Across-Line SNP Association Study for Direct and Associative Effects on Feather Damage in Laying Hens

An association study between SNP markers and feather condition score on the back, rump and belly of laying hens was performed. Feather condition score is a measure of feather damage, which has been shown to be closely related to feather pecking behaviour in hens housed in groups. A population of 662 hens was genotyped for 1536 SNPs of which 1022 could be used for the association study. The analysis was conducted across 9 different lines of White Leghorn and Rhode Island Red origin. Across lines linkage disequilibrium is conserved at shorter distances than within lines; therefore, SNPs significantly associated with feather condition score across lines are expected to be closer to the functional mutations. The SNPs that had a significant across-line effect but did not show significant SNP-by-line interaction were identified, to test that the association was consistent across lines. Both the direct effect of the individual’s genotype on its plumage condition, and the associative effect of the genotype of the cage mates on the individual’s plumage condition were analysed. The direct genetic effect can be considered as the susceptibility to be pecked at, whereas the associative genetic effect can be interpreted as the propensity to perform feather pecking. Finally, 11 significant associations between SNPs and behavioural traits were detected in the direct model, and 81 in the associative model. A role of the gene for the serotonin receptor 2C (HTR2C) on chromosome 4 was found. This supports existing evidence of a prominent involvement of the serotonergic system in the modulation of this behavioural disorder in laying hens. The genes for IL9, IL4, CCL4 and NFKB were found to be associated to plumage condition, revealing relationships between the immune system and behaviour

Reading Ability and Academic Acculturation: The Case of South African Students entering Higher Education

First-year students experience a range of challenges when transferring from secondary to higher education (HE) (cf. Darlaston-Jones et al. 2003, Leki 2006, Brinkworth et al. 2009). This is no different in South Africa, where deviating levels of preparedness for the demands of HE is a recurring theme (Slonimsky and Shalem 2005, Van Schalkwyk 2008, Scott 2009, Yeld 2009, Van Dyk 2010, Van Dyk and Coetzee-Van Rooy 2012). Weideman (2003:56) rightfully points out that the inability to understand and utilise appropriate academic discourse has a detrimental effect on academic success. Young students need to acculturate to the academic environment while adopting the academic community’s currency (Van de Poel and Gasiorek 2012a:294). With this article, we wish to contribute to the discussion by reporting on the academic language ability of one group of first-year students at a South African university, with specific reference to these students’ reading ability, on the basis of the following data: (i) individual differences in terms of learner characteristics (race, first language, gender, Grade 12 results, academic performance); (ii) self-reported reading preparedness; and (iii) reading profiles resulting from a valid and reliable academic literacy test, the Test of Academic Literacy Levels (TALL) and its Afrikaans counterpart, the Toets van Akademiese Geletterdheidsvlakke (TAG). The findings suggest that academic reading ability, as reflected in the test results, is indeed one of the salient contributors to academic success (as confirmed in the literature), regardless of social and individual differences, and that it needs to be supported in order for students to perceive their reading ability in accordance with their reading performance and be able to progress in their academic acculturation. A follow-up study will report on students’ awareness-raising about their own academic reading through the use of the validated scale for Perceived Academic Reading Preparedness (PARP) as a pedagogical tool.Keywords: Academic Acculturation, Academic Literacy, Academic Reading, Perceptions of Reading Ability, Academic Performanc

Size reduction in feed technology and methods for determining, expressing and predicting particle size: A review

Particle size of diets or ingredients plays an important role in pig growth and gut health. The way the size of particles is measured and expressed, however, is limited in explaining pig growth performance differences. This review explores new possibilities to determine, express and predict particle size. Different grinding methods, including the use of roller mills, hammer mills, multicracker and multi-stage grinding were reviewed. Roller milling tends to produce a more uniform particle size distribution (PSD) and consumes less energy, whilst hammer mills have a greater grinding capacity and a higher reduction ratio compared to roller mill. The multicracker system, a more recently developed technology, can be considered cost-effective and ensures grinding capacity. Since the effects of different grinding methods vary, multi-stage grinding, combining different grinding methods, might be a solution to obtain a defined PSD. Particle size determination techniques, including dry/wet sieving, laser diffraction, microscopy, and static/dynamic image analysis are described and compared. It is concluded that more characteristics of particles (e.g. shape, volume or surface area) should be investigated. Besides geometric mean diameter (GMD), particle size can also be expressed with parameters such as D50, D4,3 and span of PSD. Equivalent particle size (EPS) is introduced as a mean of describing the size of particles related to a functional trait of the particles. A meta-analysis was performed by collecting particle size and pig performance data from scientific studies examining the effect of recalculated EPS on pig performance (feed conversion ratio, FCR). Regression/linear modelling shows that recalculated EPS was not better than GMD in explaining pig performance differences due to the high variation among studies. Different expressions of PSD may result in different conclusions. An introduction of describing the breaking behavior of diet ingredients via mathematical models is provided. The development in breakage functions of wheat in roller milling in food preparations indicates that breakage functions are applicable in predicting the output PSD. Functions may also be extended to diet ingredients to be ground in animal feed manufacture. In feed manufacturing diagrams, particle size reduction for downstream processes (e.g. pelleting, extruding, expander processing) should be taken into account when the relationship between pig performance and particle size of diets is investigated. In conclusion, the determination, expression and prediction of particle size can be a new direction for controlling the grinding process in the feed mill to better explain its relationship with pig performance.</p

