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    ์—์ดํผํŠธ ์ฆํ›„๊ตฐ ๋ชจ๋ธ ๋งˆ์šฐ์Šค ์–ผ๊ตด ๊ธฐํ˜•์˜ 3์ฐจ์› ํ˜•ํƒœ ๋ถ„์„์„ ํ†ตํ•œ ๋ฐœ๋ณ‘ ๊ธฐ์ „ ๊ทœ๋ช… ๋ฐ ์น˜๋ฃŒ๋ฒ• ์ œ์‹œ

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    ํ•™์œ„๋…ผ๋ฌธ (๋ฐ•์‚ฌ) -- ์„œ์šธ๋Œ€ํ•™๊ต ๋Œ€ํ•™์› : ์น˜์˜ํ•™๋Œ€ํ•™์› ์น˜์˜๊ณผํ•™๊ณผ, 2021. 2. ๋ฅ˜ํ˜„๋ชจ.Apert syndrome, caused by activating mutation in the FGFR2 gene commonly presents craniosynostosis, midface hypoplasia and respiratory problems. Unfortunately, the pathological mechanism and intrinsic contributing factor still remain unclear, and there is no cure but serial surgical treatment in the earliest stage of the patientโ€™s life. In this study, we analyzed the causal factors of midface hypoplasia in Apert syndrome mouse model with three-dimensional morphometric analysis and histological assessment. Moreover, we suggested the therapeutic and surgical target for Apert syndrome treatment. We used Fgfr2S252W/+ mice as a mouse model of Apert syndrome. In part 1, we found the premature fusion of anterior facial bones is the main contributing factor toward the anterior-posterior skull length shortening. The facial anomalies are closely related to the abnormal cranial base growth, which could possibly induce the airway obstruction. The inhibition of Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (PIN1), a