Flood vulnerability, environmental land use conflicts, and conservation of soil and water: a study in the Batatais SP municipality, Brazil.

In many regions across the planet, flood events are now more frequent and intense because of climate change and improper land use, resulting in risks to the population. However, the procedures to accurately determine the areas at risk in regions influenced by inadequate land uses are still inefficient. In rural watersheds, inadequate uses occur when actual uses deviate from land capability, and are termed environmental land use conflicts. To overcome the difficulty to evaluate flood vulnerability under these settings, in this study a method was developed to delineate flood vulnerability areas in a land use conflict landscape: the Batatais municipality, located in the State of São Paulo, Brazil. The method and its implementation resorted to remote sensed data, geographic information systems and geo-processing. Satellite images and their processing provided data for environmental factors such as altitude, land use, slope, and soil class in the study area. The importance of each factor for flood vulnerability was evaluated through the analytical hierarchy process (AHP). According to the results, vast areas of medium to high flood vulnerability are located in agricultural lands affected by environmental land use conflicts. In these areas, amplified flood intensities, soil erosion, crop productivity loss and stream water deterioration are expected. The coverage of Batatais SP municipality by these vulnerable areas is so extensive (60%) that preventive and recovery measures were proposed in the context of a land consolidation-water management plan aiming flood control and soil and water conservation

Semaphorins and their receptors: Novel features of neural guidance molecules

Semaphorins were originally identified as axon guidance cues involved in the development of the nervous system. In recent years, it is emerging that they also participate in various biological systems, including physiological and pathological processes. In this review, we primarily focus on our cumulative findings for the role of semaphorins and their receptors in the regulation of the immune system, while also summarizing recent progress in the context of cardiovascular system

RhoD regulates cytoskeletal dynamics via the actin nucleation-promoting factor WASp homologue associated with actin Golgi membranes and microtubules

The Rho GTPases have mainly been studied in association with their roles in the regulation of actin filament organization. These studies have shown that the Rho GTPases are essential for basic cellular processes, such as cell migration, contraction, and division. In this paper, we report that RhoD has a role in the organization of actin dynamics that is distinct from the roles of the better-studied Rho members Cdc42, RhoA, and Rac1. We found that RhoD binds the actin nucleation–promoting factor WASp homologue associated with actin Golgi membranes and microtubules (WHAMM), as well as the related filamin A–binding protein FILIP1. Of these two RhoD-binding proteins, WHAMM was found to bind to the Arp2/3 complex, while FILIP1 bound filamin A. WHAMM was found to act downstream of RhoD in regulating cytoskeletal dynamics. In addition, cells treated with small interfering RNAs for RhoD and WHAMM showed increased cell attachment and decreased cell migration. These major effects on cytoskeletal dynamics indicate that RhoD and its effectors control vital cytoskeleton-driven cellular processes. In agreement with this notion, our data suggest that RhoD coordinates Arp2/3-dependent and FLNa-dependent mechanisms to control the actin filament system, cell adhesion, and cell migration

Diversidade genética entre procedências Cariniana legalis a partir de caracteres de crescimento das rebrotas.

Resumo

New species of Hasemania (Characiformes: Characidae) from Central Brazil, with comments on the endemism of upper rio Tocantins basin, Goiás State

Hasemania kalunga é descrita para a bacia do alto rio Tocantins, Chapada dos Veadeiros, Goiás, Brasil. A espécie nova distingue-se das suas congêneres pelo número de escamas perfuradas da linha lateral (11-21 vs. 5-9, exceto de H. crenuchoides e H. piatan), pela presença de uma mancha umeral preta e verticalmente alongada (vs. ausência, exceto de H. crenuchoides, H. nambiquara e H. piatan), e pela ausência de escamas na base da nadadeira anal (vs. presença, exceto de H. maxillaris e H. piatan), por 19 raios principais na nadadeira caudal (vs.18 em H. piatan). Ela também difere de H. crenuchoides por dados morfométricos. A ausência de uma bainha de escamas cobrindo a base da nadadeira anal, um caráter incomum em Characidae, e o endemismo da ictiofauna do alto rio Tocantins são discutidos.Hasemania kalunga is described from the upper rio Tocantins basin, Chapada dos Veadeiros, Goiás State, Brazil. The new species is distinguished from its congeners by the number of perforated lateral line scales (11-21 vs. 5-9, except from H. crenuchoides and H. piatan), by the presence of a black vertically-elongate humeral spot (vs. absent, except from H. crenuchoides, H. nambiquara, and H. piatan), and by absence of scale sheath along anal-fin base (vs. presence, except from H. maxillaris, and H. piatan), by 19 principal caudal-fin rays (vs. 18 in H. piatan). It differs also from H. crenuchoides by morphometric data. The absence of scale sheath covering the anal-fin base, an uncommon character in Characidae, and the endemism of the ichthyofauna from the upper rio Tocantins are discussed

ADAM33 gene silencing by promoter hypermethylation as a molecular marker in breast invasive lobular carcinoma

<p>Abstract</p> <p>Background</p> <p>ADAM33 protein is a member of the family of transmembrane glycoproteins composed of multidomains. ADAM family members have different activities, such as proteolysis and adhesion, making them good candidates to mediate the extracellular matrix remodelling and changes in cellular adhesion that characterise certain pathologies and cancer development. It was reported that one family member, <it>ADAM23</it>, is down-regulated by promoter hypermethylation. This seems to correlate with tumour progression and metastasis in breast cancer. In this study, we explored the involvement of ADAM33, another ADAM family member, in breast cancer.</p> <p>Methods</p> <p>First, we analysed <it>ADAM33 </it>expression in breast tumour cell lines by RT-PCR and western blotting. We also used 5-aza-2'-deoxycytidine (5azadCR) treatment and DNA bisulphite sequencing to study the promoter methylation of ADAM33 in breast tumour cell lines. We evaluated ADAM33 methylation in primary tumour samples by methylation specific PCR (MSP). Finally, <it>ADAM33 </it>promoter hypermethylation was correlated with clinicopathological data using the chi-square test and Fisher's exact test.</p> <p>Results</p> <p>The expression analysis of <it>ADAM33 </it>in breast tumour cell lines by RT-PCR revealed gene silencing in 65% of tumour cell lines. The corresponding lack of ADAM33 protein was confirmed by western blotting. We also used 5-aza-2'-deoxycytidine (5-aza-dCR) demethylation and bisulphite sequencing methodologies to confirm that gene silencing is due to <it>ADAM33 </it>promoter hypermethylation. Using MSP, we detected <it>ADAM33 </it>promoter hypermethylation in 40% of primary breast tumour samples. The correlation between methylation pattern and patient's clinicopathological data was not significantly associated with histological grade; tumour stage (TNM); tumour size; ER, PR or ERBB2 status; lymph node status; metastasis or recurrence. Methylation frequency in invasive lobular carcinoma (ILC) was 76.2% compared with 25.5% in invasive ductal carcinoma (IDC), and this difference was statistically significant (p = 0.0002).</p> <p>Conclusion</p> <p><it>ADAM33 </it>gene silencing may be related to the discohesive histological appearance of ILCs. We suggest that <it>ADAM33 </it>promoter methylation may be a useful molecular marker for differentiating ILC and IDC.</p