Genetic characterization and relatedness among autochthonous grapevine cultivars from Northeast Turkey by Simple Sequence Repeats (SSR)

25 autochthonous grapevine cultivars from Northeast Anatolia in Turkey together with two well-known standard cultivars, Cabernet Sauvignon and Merlot were fi ngerprinted using six pairs of SSR primers to assess their genetic diversity and relatedness. All six SSR primers produced successful amplifi cations and revealed DNA polymorphisms that were subsequently used to assess genetic relatedness of the cultivars. A total of 52 alleles were detected with a mean value of 8.67 alleles per locus indicating allele richness. The average expected heterozygosity (He) and observed heterozygosity (Ho) were 0.759 and 0.809, respectively. Considering the number of alleles generated, the highest number was observed in VVS2 loci (14 alleles/locus), while the lowest in VrZAG83 loci (5 alleles/locus). The Unweighted Pair-Group Method with Arithmetic mean (UPGMA) dendrogram constructed based on the SSR data yielded two main clusters. First cluster included only cv. Kibris and the second cluster included rest of the cultivars including Cabernet Sauvignon and Merlot. The results showed that SSR markers have proved to be an effi cient tool for fi ngerprinting grapevine cultivars and conducting genetic diversity studies in grapevine

Role of IRAK-M in Alcohol Induced Liver Injury

Increasing evidence suggests that innate immunity plays an important role in alcohol-induced liver injury and most studies have focused on positive regulation of innate immunity. The main objective of this study was to investigate the negative regulator of innate immunity, IL-1/Toll-like receptor (TLR) signaling pathways and interleukin receptor-associated kinase-M (IRAK-M) in alcoholic liver injury. We established an alcohol-induced liver injury model using wild type and IRAK-M deficient B6 mice and investigated the possible mechanisms. We found that in the absence of IRAK-M, liver damage by alcohol was worse with higher alanine transaminase (ALT), more immune cell infiltration and increased numbers of IFNγ producing cells. We also found enhanced phagocytic activity in CD68+ cells. Moreover, our results revealed altered gut bacteria after alcohol consumption and this was more striking in the absence of IRAK-M. Our study provides evidence that IRAK-M plays an important role in alcohol-induced liver injury and IRAK-M negatively regulates the innate and possibly the adaptive immune response in the liver reacting to acute insult by alcohol. In the absence of IRAK-M, the hosts developed worse liver injury, enhanced gut permeability and altered gut microbiota

Nambu-Goldstone Dark Matter and Cosmic Ray Electron and Positron Excess

We propose a model of dark matter identified with a pseudo-Nambu-Goldstone boson in the dynamical supersymmetry breaking sector in a gauge mediation scenario. The dark matter particles annihilate via a below-threshold narrow resonance into a pair of R-axions each of which subsequently decays into a pair of light leptons. The Breit-Wigner enhancement explains the excess electron and positron fluxes reported in the recent cosmic ray experiments PAMELA, ATIC and PPB-BETS without postulating an overdensity in halo, and the limit on anti-proton flux from PAMELA is naturally evaded.Comment: 3 figure

Experimental investigation of relationship between trauma and bisphosphonate-related osteonecrosis

Background: Bisphosphonate (BP)-related osteonecrosis of the jaw (BRONJ) disease is rare, but there are serious side-effects of BP therapy in patients. In some patients, surgery is needed and could not be cured. Astandard test is not available showing the risk of jaw osteonecrosis in routine use. The measurement of serum C.terminal telopeptide (CTX) levels has been used in diseases of BRONJ resorption and antiresorptive therapy.Aim: This paper is aimed at investigating the relationship between  traumatic procedures and presence of BP-related osteonecrosis.Materials and Methods: Thirty male Wistar albino rats with weighing 200 } 20 g were used for the experimental procedures. Rats were randomly divided into three groups each containing 10 rats as follows: Group 1 (traumatic extraction group), Group 2 (atraumatic extraction group), and Group 3 (control group). All groups, zoledronic acid (ZA) (0.3  mg/kg/week)[1] was diluted with physiological saline and given  subcutaneously for 2 months. After the 2 months, Group 1 was subjected totraumatic extraction of right first lower molars, and Group 2 was subjected to atraumatic extractions of the right first lower molars. Group 3 was subjected to no extractions as a control group. Animals were euthanized 32 days after tooth extractions, and the ZA administration protocol was maintained until the animalsf death. After sacrifice, blood samples were collected for C-terminal cross.linking telopeptide of type I collagen (CTX.1) levels, clinical and radiological findings were recorded.Results: The bone resorption marker CTX-1 showed a significant difference among the groups. CTX-1 was measured significantly higher in blood samples of Group 2 (4.15 } 0.34; P = 0.001) than Group 1 (3.77 } 0.34; P = 0.0001). No, statistically significant changes were found between Groups 1 and 2 as for clinical and radiological assessment.Conclusion: This study provides preliminary observations for the  development of an animal model of BRONJ. Although clinical and  radiological findings were not relevant, serum CTX values are reliable biochemical markers for predicting BRONJ and also atraumatic surgical procedures are important to prevent BRONJ.Key words: Bisphosphonates, bone, osteonecrosis, prevention, serum C-terminal telopeptide leve

End-to-End Joint Antenna Selection Strategy and Distributed Compress and Forward Strategy for Relay Channels

Multi-hop relay channels use multiple relay stages, each with multiple relay nodes, to facilitate communication between a source and destination. Previously, distributed space-time codes were proposed to maximize the achievable diversity-multiplexing tradeoff, however, they fail to achieve all the points of the optimal diversity-multiplexing tradeoff. In the presence of a low-rate feedback link from the destination to each relay stage and the source, this paper proposes an end-to-end antenna selection (EEAS) strategy as an alternative to distributed space-time codes. The EEAS strategy uses a subset of antennas of each relay stage for transmission of the source signal to the destination with amplify and forwarding at each relay stage. The subsets are chosen such that they maximize the end-to-end mutual information at the destination. The EEAS strategy achieves the corner points of the optimal diversity-multiplexing tradeoff (corresponding to maximum diversity gain and maximum multiplexing gain) and achieves better diversity gain at intermediate values of multiplexing gain, versus the best known distributed space-time coding strategies. A distributed compress and forward (CF) strategy is also proposed to achieve all points of the optimal diversity-multiplexing tradeoff for a two-hop relay channel with multiple relay nodes.Comment: Accepted for publication in the special issue on cooperative communication in the Eurasip Journal on Wireless Communication and Networkin

Impact of donation mode on the proportion and function of T lymphocytes in the liver

Background Liver T-cells respond to the inflammatory insult generated during organ procurement and contribute to the injury following reperfusion. The mode of liver donation alters various metabolic and inflammatory pathways but the way it affects intrahepatic T-cells is still unclear. Methods We investigated the modifications occurring in the proportion and function of T-cells during liver procurement for transplantation. We isolated hepatic mononuclear cells (HMC) from liver perfusate of living donors (LD) and donors after brain death (DBD) or cardiac death (DCD) and assessed the frequency of T-cell subsets, their cytokine secretion profile and CD8 T-cell cytotoxicity function, responsiveness to a danger associated molecular pattern (High Mobility Group Box1, HMGB1) and association with donor and recipient clinical parameters and immediate graft outcome. Results We found that T-cells in healthy human livers were enriched in memory CD8 T-cells exhibiting a phenotype of non-circulating tissue-associated lymphocytes, functionally dominated by more cytotoxicity and IFN-γ-production in DBD donors, including upon activation by HMGB1 and correlating with peak of post-transplant AST. This liver-specific pattern of CD8 T-cell was prominent in DBD livers compared to DCD and LD livers suggesting that it was influenced by events surrounding brain death, prior to retrieval. Conclusion Mode of liver donation can affect liver T-cells with increased liver damage in DBD donors. These findings may be relevant in designing therapeutic strategies aimed at organ optimization prior to transplantation

Dark Matter Model Selection and the ATIC/PPB-BETS anomaly

We argue that we may be able to sort out dark matter models in which electrons are generated through the annihilation and/or decay of dark matter, by using a fact that the initial energy spectrum is reflected in the cosmic-ray electron flux observed at the Earth even after propagation through the galactic magnetic field. To illustrate our idea we focus on three representative initial spectra: (i)monochromatic (ii)flat and (iii)double-peak ones. We find that those three cases result in significantly different energy spectra, which may be probed by the Fermi satellite in operation or an up-coming cosmic-ray detector such as CALET.Comment: 19 pages, 8 figure

Dark matter and sub-GeV hidden U(1) in GMSB models

Motivated by the recent PAMELA and ATIC data, one is led to a scenario with heavy vector-like dark matter in association with a hidden $U(1)_X$ sector below GeV scale. Realizing this idea in the context of gauge mediated supersymmetry breaking (GMSB), a heavy scalar component charged under $U(1)_X$ is found to be a good dark matter candidate which can be searched for direct scattering mediated by the Higgs boson and/or by the hidden gauge boson. The latter turns out to put a stringent bound on the kinetic mixing parameter between $U(1)_X$ and $U(1)_Y$: $\theta \lesssim 10^{-6}$. For the typical range of model parameters, we find that the decay rates of the ordinary lightest neutralino into hidden gauge boson/gaugino and photon/gravitino are comparable, and the former decay mode leaves displaced vertices of lepton pairs and missing energy with distinctive length scale larger than 20 cm for invariant lepton pair mass below 0.5 GeV. An unsatisfactory aspect of our model is that the Sommerfeld effect cannot raise the galactic dark matter annihilation by more than 60 times for the dark matter mass below TeV.Comment: 1+15 pages, 4 figures, version published in JCAP, references added, minor change

Secrecy capacity of a class of orthogonal relay eavesdropper channels

The secrecy capacity of relay channels with orthogonal components is studied in the presence of an additional passive eavesdropper node. The relay and destination receive signals from the source on two orthogonal channels such that the destination also receives transmissions from the relay on its channel. The eavesdropper can overhear either one or both of the orthogonal channels. Inner and outer bounds on the secrecy capacity are developed for both the discrete memoryless and the Gaussian channel models. For the discrete memoryless case, the secrecy capacity is shown to be achieved by a partial decode-and-forward (PDF) scheme when the eavesdropper can overhear only one of the two orthogonal channels. Two new outer bounds are presented for the Gaussian model using recent capacity results for a Gaussian multi-antenna point-to-point channel with a multi-antenna eavesdropper. The outer bounds are shown to be tight for two sub-classes of channels. The first sub-class is one in which the source and relay are clustered and the and the eavesdropper receives signals only on the channel from the source and the relay to the destination, for which the PDF strategy is optimal. The second is a sub-class in which the source does not transmit to the relay, for which a noise-forwarding strategy is optimal.Comment: Submitted to Eurasip Journal on Wireless Communications and Networking special issue on Wireless physical layer security, Dec. 2008, Revised Jun. 200