downstream signaling enzyme of FGF/FGFR signaling, via genetic knockdown or use of a PIN1 inhibitor, juglone, attenuated the facial deformities in mouse model. In part 2, we applied chondrocyte-specific Fgfr2S252W mutation in mice (Col2a1-cre; Fgfr2S252W/+) to examine the effect of cartilaginous component in the midface hypoplasia. These mice showed normal skull shape at birth, however, hypoplastic phenotypes were progressively evident. Especially, abnormal growth of nasal bone, vomer and ethmoid bone was notably presented, suggesting the involvement of altered nasal septal cartilage in the midface hypoplasia. Fgfr2S252W mutation on the septum chondrocytes accelerated hypertrophy and enlarged cellular size, finally, thickened and altered septal cartilage shape caused facial deformities. In this study, we provided the pathological mechanisms for midface hypoplasia in Apert syndrome by detailed three-dimensional morphometric and histological analysis. Furthermore, we suggested targeting PIN1 and surgical correction of abnormal nasal septal cartilage as a treatment strategy for Apert syndrome patients. We expect these multidimensional observations and analyses on the mouse model of Apert syndrome could help the patients with syndromic craniosynostosis to reduce the risk of surgical process and have better prognosis.์ฃผ๋กœ FGFR2 ๋Œ์—ฐ๋ณ€์ด์— ์˜ํ•œ FGF/FGFR ์‹ ํ˜ธ ์ฆ๊ฐ€๋กœ ์ธํ•ด ๋ฐœ์ƒํ•˜๋Š” ์—์ดํผํŠธ ์ฆํ›„๊ตฐ (Apert syndrome)์€ ๋Œ€ํ‘œ์ ์œผ๋กœ ๋‘๊ฐœ๊ณจ ์กฐ๊ธฐ ์œ ํ•ฉ์ฆ (craniosynostosis)๊ณผ ์ค‘์•ˆ๋ชจ ์ €์„ฑ์žฅ (midface hypoplasia), ๊ทธ๋กœ ์ธํ•œ ํ˜ธํก ๊ณค๋ž€ ๋“ฑ์˜ ์ฆ์ƒ์„ ๋‚˜ํƒ€๋‚ธ๋‹ค. ํ•˜์ง€๋งŒ ํ˜„์žฌ๋กœ์„œ๋Š” ์ค‘์•ˆ๋ชจ ์ €์„ฑ์žฅ์˜ ์ •ํ™•ํ•œ ๋ฐœ๋ณ‘ ๊ธฐ์ „์„ ์•Œ์ง€ ๋ชปํ•˜๋ฉฐ, ์–ด๋ฆฐ ์‹œ๊ธฐ๋ถ€ํ„ฐ ์—ฌ๋Ÿฌ ์ฐจ๋ก€์— ๊ฑธ์นœ ์ˆ˜์ˆ  ์ด์™ธ์—๋Š” ์น˜๋ฃŒ ๋ฐฉ๋ฒ•์ด ์—†๋Š” ์‹ค์ •์ด๋‹ค. ๋ณธ ์—ฐ๊ตฌ์—์„œ๋Š” ์—์ดํผํŠธ ์ฆํ›„๊ตฐ์˜ ๋งˆ์šฐ์Šค ๋ชจ๋ธ (Fgfr2S252W/+)์„ ์‚ฌ์šฉํ•˜์—ฌ, 3์ฐจ์› ํ˜•ํƒœ ๋ถ„์„๊ณผ ์กฐ์งํ•™์  ๋ถ„์„์„ ํ†ตํ•ด ์ค‘์•ˆ๋ชจ ์ €์„ฑ์žฅ์„ ์ผ์œผํ‚ค๋Š” ์ฃผ์š” ์›์ธ์„ ํŒŒ์•…ํ•˜๊ณ ์ž ํ•œ๋‹ค. ๋˜ํ•œ ์ฆ์ƒ์˜ ์˜ˆ๋ฐฉ๊ณผ ์น˜๋ฃŒ๋ฅผ ์œ„ํ•œ ์•ฝ๋ฌผ ํƒ€๊ฒŸ ๋ฐ ์ ์ ˆํ•œ ์ˆ˜์ˆ  ๋ฐฉ๋ฒ•์„ ์ œ์‹œํ•˜๊ณ ์ž ํ•œ๋‹ค. Part 1์—์„œ๋Š”, Micro-CT๋กœ ์ดฌ์˜ํ•œ ์—์ดํผํŠธ ๋งˆ์šฐ์Šค ๋‘๊ฐœ์•ˆ๋ฉด๋ถ€์˜ 3์ฐจ์›์  ํ˜•ํƒœ ๋ถ„์„์„ ํ†ตํ•ด, ์•ˆ๋ฉด๋ถ€๋ฅผ ๊ตฌ์„ฑํ•˜๋Š” ์—ฌ๋Ÿฌ ๋ด‰ํ•ฉ (suture)์˜ ์กฐ๊ธฐ ์œ ํ•ฉ์œผ๋กœ ์ธํ•œ ์•ˆ๋ฉด๋ถ€์˜ ๊ธธ์ด ๊ฐ์†Œ ๋ฐ ํ˜•ํƒœ ์ด์ƒ์ด ๊ฐ€์žฅ ๋‘๋“œ๋Ÿฌ์ง€๊ฒŒ ๋‚˜ํƒ€๋‚˜๋Š” ๊ฒƒ์„ ํ™•์ธํ•˜์˜€๋‹ค. ์ด๋Ÿฌํ•œ ํ˜•ํƒœ ๋ณ€ํ™”๋Š” ๋‘๊ฐœ์ € (cranial base)์˜ ํœ˜์–ด์ง ํ˜„์ƒ๊ณผ ๋ฐ€์ ‘ํ•˜๊ฒŒ ์—ฐ๊ด€๋˜์–ด ์žˆ์œผ๋ฉฐ, ์ด๋Š” ์—์ดํผํŠธ ์ฆํ›„๊ตฐ์—์„œ ๋‚˜ํƒ€๋‚˜๋Š” ํ˜ธํก ๋ฌธ์ œ๋ฅผ ์ง์ ‘์ ์œผ๋กœ ์•ผ๊ธฐํ•  ์ˆ˜ ์žˆ๋Š” ์š”์ธ์œผ๋กœ ์ƒ๊ฐ๋œ๋‹ค. ๋˜ํ•œ, FGF/FGFR ์‹ ํ˜ธ ์ „๋‹ฌ ํšจ์†Œ์ธ PIN1 (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1)์„ ์œ ์ „์  ๋˜๋Š” ์•ฝ๋ฌผํ•™์ ์œผ๋กœ ์–ต์ œํ•˜์—ฌ ์—์ดํผํŠธ ์ฆํ›„๊ตฐ ๋งˆ์šฐ์Šค ๋ชจ๋ธ์—์„œ ๋‚˜ํƒ€๋‚˜๋Š” ์ค‘์•ˆ๋ชจ ์ฆ์ƒ๋“ค์ด ํ˜ธ์ „๋˜๋Š” ๊ฒฐ๊ณผ๋ฅผ ํ™•์ธํ•˜์˜€๋‹ค. Part 2์—์„œ๋Š”, ์—ฐ๊ณจ ํŠน์ด์ ์œผ๋กœ FGFR2 ๋Œ์—ฐ๋ณ€์ด๋ฅผ ๋ฐœํ˜„ํ•˜๋Š” ๋งˆ์šฐ์Šค ๋ชจ๋ธ์„ ์‚ฌ์šฉํ•˜์—ฌ ์•ˆ๋ฉด๋ถ€๋ฅผ ๊ตฌ์„ฑํ•˜๋Š” ์—ฐ๊ณจ ์กฐ์ง์˜ ์„ฑ์žฅ ๋ณ€ํ™” ๋ฐ ์ค‘์•ˆ๋ชจ ๋ฐœ๋‹ฌ์— ๋ฏธ์น˜๋Š” ์˜ํ–ฅ์„ ์‚ดํŽด๋ณด๊ณ ์ž ํ•˜์˜€๋‹ค. ํ•ด๋‹น ๋งˆ์šฐ์Šค์—์„œ๋Š” ๊ด€์ƒ ๋ด‰ํ•ฉ (coronal suture) ๋ฐ ์•ˆ๋ฉด๋ถ€๋ฅผ ๊ตฌ์„ฑํ•˜๋Š” ๋ด‰ํ•ฉ์˜ ์กฐ๊ธฐ ์œ ํ•ฉ์ด ๋‚˜ํƒ€๋‚˜์ง€ ์•Š์•˜์ง€๋งŒ, ์—ฌ์ „ํžˆ ์ค‘์•ˆ๋ชจ ์„ฑ์žฅ ์ €ํ•˜ ์ฆ์ƒ์ด ๋‚˜ํƒ€๋‚ฌ๊ณ , ํŠนํžˆ, ๋น„๊ทผ์  (nasion)์ด ์œ„๋กœ ์†Ÿ์•„ ์˜ค๋ฅด๋Š” ํ˜„์ƒ, ์•ž์œ„ํ„ฑ๋ผˆ (premaxilla)์™€ ๋ณด์Šต๋ผˆ (vomer) ์‚ฌ์ด์˜ ์œ ํ•ฉ, ๋ฒŒ์ง‘๋ผˆ (ethmoid bone)์˜ ํ˜•์„ฑ ๊ฐ์†Œ, ์ฝ”๋ผˆ ํœ˜์–ด์ง ์ฆ์ƒ์ด ๋‘๋“œ๋Ÿฌ์ง€๊ฒŒ ๋‚˜ํƒ€๋‚ฌ๋‹ค. ํ•ด๋ถ€ํ•™์ ์œผ๋กœ ์ด๋“ค ๊ณจ ์กฐ์ง์€ ๋น„์ค‘๊ฒฉ ์—ฐ๊ณจ (nasal septal cartilage)์„ ์ค‘์‹ฌ์œผ๋กœ ์—ฐ๊ฒฐ๋˜์–ด ์žˆ๋Š”๋ฐ, ๋น„์ค‘๊ฒฉ ์—ฐ๊ณจ์˜ 3์ฐจ์› ํ˜•ํƒœํ•™์  ๋ถ„์„์„ ํ†ตํ•ด ์—ฐ๊ณจ์˜ ๋‘๊ป˜๊ฐ€ ๋‘๊บผ์›Œ์ง€๊ณ  ํ˜•ํƒœ๊ฐ€ ๋ณ€ํ˜•๋˜์–ด ๋น„์ค‘๊ฒฉ ๋งŒ๊ณก (septal deviation)์ด ๋‚˜ํƒ€๋‚˜๋Š” ๊ฒƒ์„ ํ™•์ธํ•˜์˜€๋‹ค. ์ด๋Ÿฌํ•œ ๋น„์ค‘๊ฒฉ ์—ฐ๊ณจ์˜ ๋‘๊ป˜ ๋ฐ ๋†’์ด ์ฆ๊ฐ€๋Š” ์—ฐ๊ณจ์„ ๊ตฌ์„ฑํ•˜๋Š” ์—ฐ๊ณจ ์„ธํฌ์˜ ๋น„๋Œ€ (hypertrophy) ์ฆ๊ฐ€๋กœ ์ธํ•œ ๊ฒƒ์œผ๋กœ ๋‚˜ํƒ€๋‚ฌ๋‹ค. ๊ฒฐ๊ณผ์ ์œผ๋กœ, FGFR2 ๋Œ์—ฐ๋ณ€์ด์— ์˜ํ•œ ๋น„์ค‘๊ฒฉ ์—ฐ๊ณจ์˜ ๋‘๊ป˜ ์ฆ๊ฐ€ ๋ฐ ํ˜•ํƒœ ๋ณ€ํ™”๋Š” ์•ˆ๋ฉด๋ถ€์˜ ์„ฑ์žฅ ์ €ํ•˜๋ฅผ ์ผ์œผํ‚ค๋Š” ์ค‘์‹ฌ์ ์ธ ์—ญํ• ์„ ํ•˜๋Š” ๊ฒƒ์œผ๋กœ ๋ณด์ธ๋‹ค. ๋ณธ ์—ฐ๊ตฌ์—์„œ๋Š” ๋‹ค๊ฐ์ ์ด๊ณ  ์ž์„ธํ•œ 3์ฐจ์› ํ˜•ํƒœ ๋ถ„์„์„ ํ†ตํ•ด ์—์ดํผํŠธ ์ฆํ›„๊ตฐ์˜ ๋งˆ์šฐ์Šค ๋ชจ๋ธ์—์„œ ๋‚˜ํƒ€๋‚˜๋Š” ์ค‘์•ˆ๋ชจ ์ €์„ฑ์žฅ์˜ ๋ฐœ๋ณ‘ ๊ธฐ์ „์„ ๋ถ„์„ํ•˜์˜€๋‹ค. ์ค‘์•ˆ๋ชจ ์ €์„ฑ์žฅ์˜ ์ฃผ์š” ์›์ธ์œผ๋กœ์จ, ์•ˆ๋ฉด์„ ๊ตฌ์„ฑํ•˜๋Š” ์—ฌ๋Ÿฌ ๋ด‰ํ•ฉ์˜ ์กฐ๊ธฐ ์œ ํ•ฉ๊ณผ ๋‘๊ฐœ์ €์˜ ํ˜•ํƒœ ๋ณ€ํ™”, ๊ทธ๋ฆฌ๊ณ  ๋น„์ค‘๊ฒฉ ์—ฐ๊ณจ ํ˜•ํƒœ ๋ณ€ํ™”๋ฅผ ์ œ์‹œํ•˜์˜€๊ณ , ์—์ดํผํŠธ ์ฆํ›„๊ตฐ์˜ ์ค‘์•ˆ๋ชจ ์„ฑ์žฅ ์ €ํ•˜ ์ˆ˜์ˆ  ๊ณผ์ •์—์„œ์˜ ์ ์ ˆํ•œ ์ˆ˜์ˆ  ๋ฐฉ๋ฒ• ์ „๋žต์„ ์ œ์‹œํ•  ์ˆ˜ ์žˆ์—ˆ๋‹ค. ๋”๋ถˆ์–ด, PIN1 ์–ต์ œ๋กœ ์ธํ•œ ์•ˆ๋ฉด๋ถ€ ๋ด‰ํ•ฉ์˜ ์กฐ๊ธฐ ์œ ํ•ฉ ์ฆ์ƒ ์™„ํ™” ํšจ๊ณผ๋ฅผ ๋ณด์—ฌ์คŒ์œผ๋กœ์จ ์—์ดํผํŠธ ์ฆํ›„๊ตฐ์˜ ์•ฝ๋ฌผ ์น˜๋ฃŒ ํƒ€๊ฒŸ์„ ์ œ์‹œํ•˜์˜€๋‹ค. ๋”ฐ๋ผ์„œ, ์—์ดํผํŠธ ์ฆํ›„๊ตฐ์—์„œ ๋‚˜ํƒ€๋‚˜๋Š” ์ฆ์ƒ๋“ค์„ ๋‹ค๋ฐฉ๋ฉด์œผ๋กœ ๋ถ„์„ํ•œ ๋ณธ ์—ฐ๊ตฌ์˜ ๊ฒฐ๊ณผ๊ฐ€ ์—์ดํผํŠธ ์ฆํ›„๊ตฐ์˜ ์ฆ์ƒ ์˜ˆ๋ฐฉ ๋ฐ ์™„ํ™”, ์ค‘์•ˆ๋ชจ ์„ฑ์žฅ ์ €ํ•˜์˜ ์ ์ ˆํ•œ ์น˜๋ฃŒ ๋ฐฉ๋ฒ•๊ณผ ์‹œ๊ธฐ๋ฅผ ๊ฒฐ์ •ํ•˜๋Š”๋ฐ ์‘์šฉ ๋  ์ˆ˜ ์žˆ์„ ๊ฒƒ์œผ๋กœ ๊ธฐ๋Œ€ํ•œ๋‹ค.I. Literature reveiw 1 II. Purpose of study 14 III. Part1. PIN1 attenuation improves midface hypoplasia in a mouse model of Apert syndrome 15 IV. Part2. Role of septal cartilage on midface hypoplasia of Apert syndrome 68 V. Conclusion 129 VI. References 130 VII. ๊ตญ๋ฌธ์ดˆ๋ก 145Docto

