17 research outputs found
Small RNA-mediated regulation of iPS cell generation
The generation of induced pluripotent stem cells is limited by the low reprogramming efficiency of somatic cells. Here, three clusters of miRNAs are shown to enhance reprogramming efficiency by targeting the TGF-Ī² and p53 pathways, which inhibit the process
CRISPR-GRANT: a cross-platform graphical analysis tool for high-throughput CRISPR-based genome editing evaluation
Abstract Backgroud CRISPR/Cas is an efficient genome editing system that has been widely used for functional genetic studies and exhibits high potential in biomedical translational applications. Indel analysis has thus become one of the most common practices in the lab to evaluate DNA editing events generated by CRISPR/Cas. Several indel analysis tools have been reported, however, it is often required that users have certain bioinformatics training and basic command-line processing capability. Results Here, we developed CRISPR-GRANT, a stand-alone graphical CRISPR indel analysis tool, which could be easily installed for multi-platforms, including Linux, Windows, and macOS. CRISPR-GRANT offered a straightforward GUI by simple click-and-run for genome editing analysis of single or pooled amplicons and one-step analysis for whole-genome sequencing without the need of data pre-processing, making it ideal for novice lab scientists. Moreover, it also exhibited shorter run-time compared with tools currently available. Conclusion Therefore, CRISPR-GRANT is a valuable addition to the current CRISPR toolkits that significantly lower the barrier for wet-lab researchers to conduct indel analysis from large NGS datasets. CRISPR-GRANT binaries are freely available for Linux (above Ubuntu 16.04), macOS (above High Sierra 10.13) and Windows (above Windows 7) at https://github.com/fuhuancheng/CRISPR-GRANT . CRISPR-GRANT source code is licensed under the GPLv3 license and free to download and use
Cyclonic and Anticyclonic Asymmetry of Reef and Atoll Wakes in the Xisha Archipelago
A high-resolution (ā¼500 m) numerical model was used to study the reef and atoll wakes in the Xisha Archipelago (XA) during 2009. Statistical analyses of simulation data indicated strong cyclonic dominance in the mixing layer (above ā¼35 m) and weak anticyclonic dominance in the subsurface layer (35ā¼160 m) for both eddies and filaments in the XA. The intrinsic dynamical properties of the flow, such as the vertical stratification and velocity magnitude, and the terrain of reefs and atolls had a significant effect on the asymmetry. Without considering the existence of reefs and atolls, the ābackground cyclonic dominanceā generated under local planetary rotation (fā4.1Ć10ā5 sā1) and vertical stratification (with mean BruntāVƤisƤlƤ frequency N = 0.02 sā1 at 75 m) was stronger for filaments than eddies in the upper layer from 0ā¼200 m, and the larger vorticity amplitude in the cyclonic filaments could greatly enhance the cyclonic wake eddies. Furthermore, inertialācentrifugal instability induced selective destabilization of anticyclonic wake eddies in different water layers. As the Rossby number (Ro) and core vorticity (Burger number, Bu) decreased (increased) with the water depth, a more stable state was achieved for the anticyclonic wake eddies in the deeper layer. The stratification and slipping reefs and atolls also led to vertical decoupled shedding, which intensified the asymmetry
Age Related Changes in Variability of Short-Term Heart Rate and Diastolic Period
Abstract Previous studies have proved that the heart rate variability (HRV
Advanced applications of strontium-containing biomaterials in bone tissue engineering
Strontium (Sr) and strontium ranelate (SR) are commonly used therapeutic drugs for patients suffering from osteoporosis. Researches have showed that Sr can significantly improve the biological activity and physicochemical properties of materials in vitro and in vivo. Therefore, a large number of strontium containing biomaterials have been developed for repairing bone defects and promoting osseointegration. In this review, we provide a comprehensive overview of Sr-containing biomaterials along with the current state of their clinical use. For this purpose, the different types of biomaterials including calcium phosphate, bioactive glass, and polymers are discussed and provided future outlook on the fabrication of the next-generation multifunctional and smart biomaterials
Research on the mechanism and process optimization of pulsed laser descaling of Q235 steel for offshore equipment
