Deciphering microbiomes dozens of meters under our feet and their edaphoclimatic and spatial drivers

24 páginas.- 7 figuras.- referenciasMicrobes inhabiting deep soil layers are known to be different from their counterpart in topsoil yet remain under investigation in terms of their structure, function, and how their diversity is shaped. The microbiome of deep soils (>1 m) is expected to be relatively stable and highly independent from climatic conditions. Much less is known, however, on how these microbial communities vary along climate gradients. Here, we used amplicon sequencing to investigate bacteria, archaea, and fungi along fifteen 18-m depth profiles at 20-50-cm intervals across contrasting aridity conditions in semi-arid forest ecosystems of China's Loess Plateau. Our results showed that bacterial and fungal α diversity and bacterial and archaeal community similarity declined dramatically in topsoil and remained relatively stable in deep soil. Nevertheless, deep soil microbiome still showed the functional potential of N cycling, plant-derived organic matter degradation, resource exchange, and water coordination. The deep soil microbiome had closer taxa-taxa and bacteria-fungi associations and more influence of dispersal limitation than topsoil microbiome. Geographic distance was more influential in deep soil bacteria and archaea than in topsoil. We further showed that aridity was negatively correlated with deep-soil archaeal and fungal richness, archaeal community similarity, relative abundance of plant saprotroph, and bacteria-fungi associations, but increased the relative abundance of aerobic ammonia oxidation, manganese oxidation, and arbuscular mycorrhizal in the deep soils. Root depth, complexity, soil volumetric moisture, and clay play bridging roles in the indirect effects of aridity on microbes in deep soils. Our work indicates that, even microbial communities and nutrient cycling in deep soil are susceptible to changes in water availability, with consequences for understanding the sustainability of dryland ecosystems and the whole-soil in response to aridification. Moreover, we propose that neglecting soil depth may underestimate the role of soil moisture in dryland ecosystems under future climate scenarios.This project was supported by the Joint Key Funds of the National Natural Science Foundation of China (U21A20237), the Strategic Priority Research Program of Chinese Academy of Sciences (XDB40020202). M.D.-B. acknowledges support from TED2021-130908B-C41/AEI/10.13039/501100011033/Unión Europea NextGenerationEU/PRTR and from the Spanish Ministry of Science and Innovation for the I + D + i project PID2020-115813RA-I00 funded by MCIN/AEI/10.13039/501100011033. R.O.H. was funded by the Ramón y Cajal program of the MICINN (RYC-2017 22032), by the R&D Project of the Ministry of Science and Innovation PID2019-106004RA-I00 funded by MCIN/AEI/10.13039/501100011033, and by the European Agricultural Fund for Rural Development (EAFRD) through the “Aid to operational groups of the European Association of Innovation (AEI) in terms of agricultural productivity and sustainability,” Reference: GOPC-CA-20-0001Peer reviewe

Microbial communities in terrestrial surface soils are not widely limited by carbon

18 páginas.- 5 figuras.- referencias.- Additional supporting information can be found online in the Supporting Information section at the end of this article https://doi.org/10.1111/gcb.16765Microbial communities in soils are generally considered to be limited by carbon (C), which could be a crucial control for basic soil functions and responses of microbial heterotrophic metabolism to climate change. However, global soil microbial C limitation (MCL) has rarely been estimated and is poorly understood. Here, we predicted MCL, defined as limited availability of substrate C relative to nitrogen and/or phosphorus to meet microbial metabolic requirements, based on the thresholds of extracellular enzyme activity across 847 sites (2476 observations) representing global natural ecosystems. Results showed that only about 22% of global sites in terrestrial surface soils show relative C limitation in microbial community. This finding challenges the conventional hypothesis of ubiquitous C limitation for soil microbial metabolism. The limited geographic extent of C limitation in our study was mainly attributed to plant litter, rather than soil organic matter that has been processed by microbes, serving as the dominant C source for microbial acquisition. We also identified a significant latitudinal pattern of predicted MCL with larger C limitation at mid- to high latitudes, whereas this limitation was generally absent in the tropics. Moreover, MCL significantly constrained the rates of soil heterotrophic respiration, suggesting a potentially larger relative increase in respiration at mid- to high latitudes than low latitudes, if climate change increases primary productivity that alleviates MCL at higher latitudes. Our study provides the first global estimates of MCL, advancing our understanding of terrestrial C cycling and microbial metabolic feedback under global climate change.This study was financially supported by the National Natural Science Foundation of China (32101378) and Project funded by the China Postdoctoral Science Foundation (2022M710004)Peer reviewe

Effect of Deformation Parameters on Microstructure and Mechanical Properties of Internal Crack Healing in As-Cast 30Cr2Ni4MoV Steel

Crack defects seriously affected the quality of heavy forgings, which needed to be eliminated by forging process. In this study, the healing process of internal crack defects was studied under different deformation parameters. The internal crack was produced by drilling the sample of 30Cr2Ni4MoV steel and then compressing the sample with different deformation. The microstructure of the crack healing zone was observed using an optical microscope. Meanwhile, the static and dynamic mechanical properties of the crack healing zone were tested by room-temperature tensile tests and impact tests, respectively. The results showed that dynamic recrystallization (DRX) and grain growth were the main factors for internal crack healing. When the forging ratio (FR) was 1.5, the cracks at the corner of the void began to heal, which was caused by DRX. At FR 2.0, the DRX was completed and the center crack was completely healed. The tensile properties of crack healing zones were restored to more than 95% of the base material. As the FR increased to 2.2, the elongation increased slightly and the yield strength decreased slightly, which indicated that the grain growth played an important role in the plastic recovery and DRX played an important role in strength recovery. The dynamic mechanical properties of the crack healing zone gradually increased with the increase of deformation. Furthermore, the maximum value of impact toughness reached FR 2.0, and the recovery rate of impact toughness was above 96%. When the deformation continues to increase, the grains grew up after DRX, which made the impact energy decrease