    ๋‚˜๋…ธ์ปจํŒŒ์ธ๋“œ ๋ฌผ์˜ ์œ ์ฒด ๋™์—ญํ•™์  ์„ฑ์งˆ

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    ํ•™์œ„๋…ผ๋ฌธ (๋ฐ•์‚ฌ)-- ์„œ์šธ๋Œ€ํ•™๊ต ๋Œ€ํ•™์› : ๋ฌผ๋ฆฌยท์ฒœ๋ฌธํ•™๋ถ€(๋ฌผ๋ฆฌํ•™์ „๊ณต), 2014. 2. ์ œ์›ํ˜ธ.Most of the nano-metric confined space is filled with liquid water called nanoconfined water in ambient condition, to say nothing of liquid water enviroment. The ubiquitous nanoconfined water naturally plays an important role for various mechanisms such as biological processes, swelling clays, colloidal interaction, and friction. In the 21st Century, the study of the nanoconfined water has begun in earnest due to the development of techniques to control stable nanoconfined space in ambient or liquid condition. Meanwhile reported properties of nanoconfiend water are summarized as follows. (i) enhanced viscosity 10^2~10^7 times larger compared with bulk water, (ii) sluggish relaxation time (10^-2 ~ 10^-9 s), (iii) nonlinear viscoelasticity, and (iv) violence of classic interfacial force. Although the various properties have been phenomenologically known, however, (1) the fundamental understanding of characteristics or the understanding of the relation between properties are still insufficient. And, (2) until now, the slow velocity (<~10^-6 m/s) experiments are performed only even though more fast-velocity friction frequently occurs in nature. In this study, (1) the unified stress tensor of nanoconfined hydration water layer (HWL), which shows the relation between characteristics of HWL and leads the other physical quantities by relation between tapping and shear properties, is introduced and demonstrated using quartz tuning fork based atomic force microscopy (QTF-AFM). And, (2) through fast velocity ( ~1 mm/s) experiments, the nanoscale elastic turbulence, which is marvelous phenomenon since it is impossible in Newtonian flow, is observed. Moreover the autoregulation in capillary, which is phenomenon that blood flow velocity is maintained automatically despite of a blood pressure change, may be understood through the nanoscale elastic turbulence between red blood cell and capillary wall. The study about unified stress tensor would contribute not alone nanoconfined water but methodology of various viscoelastic material studies. And elastic turbulence in nanoconfined water would be considered in various fields where nanoconfiend water exists. In particular, the physical understainding of autoregulation in capillary is anticipated to expand understanding of brain science such as cerebral infarction or Alzheimer's disease.Contents Abstract i List of Figures v Chapter 1 Introduction 1 Chapter 2 QTF-AFM 9 2.1 Quartz tunning fork (QTF) . . . . . . . . . . . . . . . . . . . . 9 2.2 QTF based Amplitude Modulation Atomic Force Microscopy (AM-AFM) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12 Chapter 3 Mechanical Characteristics of Confined Hydration Water Layer 20 3.1 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 20 3.2 Development of Hydration Stress Tensor . . . . . . . . . . . . . 24 3.3 Validity of Hydration Stress Tensor using QTF-AFM . . . . . . 30 3.4 Conclusion . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 34 iii Chapter 4 Nanoscale Turbulence in Confined HWL 39 4.1 Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 39 4.2 Nonlinear Dynamics of HWL . . . . . . . . . . . . . . . . . . . . 42 4.3 Reynolds and Weissenberg number . . . . . . . . . . . . . . . . 47 4.4 Viscoelastic Model . . . . . . . . . . . . . . . . . . . . . . . . . 49 4.4.1 Linear Maxwell model . . . . . . . . . . . . . . . . . . . . 49 4.4.2 Nonlinear Maxwell model . . . . . . . . . . . . . . . . . . 50 4.5 Elastic Turbulence in Nonlinear Maxwell Model . . . . . . . . . 54 4.5.1 Additive Stress via Correlation between Fluctuations . . 54 4.5.2 Scaling of Additive Stress . . . . . . . . . . . . . . . . . 55 4.6 Fluidity of Confined HWL . . . . . . . . . . . . . . . . . . . . . 58 4.7 Understanding of Autoregulation in capillary via ET . . . . . . 60 4.8 Conclusion . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 63 Chapter 5 Conclusions 67 ] 70Docto

    Regional Connectivity Changes According to Seizure Outcome of Temporal Epilepsy Surgery- A Magnetoencephalography Study

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    Objective: Temporal lobectomy is often successful in treatment of patients with medically intractable temporal lobe epilepsy (TLE), but prediction of its long-term outcome is of great interest. Here, we investigated usefulness of comparison analysis of pre- and post-surgical magnetoencephalopgrahy data in predicting prognosis of temporal lobectomy. Methods: The authors retrospectively analyzed pre-and post-operative MEG and presence of any seizures after temporal lobectomy in 8 patients with TLE. Spectral powers averaged from spike-free epochs in each condition (pre- and post-operation) were compared between 4 patients free from seizures and the other 4 with recurrent seizures. We also performed connectivity analysis based on phase locking values (PLVs) around resection margins of possible epileptogenic focus as regions of interest. Results: Spectral analysis on peri-lesional areas demonstrated relative increase of delta power in the patients without seizure freedom. On connectivity analysis, decrease of PLVs between other areas and temporal lobe focus after surgery were noted in patients with good surgical outcome while persistence or increase were found in patients with recurred seizures. Conclusion: This pilot study on comparison of power spectrum and connectivity metrics between pre- and post-op MEG exhibits a potential for predicting seizure outcome after TLE surgery.ope

    Non-invasively enhanced intracranial transplantation of mesenchymal stem cells using focused ultrasound mediated by overexpression of cell-adhesion molecules

