Hybrid datasets: integrating observations with experiments in the era of macroecology and big-data

Understanding how increasing human domination of the biosphere affects life on earth is a critical research challenge. This task is facilitated by the increasing availability of open-source data repositories, which allow ecologists to address scientific questions at unprecedented spatial and temporal scales. Large datasets are mostly observational, so they may have limited ability to uncover causal relations among variables. Experiments are better suited at attributing causation, but they are often limited in scope. We propose hybrid datasets, resulting from the integration of observational with experimental data, as an approach to leverage the scope and ability to attribute causality in ecological studies. We show how the analysis of hybrid datasets with emerging techniques in time series analysis (Convergent Cross Mapping) and macroecology (Joint Species Distribution Models) can generate novel insights into causal effects of abiotic and biotic processes that would be difficult to achieve otherwise. We illustrate these principles with two case-studies in marine ecosystems and discuss the potential to generalize across environments, species and ecological processes. If used wisely, the analysis of hybrid datasets may become the standard approach for research goals that seek causal explanations for large-scale ecological phenomena. This article is protected by copyright. All rights reserved

Propagules are not all equal: traits of vegetative fragments and disturbance regulate invasion success

Invasion success is regulated by multiple factors. While the roles of disturbance and propagule pressure in regulating the establishment of non-native species are widely acknowledged, that of propagule morphology (a proxy for quality) is poorly known. By means of a multi-factorial field experiment, we tested how the number (5 versus 10) and quality (intact, without fronds or without rhizoids) of fragments of the clonal invasive seaweed, Caulerpa cylindracea, influenced its ability to establish in patches of the native seagrass, Posidonia oceanica, exposed to different intensities of disturbance (0, 50 or 100% reduction in canopy cover). We hypothesized that the ability of fragments to establish would be greater for intact fragments (high quality) and reduced more by frond removal (low quality) than rhizoid removal (intermediate quality). At low propagule pressure or quality, fragment establishment was predicted to increase with increasing disturbance, whereas, at high propagule pressure or quality, it was predicted to be high regardless of disturbance intensity. Disturbance intensity, fragment number and quality had independent effects on C. cylindracea establishment success. Disturbance always facilitated fragment establishment. However, fragments retaining fronds, either intact or deprived of rhizoids, had higher establishment success than fragments deprived of fronds. Increasing propagule number had weak effects on the cover of C. cylindracea. Our results demonstrate that propagule traits enabling the acquisition of resources made available by disturbance can be more important than propagule number in determining the establishment and spread of clonal non-native plants. More generally, our study suggests that propagule quality is a key, yet underexplored, determinant of invasion success

Propagule composition regulates the success of an invasive seaweed across a heterogeneous seascape

Abstract Propagule pressure is acknowledged as a key determinant of invasion success. Nonetheless, the role of morphological or physiological attributes of propagules (i.e. their quality) in regulating invader establishment has been little explored. In particular, no study has investigated how the presence of propagules differing in quality within an inoculum influences establishment across heterogeneous landscapes. We experimentally tested the hypothesis that the quality (+Fronds+Rhizoids; +Fronds−Rhizoids; −Fronds+Rhizoids) and the diversity (1, 2 and 3 fragment types) of vegetative fragments of the seaweed Caulerpa taxifolia determine their establishment success across seascapes consisting of bare sediments and patches of the seagrass Zostera muelleri exposed to different disturbance intensities (control, seagrass canopy clipping and total removal). After 6 weeks, seaweed biomass, stolon and frond length, frond and rhizoid number were generally greater in unvegetated habitats (bare sediments and total seagrass removal) than full or reduced seagrass canopies. The type and the diversity of types of fragments inoculated had significant effects on the final biomass and morphological features of C. taxifolia only in vegetated habitats. In control plots, inocula of fragments retaining both fronds and rhizoids achieved higher biomass, developed longer stolons and more fronds. In canopy clipping plots, mixed inocula of +Fronds+Rhizoids and −Fronds+Rhizoids fragments had the greatest biomass and stolon length. Synthesis. Assessing how propagules differing in quality perform in different habitats might be not sufficient to draw a comprehensive picture of invasion risk, as their establishment can be modulated by both negative and positive interactions among them. Propagule composition should be, therefore, considered as a further dimension of propagule pressure. Our results also suggest that the relevance of specific propagule traits for invader establishment decreases from intact to degraded habitats. Considering propagule size in terms of amount of competent propagules, rather than an absolute measure, would refine our ability of predicting invasion risk across habitats differing in biotic or abiotic conditions