HEV inactivation assessment using viable virus

Hepatitis E is an acute icteric hepatitis caused by hepatitis E virus (HEV). HEV is transmitted by water supplies in developing countries. Recently, HEV contamination in consumption water was also observed in a developed country (France). HEV is detected in pigs and several other animal species (e.g. wild boars and deer) and it is strongly suspected to be zoonotic, HEV has also been detected in the pork production chain: in a study conducted in a grocery in the USA 11% of livers tested were HEV positive and similar data have been observed in Europe also

Interleukin-5 Potentiates Sulfidopeptide Leukotriene Production by Human Eosinophils

Interleukin-5 (IL-5) has been shown to be a selective eosinophil growth and differentiation factor. In the present study, the effect of recombinant human IL-5 on human eosinophil sulfidopeptide leukotriene production was investigated. IL-5 did not affect leukotriene synthesis in unstimulated eosinophils. However, IL-5 potentiated leukotriene synthesis by eosinophils stimulated with serum treated zymosan (STZ) or the calcium ionophore A23187 by 69% and 135%, respectively. The priming effect of IL-5 was dose dependent, with significant stimulation occurring at 1 000 U/ml for STZ and 100-1 000 U/ml for A23187. Pre-incubation with IL-5 did not increase leukotriene synthesis further

A retrospective study of high mobility group protein I(Y) as progression marker for prostate cancer determined by in situ hybridization.

In a previous study using RNA in situ hybridisation (RISH), we found a significant correlation between high mobility group protein I/Y, [HMG-I(Y)] mRNA expression and tumour stage and grade in prostate cancer patients, suggesting that HMG-I(Y) might be a potential prognostic marker in prostate cancer. However, our clinical follow-up was limited because cryopreserved material was used. Assessing the potential prognostic value of this molecule is of importance because the clinical course of prostate cancer patients remains unpredictable. Here we describe our results on paraffin-embedded archival material from a group of 102 patients undergoing radical prostatectomy. These were evaluated for the presence of HMG-I(Y) using RISH, and a follow-up of 12-92 months (average 53 months) was available. In 2 of 14 prostate cancers in which the predominant histological pattern was of Gleason grade 1-2, a high HMG-I(Y) expression was observed, whereas in 19 of 23 Gleason grade 3, and 34 of 35 Gleason grade 4-5 tumours, high HMG-I(Y) mRNA levels were detected (chi-square = 38.78, P < 0.0001). Moreover, of tumours that expressed high HMG-I(Y) levels, 25% were organ confined (T1-2), in contrast to 74.5% of the invading tumours (T3, chi-square = 15.8, P < 0.001). Furthermore, 87% of recurrent tumours showed high HMG-I(Y) expression. However, a multivariate regression analysis including Gleason grade, clinical tumour stage, HMG-I(Y) expression and prostate-specific antigen (PSA) levels showed Gleason grade as the most accurate predictor of progression. High HMG-I(Y) levels measured by RISH were indicative of a worse prognosis, albeit that additional value over the more subjective grading methods was not evident

Hepatitis E virus sequences in swine related to sequences in humans, The Netherlands.

Hepatitis E virus (HEV), a major cause of viral hepatitis in much of the developing world, has recently been detected in swine in North America and Asia, raising concern about potential for zoonotic transmission. To investigate if HEV is commonly present in swine in the Netherlands, pooled stool samples from 115 swine farms and nine individual pigs with diarrhea were assayed by reverse transcription-polymerase chain reaction (RT-PCR) amplification. HEV RNA was detected by RT-PCR and hybridization in 25 (22%) of the pooled specimens, but in none of the individual samples. RT-PCR amplification products of open reading frames 1 and 2 were sequenced, and the results were compared with published sequences of HEV genotypes from humans and swine. HEV strains from swine in the Netherlands were clustered in at least two groups, together with European and American isolates from swine and humans. Our data show that HEV in swine in the Netherlands are genetically closely related to HEV isolates from humans. Although zoonotic transmission has not been proven, these findings suggest that swine may be reservoir hosts of HEV

Hepatitis E virus RNA in commercially available porcine livers in The Netherlands

Hepatitis E virus (HEV) infections caused by genotype 3 are increasingly observed in industrialized countries, without a distinct source. High similarity between human and swine strains of HEV strongly suggest possible zoonotic transmission. It was reported previously that in 55% of Dutch pig farms HEV-excreting fattening pigs were present. In the current study, presence of HEV RNA in commercially available porcine livers was shown. We examined 62 commercially available porcine livers for HEV contamination. Before examination of livers, the most sensitive combination of tissue disruption and RNA-extraction was chosen from four disruption and seven RNA-extraction methods. Four of 62 livers were shown to be positive for HEV RNA by RT-PCR and Southern blot hybridization, and three sequences were obtained. Phylogenetic analysis showed clustering of the sequences with previously published Dutch HEV genotype 3 sequences from humans and swine. To study infectivity of possible virus, three pigs were intravenously inoculated with suspensions from commercially available HEV positive livers. Two other pigs served as high-dose or low-dose controls. The low-dose control received a comparable viral count as animals receiving inocula from commercially available livers, the high dose control received a viral count that was known to generate infection. Faecal shedding of HEV was observed in the high-dose control, indicating that the control virus was infectious. No faecal shedding of HEV was observed for the low-dose control and the three pigs that were administered the commercially available livers extracts. In conclusion, HEV RNA was found in commercially available porcine livers. inoculation of susceptible pigs with extracts from HEV-positive livers did not lead to infection, but this may be a dose-dependent effect. The risk for consumers should be investigated further