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    Although there have been reports of promising results regarding the transplantation of mesenchymal stem cells (MSCs) for neurodegenerative diseases through the use of neuronal differentiation or control of the microenvironment, traditional surgical transplantation methods like parenchymal or intravenous injection have limitations such as secondary injuries in the brain, infection, and low survival rate of stem cells in the target site. Focused ultrasound (FUS) treatment is an emerging modality for the treatment of brain diseases, including neurodegenerative disorders. The various biological effects of FUS treatment have been investigated; therefore, the goal is now to improve the delivery efficiency and function of MSCs by capitalizing on the advantages of FUS. In this study, we demonstrated that FUS increases MSC transplantation into brain tissue by >2-fold, and that this finding might be related to the activation of intercellular adhesion molecule-1 in endothelial and subendothelial cells and vascular adhesion molecule-1 in endothelial cells.ope

    Analytical Tools and Databases for Metagenomics in the Next-Generation Sequencing Era

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    Metagenomics has become one of the indispensable tools in microbial ecology for the last few decades, and a new revolution in metagenomic studies is now about to begin, with the help of recent advances of sequencing techniques. The massive data production and substantial cost reduction in next-generation sequencing have led to the rapid growth of metagenomic research both quantitatively and qualitatively. It is evident that metagenomics will be a standard tool for studying the diversity and function of microbes in the near future, as fingerprinting methods did previously. As the speed of data accumulation is accelerating, bioinformatic tools and associated databases for handling those datasets have become more urgent and necessary. To facilitate the bioinformatics analysis of metagenomic data, we review some recent tools and databases that are used widely in this field and give insights into the current challenges and future of metagenomics from a bioinformatics perspective.

    Development of Time Varying Kalman Smoother for Extracting Fetal ECG using Independent Component Analysis : Preliminary Study

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    Fetal heart rate monitoring is important information to assess fetal well-being. Non-invasive fetal ECG (electrocardiography) can be derived from maternal abdominal signal. And various promising signal processing methods have been introduced to extract fetal ECG from motherโ€™s composite abdominal signal. However, non-invasive fetal ECG monitoring still has not been widely used in clinical practice due to insufficient reliable measurement and difficulty of signal processing. In application of signal processing method to extract fetal ECG, it might be lower signal to noise ratio due to time varying white Gaussian noise. In this paper, time varying Kalman smoother is proposed to remove white noise in fetal ECG and its feasibility is confirmed. Wiener process was set as Kalman system model and covariance matrix was modified according to white Gaussian noise level. Modified error covariance matrix changed Kalman gain and degree of smoothness. Optimal covariance matrix according to various amplitude in Gaussian white noise was extracted by 5 channel fetal ECG model, and feasibility of proposed method could be confirmed.ope

    Molecular ecology of prokaryotic community in Korean tidal flat

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    Thesis(doctor`s)--์„œ์šธ๋Œ€ํ•™๊ต ๋Œ€ํ•™์› :์ƒ๋ช…๊ณผํ•™๋ถ€,2007.Docto

    ์„œ์šธ ๏ง„ๅฑฑ์˜ ๆ™ฏ่ง€่ฎŠๅŒ–์— ๊ด€ํ•œ ็ก็ฉถ : ๆœ้ฎฎๅพŒๆœŸ๋ถ€ํ„ฐ ๆ—ฅๅธๆ™‚ไปฃ๊นŒ์ง€

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    ํ•™์œ„๋…ผ๋ฌธ(์„์‚ฌ)--์„œ์šธ๋Œ€ํ•™๊ต ๋Œ€ํ•™์› :์‚ฌํšŒ๊ต์œก๊ณผ ์ง€๋ฆฌ์ „๊ณต,2002.Maste

    (Die)Kausalitat von der Beihilfe

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    ํ•™์œ„๋…ผ๋ฌธ(๋ฐ•์‚ฌ)--์„œ์šธ๋Œ€ํ•™๊ต ๋Œ€ํ•™์› :๋ฒ•ํ•™๊ณผ,2008.2.Docto
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