Corrosion pervades in every field of the public domain, with a particularly pronounced impact in the marine environment. Laser descaling technology, heralded as an environmentally conscious method, is progressively gaining prominence within the maritime domain. The associated theories and procedures have incrementally assumed a central role in scholarly investigations. This study meticulously delves into the evolution of rust on the surface of the Q235 steel. By employing a salt spray test, we study the growth dynamics of the rust layer on the Q235 steel. The inquiry encompasses an examination of the growth rates in both transverse and longitudinal orientations, coupled with an analysis of the composition of rust layers. Leveraging ANSYS simulation software and thermodynamic analysis, we delve into the parameters governing the descaling process, serving as a crucial reference for subsequent experimental descaling endeavors. The results stand to offer valuable insights into the advancement of descaling technology
Alcohol-Soluble Isoindigo Derivative IIDTh-NSB as a Novel Modifier of ZnO in Inverted Polymer Solar Cells
Alcohol-soluble isoindigo
derivative with thiophene groups and sulfobetaine zwitterions, IIDTh-NSB
was applied as a novel modifier of ZnO in inverted polymer solar cells
(i-PSCs). When IIDTh-NSB (0.2 mg/mL) was spin-coated on ZnO as an
electron transport layer (ETL), power conversion efficiency (PCE)
of the PTB7:PC<sub>71</sub>BM based i-PSCs reached 8.88%, which is
a 20% improvement of that of 7.40% for the device with the ZnO-only
ETL. If ZnO was doped by IIDTh-NSB of 1.0 wt %, the PCE of 8.50% could
be achieved in the i-PSCs. Combined measurements of capacitanceāvoltage
characteristics, carrier mobility, and photocurrent density-effective
voltage characteristics revealed that incorporating IIDTh-NSB as the
modifier of ZnO by coating or doping enhanced the built-in potential,
charge carrier density and mobility, exciton dissociation, and charge
carrier extraction in the i-PSCs because of the improved interfacial
contact between the photoactive layer and ZnO as shown in water contact
angle measurements and atomic force microscopy images. Finally, impedance
spectroscopy investigation provided strong lines of evidence that
incorporating IIDTh-NSB as the modifier of ZnO led to the great enhancement
in short-circuit current density and fill factor. Furthermore, all
the devices with IIDTh-NSB as a modifier of ZnO presented better stability
than the device with ZnO-only. These findings suggest that IIDTh-NSB
is an effective and competitive material for modification of ZnO in
the i-PSCs
Safety, immunogenicity, and efficacy of an mRNA COVID-19 vaccine (RQ3013) given as the fourth booster following three doses of inactivated vaccines: a double-blinded, randomised, controlled, phase 3b trialResearch in context
Summary: Background: Heterologous vaccine schedules have been recommended to provide superior immunity and protection against emergent SARS-CoV-2 variants of concern. We aimed to evaluate the safety, immunogenicity, and efficacy of an mRNA COVID-19 vaccine RQ3013 compared with adenoviral vectored vaccine Ad5-nCoV and protein subunit vaccine ZF2001 as the fourth dose in adults primed with three doses of inactivated vaccines in China. Methods: We conducted a double-blinded, randomised, controlled, phase 3b trial among healthy Chinese adults at Lancang County, Yunnan, China. Adults who had received three doses of inactivated COVID-19 vaccines at least 6 months prior were randomly allocated (3:1:1) to receive heterologous boosters with RQ3013, Ad5-nCoV, or ZF2001. We assessed safety within 28 days post boost and the serum geometric mean titres (GMTs) of neutralising antibodies (NAbs) against the live SARS-CoV-2 omicron variant BA.5 on day 14 post-boost. We used Poisson regression to assess the vaccine efficacy against the first episode of virologically confirmed symptomatic COVID-19 occurring at least 7 days post boost. Subgroup analyses categorized by age and sex were also performed for safety and immunogenicity outcomes. This trial has been registered with the Chinese Clinical Trial Registry (ChiCTR2200065281) and is now complete. Findings: Between December 12 and December 18, 2022, a total of 1382 adults were screened, and 1250 were enrolled and randomly assigned to receive one dose of RQ3013 (nĀ =Ā 750), Ad5-nCoV (nĀ =Ā 250), or ZF2001 (nĀ =Ā 250). Although solicited adverse reactions within 28 days post boost were more frequent in the RQ3013 group (175 [23.3%]) compared to the control groups (24 [9.6%] in both the Ad5-nCOV and ZF2001 groups, PĀ Ā 0.05). On day 14 post-boost, RQ3013 (GMT 69.14, 95% CI 47.90ā99.81) elicited 4.8-fold and 5.6-fold higher concentrations of NAbs against BA.5 than did Ad5-nCoV (14.37, 7.78ā26.56) and ZF2001 (12.21, 5.13ā29.06), respectively. On day 28 post-boost, RQ3013 demonstrated a relative efficacy of 62.2% (95% CI 13.7ā83.1, PĀ =Ā 0.02) compared to Ad5-nCoV, and of 69.0% (33.5ā85.7, PĀ =Ā 0.002) compared to ZF2001. Interpretation: The administrations of all the three heterologous boosters were well tolerated. The heterologous prime-boost regimen with RQ3013 elicited superior immune responses and demonstrated better protection against symptomatic SARS-CoV-2 infections compared with Ad5-nCoV or ZF2001, supporting the use of RQ3013 as a booster vaccination in adults. Funding: Yunnan Province Science and Technology Department (grant no.202302AA310047)