, history, and decision-making process of this strategy optimization are detailed in this paper, giving context to the science-driven proposals and recommendations for the survey strategy included in this Focus Issue
Genome-wide microRNA screening in Nile tilapia reveals pervasive isomiRsâ transcription, sex-biased arm switching and increasing complexity of expression throughout development
MicroRNAs (miRNAs) are key regulators of gene expression in multicellular organisms. The elucidation of miRNA function and evolution depends on the identification and characterization of miRNA repertoire of strategic organisms, as the fast-evolving cichlid fishes. Using RNA-seq and comparative genomics we carried out an in-depth report of miRNAs in Nile tilapia (Oreochromis niloticus), an emergent model organism to investigate evo-devo mechanisms. Five hundred known miRNAs and almost one hundred putative novel vertebrate miRNAs have been identified, many of which seem to be teleost-specific, cichlid-specific or tilapia-specific. Abundant miRNA isoforms (isomiRs) were identified with modifications in both 5p and 3p miRNA transcripts. Changes in arm usage (arm switching) of nine miRNAs were detected in early development, adult stage and even between male and female samples. We found an increasing complexity of miRNA expression during ontogenetic development, revealing a remarkable synchronism between the rate of new miRNAs recruitment and morphological changes. Overall, our results enlarge vertebrate miRNA collection and reveal a notable differential ratio of miRNA arms and isoforms influenced by sex and developmental life stage, providing a better picture of the evolutionary and spatiotemporal dynamics of miRNAs
Black hole spin: theory and observation
In the standard paradigm, astrophysical black holes can be described solely
by their mass and angular momentum - commonly referred to as `spin' - resulting
from the process of their birth and subsequent growth via accretion. Whilst the
mass has a standard Newtonian interpretation, the spin does not, with the
effect of non-zero spin leaving an indelible imprint on the space-time closest
to the black hole. As a consequence of relativistic frame-dragging, particle
orbits are affected both in terms of stability and precession, which impacts on
the emission characteristics of accreting black holes both stellar mass in
black hole binaries (BHBs) and supermassive in active galactic nuclei (AGN).
Over the last 30 years, techniques have been developed that take into account
these changes to estimate the spin which can then be used to understand the
birth and growth of black holes and potentially the powering of powerful jets.
In this chapter we provide a broad overview of both the theoretical effects of
spin, the means by which it can be estimated and the results of ongoing
campaigns.Comment: 55 pages, 5 figures. Published in: "Astrophysics of Black Holes -
From fundamental aspects to latest developments", Ed. Cosimo Bambi, Springer:
Astrophysics and Space Science Library. Additional corrections mad
isomiR-SEA: an RNA-Seq analysis tool for miRNAs/isomiRs expression level profiling and miRNA-mRNA interaction sites evaluation
The highly expressed 5âisomiR of hsa-miR-140-3p contributes to the tumor-suppressive effects of miR-140 by reducing breast cancer proliferation and migration
Comprehensive profiling of functional Epstein-Barr virus miRNA expression in human cell lines
Robust profiling of microRNAs and isomiRs in human plasma exosomes across 46 individuals
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