The role of environmental conditions in regulating long-term dynamics of an invasive seaweed

The mechanisms underpinning long-term dynamics and viability of invader populations in the receiving environment remain largely unknown. We tested the hypothesis that temporal variations in the abundance of a well-established invasive seaweed, Caulerpa cylindracea, in the NW Mediterranean, could be regulated by inter-annual fluctuations in environmental conditions. Abundance data of C. cylindracea, sampled repeatedly between 2005 and 2020 at the peak of its growing season (late summer/early fall), were related to interannual variations in seasonal seawater temperature, wind speed and rainfall recorded during different growth phases of the alga, in both subtidal and intertidal habitats. In both habitats, higher peak of C. cylindracea cover was associated with lower seawater temperature in spring and summer, when the seaweed exits the winter resting phase and starts a period of active growth. In addition, the peak abundance of subtidal C. cylindracea was positively associated with higher autumn wind speed intensity and spring daily total precipitation. Our study reveals the importance of seasonal and interannual variation of abiotic factors in shaping temporal patterns of abundance of C. cylindracea, in both subtidal and intertidal habitats. Identifying the factors underpinning invasive population temporal dynamics and viability is essential to predict the time and conditions under which an invader can thrive, and thus guide management strategies aimed to containing invasions under current and future climates

PM2.5 Size Distribution and Characterization by Carbon Isotope in Tuscany (Italy)

This study is focused on the numerical distribution and isotopic description of PM2.5 developed within the PATOS II (Particolato Atmosferico TOScana) regional project about the characterization and source apportionment of atmospheric aerosol (PM2.5) in Tuscany. PM isotopic analysis can play an important role in the individuation of primary and secondary sources and also in the determination of the natural/biogenic or anthropogenic/combustion contribution to the measured concentration. In addition, the PM2.5 particle number concentrations and the relative contribution of ultrafine particles are interpreted to identify the emission sources, the main atmospheric processes and the factors related with the dispersion of atmospheric pollutants. The analytical results in term of δ13C parameter show a greater variability in the urban and suburban background sites than in the urban traffic site, where the δ13C parameter does not vary significantly: this could be strictly correlated with traffic emissions and independently from the total particles number. On the contrary, urban and suburban background sites are affected by the meteorology and atmospheric processes. For this reason we can observe a wider variability in the δ13C values due to the contribution of different emissions sources. Despite all, in urban background we can observe lower δ13C values related with high number of total particles; this effect could be related with a traffic emission transport, because the δ13C parameter is similar to the δ13C value of urban traffic site

Color loci placemaking: The urban color between needs of continuity and renewal

The article presents the theoretical framework and the operational concepts of a research, finalized to explore and verify the prerequisites of an approach to urban color that, while recognizing to color the flexible as well as transient capacity to respond to the successive and multiple demands that characterize the urban space, sees a possible way of coexisting between the needs of continuity and renewal. Searching to understand the modalities and possibilities through which colour can intervene in the processes of transformation of the city to support both the needs of resignification and reappropriation and those of conservation and enhancement of the vital identity of each single place, the research looked on one side to the experiences gained within the colour plans and Lenclos' geography of colour and on the other side to the different and diversified experiences developed within the idea and practice of placemaking, aimed at the recognition and enhancement of the collective and plural creative dimension that colour seems effectively able to interpret. The term “color loci placemaking” was introduced to summarize this mode/possibility of understanding and approaching urban color, characterized especially by the attention for the specificity of each single place and the human factor underpinning place‐experience

Anthropogenic Disturbance Can Determine the Magnitude of Opportunistic Species Responses on Marine Urban Infrastructures