Research on the behaviour and mechanism of void welding based on multiple scales

As the core foundation of major national equipment, large forgings have a great influence on the national economic construction, the development of national defence equipment and the development of modern cutting-edge science and technology. In the production of large forgings, welding the internal void of forgings is a technical problem that directly affects the quality of large forgings. In view of the phenomenon of void welding in large forgings, the behaviour and mechanism of void welding were deeply studied based on the stretching test and molecular dynamics simulation, combined with a lot of theoretical analysis. The results show that multi-pass stretching deformation is a kind of plastic deformation process which can eliminate void defects. When the forging ratio reaches 2.2, the void can be welded completely and the tensile strength can be restored to the level of the matrix. With the increase of compression deformation, the stress will increase sharply, especially at the grain boundary. In addition, the main void welding mechanism of 30Cr2Ni4MoV steel is the recrystallization and grain growth mechanism. Recrystallization and grain growth are of great significance for promoting the reduction of void volume and realizing metallurgical bonding of the interface

Transcriptome-Wide Identification and Characterization of Potato Circular RNAs in Response to Pectobacterium carotovorum Subspecies brasiliense Infection

Little information about the roles of circular RNAs (circRNAs) during potato-Pectobacterium carotovorum subsp. brasiliense (Pcb) interaction is currently available. In this study, we conducted the systematic identification of circRNAs from time series samples of potato cultivars Valor (susceptible) and BP1 (disease tolerant) infected by Pcb. A total of 2098 circRNAs were detected and about half (931, 44.38%) were intergenic circRNAs. And differential expression analysis detected 429 significantly regulated circRNAs. circRNAs play roles by regulating parental genes and sponging miRNAs. Gene Ontology (GO) enrichment of parental genes and miRNAs targeted mRNAs revealed that these differentially expressed (DE) circRNAs were involved in defense response (GO:0006952), cell wall (GO:0005199), ADP binding (GO:0043531), phosphorylation (GO:0016310), and kinase activity (GO:0016301), suggesting the roles of circRNAs in regulating potato immune response. Furthermore, weighted gene co-expression network analysis (WGCNA) found that circRNAs were closely related with coding-genes and long intergenic noncoding RNAs (lincRNAs). And together they were cultivar-specifically regulated to strengthen immune response of potato to Pcb infection, implying the roles of circRNAs in reprogramming disease responsive transcriptome. Our results will provide new insights into the potato-Pcb interaction and may lead to novel disease control strategy in the future

Enhancing interface stability and ionic conductivity in the designed Na3SbP0.4xS4−xOx sulfide solid electrolyte through bridging oxygen

International audienceThe all-solid-state sodium battery has emerged as a promising candidate for energy storage. However, the limited electrochemical stability of the solid electrolyte, particularly in the presence of Na metal at the anode, along with low ionic conductivity, hinders its widespread application. In this work, the design of P and O elements in Na3SbS4 solid electrolyte was investigated through a series of structural tests and characterizations. The electrochemical stability was remarkably improved in the Na/Na3SbP0.16S3.6O0.4/Na battery, exhibiting a stability of 260 h under a current of 0.1 mA cm−2. Additionally, the room temperature conductivity of Na3SbP0.16S3.6O0.4 was enhanced to 3.82 mS cm−1, maintaining a value comparable to commercial standards. The proposed design strategy provides an approach for developing sodium ion solid-state batteries with high energy density and long lifespan. The stability of the solid electrolyte interface at the Na | solid electrolyte interface proves critical for the successful assembly of all-solid-state sodium ion batteries. © 202

β-catenin nuclear translocation induced by HIF-1α overexpression leads to the radioresistance of prostate cancer

Hypoxia-inducible factor-1α (HIF-1α) is known to play crucial roles in tumor radioresistance; however, the molecular mechanisms responsible for the promotion of tumor radioresistance by HIF-1α remain unclear. β-catenin is known to be involved in the metastatic potential of prostate cancer (PCa). In this study, to investigate the role of HIF-1α and β-catenin in the radioresistance of PCa, two PCa cell lines, LNCaP and C4-2B, were grouped as follows: Negative control (no treatment), HIF-1α overexpression group (transfected with HIF-1α overexpression plasmid) and β-catenin silenced group (transfected with HIF-1α plasmids and β-catenin-shRNA). Cell proliferation, cell cycle, cell invasion and radiosensitivity were examined under normal or hypoxic conditions. In addition, radiosensitivity was examined in two mouse PCa models (the LNCaP orthotopic BALB/c-nu mice model and the C4-2B subcutaneous SCID mice model). Our results revealed that in both the LNCaP and C4-2B cells, transfection with HIF-1α overexpression plasmid led to an enhanced β-catenin nuclear translocation, while β-catenin silencing inhibited β-catenin nuclear translocation. The enhanced β-catenin nuclear translocation induced by HIF-1α overexpression resulted in an enhanced cell proliferation and cell invasion, an altered cell cycle distribution, decreased apoptosis, and improved non-homologous end joining (NHEJ) repair under normal and irradiation conditions. Similar results were observed in the animal models. HIF-1α overexpression enhanced β-catenin nuclear translocation, which led to the activation of the β-catenin/NHEJ signaling pathway and increased cell proliferation, cell invasion and DNA repair. These results thus suggest that HIF-1α overexpression promotes the radioresistance of PCa cells