Background: Coastal landscapes are being transformed as a consequence of the increasing demand for infrastructures to sustain residential, commercial and tourist activities. Thus, intertidal and shallow marine habitats are largely being replaced by a variety of artificial substrata (e.g. breakwaters, seawalls, jetties). Understanding the ecological functioning of these artificial habitats is key to planning their design and management, in order to minimise their impacts and to improve their potential to contribute to marine biodiversity and ecosystem functioning. Nonetheless, little effort has been made to assess the role of human disturbances in shaping the structure of assemblages on marine artificial infrastructures. We tested the hypothesis that some negative impacts associated with the expansion of opportunistic and invasive species on urban infrastructures can be related to the severe human disturbances that are typical of these environments, such as those from maintenance and renovation works. Methodology/Principal Findings: Maintenance caused a marked decrease in the cover of dominant space occupiers, such as mussels and oysters, and a significant enhancement of opportunistic and invasive forms, such as biofilm and macroalgae. These effects were particularly pronounced on sheltered substrata compared to exposed substrata. Experimental application of the disturbance in winter reduced the magnitude of the impacts compared to application in spring or summer. We use these results to identify possible management strategies to inform the improvement of the ecological value of artificial marine infrastructures. Conclusions/Significance: We demonstrate that some of the impacts of globally expanding marine urban infrastructures, such as those related to the spread of opportunistic, and invasive species could be mitigated through ecologically-driven planning and management of long-term maintenance of these structures. Impact mitigation is a possible outcome of policies that consider the ecological features of built infrastructures and the fundamental value of controlling biodiversity in marine urban systems

Fingerprinting the origin of sheep milk products based on H-O-C-N isotopes

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Ecological impacts of invading seaweeds: A meta-analysis of their effects at different trophic levels

Aim Biological invasions are among the main threats to biodiversity. To promote a mechanistic understanding of the ecological impacts of non-native seaweeds, we assessed how effects on resident organisms vary according to their trophic level. Location Global. Methods We performed meta-analytical comparisons of the effects of non-native seaweeds on both individual species and communities. We compared the results of analyses performed on the whole dataset with those obtained from experimental data only and, when possible, between rocky and soft bottoms. Results Meta-analyses of data from 100 papers revealed consistent negative effects of non-native seaweeds across variables describing resident primary producer communities. In contrast, negative effects of seaweeds on consumers emerged only on their biomass and, limited to rocky bottoms, diversity. At the species level, negative effects were consistent across primary producers' response variables, while only the survival of consumers other than herbivores or predators (e.g. deposit/suspension feeders or detritivores) decreased due to invasion. Excluding mensurative data, negative effects of seaweeds persisted only on resident macroalgal communities and consumer species survival, while switched to positive on the diversity of rocky-bottom consumers. However, negative effects emerged for biomass and, in rocky habitats, density of consumers other than herbivores or predators. Main conclusions Our results support the hypothesis that seaweeds' effects on resident biodiversity are generally more negative within the same trophic level than on higher trophic guilds. Finer trophic grouping of resident organisms revealed more complex impacts than previously detected. High heterogeneity in the responses of some consumer guilds suggests that impacts of non-native seaweeds at higher trophic levels may be more invader- and species-specific than competitive effects at the same trophic level. Features of invaded habitats may further increase variability in seaweeds' impacts. More experimental data on consumers' response to invasion are needed to disentangle the effects of non-native seaweeds from those of other environmental stressors

Greening of grey infrastructure should not be used as a Trojan horse to facilitate coastal development

Climate change and coastal urbanization are driving the replacement of natural habitats with artificial structures and reclaimed land globally. These novel habitats are often poor surrogates for natural habitats. The application of integrated greening of grey infrastructure (IGGI) to artificial shorelines demonstrates how multifunctional structures can provide biodiversity benefits whilst simultaneously serving their primary engineering function. IGGI is being embraced globally, despite many knowledge gaps and limitations. It is a management tool to compensate anthropogenic impacts as part of the Mitigation Hierarchy. There is considerable scope for misuse and ‘greenwashing’ however, by making new developments appear more acceptable, thus facilitating the regulatory process. We encourage researchers to exercise caution when reporting on small-scale experimental trials. We advocate that greater attention is paid to when experiments ‘fail’ or yield unintended outcomes. We advise revisiting, repeating and expanding on experiments to test responses over broader spatio-temporal scales to improve the evidence base. Synthesis and applications. Where societal and economic demand makes development inevitable, particular attention should be paid to avoiding, minimizing and rehabilitating environmental impacts. Integrated greening of grey infrastructure (IGGI) should be implemented as partial compensation for environmental damage. Mutual benefits for both humans and nature can be achieved when IGGI is implemented retrospectively in previously developed or degraded environments. We caution, however, that any promise of net biodiversity gain from new developments should be scrutinized and any local ecological benefits set in the context of the wider environmental impacts. A ‘greened’ development will always impinge on natural systems, a reality that is much less recognized in the sea than on land.</p